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1.
Virology ; 595: 110100, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38714025

RESUMEN

Enterobacter cloacae is a clinically significant pathogen due to its multi-resistance to antibiotics, presenting a challenge in the treatment of infections. As concerns over antibiotic resistance escalate, novel therapeutic approaches have been explored. Bacteriophages, characterized by their remarkable specificity and ability to self-replicate within target bacteria, are emerging as a promising alternative therapy. In this study, we isolated and partially characterized nine lytic bacteriophages targeting E. cloacae, with two selected for comprehensive genomic analysis based on their host range and bacteriolytic activity. All identified phages exhibited a narrow host range, demonstrated stability within a temperature range of 30-60 °C, displayed pH tolerance from 3 to 10, and showed an excellent bacteriolytic capacity for up to 18 h. Notably, the fully characterized phage genomes revealed an absence of lysogenic, virulence, or antibiotic-resistance genes, positioning them as promising candidates for therapeutic intervention against E. cloacae-related diseases. Nonetheless, translating this knowledge into practical therapeutic applications mandates a deeper understanding of bacteriophage interactions within complex biological environments.


Asunto(s)
Bacteriófagos , Enterobacter cloacae , Genoma Viral , Genómica , Especificidad del Huésped , Enterobacter cloacae/virología , Enterobacter cloacae/genética , Bacteriófagos/genética , Bacteriófagos/fisiología , Bacteriófagos/clasificación , Bacteriófagos/aislamiento & purificación , Terapia de Fagos , Infecciones por Enterobacteriaceae/microbiología , Bacteriólisis
2.
Microbiol Spectr ; 10(1): e0139321, 2022 02 23.
Artículo en Inglés | MEDLINE | ID: mdl-35171008

RESUMEN

In order to establish phage therapy as a standard clinical treatment for bacterial infections, testing of every phage to ensure the suitability and safety of the biological compound is required. While some issues have been addressed over recent years, standard and easy-to-use animal models to test phages are still rare. Testing of phages in highly suitable mammalian models such as mice is subjected to strict ethical regulations, while insect larvae such as the Galleria mellonella model suffer from batch-to-batch variations and require manual operator skills to inject bacteria, resulting in unreliable experimental outcomes. A much simpler model is the nematode Caenorhabditis elegans, which feeds on bacteria, a fast growing and easy to handle organism that can be used in high-throughput screening. In this study, two clinical bacterial strains of Escherichia coli, one Klebsiella pneumoniae, and one Enterobacter cloacae strain were tested on the model system together with lytic bacteriophages that we isolated previously. We developed a liquid-based assay, in which the efficiency of phage treatment was evaluated using a scoring system based on microscopy and counting of the nematodes, allowing increasing statistical significance compared to other assays such as larvae or mice. Our work demonstrates the potential to use Caenorhabditis elegans to test the virulence of strains of Klebsiella pneumoniae, Enterobacter cloacae, and EHEC/EPEC as well as the efficacy of bacteriophages to treat or prevent infections, allowing a more reliable evaluation for the clinical therapeutic potential of lytic phages. IMPORTANCE Validating the efficacy and safety of phages prior to clinical application is crucial to see phage therapy in practice. Current animal models include mice and insect larvae, which pose ethical or technical challenges. This study examined the use of the nematode model organism C. elegans as a quick, reliable, and simple alternative for testing phages. The data show that all the four tested bacteriophages can eliminate bacterial pathogens and protect the nematode from infections. Survival rates of the nematodes increased from <20% in the infection group to >90% in the phage treatment group. Even the nematodes with poly-microbial infections recovered during phage cocktail treatment. The use of C. elegans as a simple whole-animal infection model is a rapid and robust way to study the efficacy of phages before testing them on more complex model animals such as mice.


Asunto(s)
Infecciones Bacterianas/terapia , Bacteriófagos/fisiología , Caenorhabditis elegans/virología , Terapia de Fagos , Animales , Infecciones Bacterianas/microbiología , Modelos Animales de Enfermedad , Enterobacter cloacae/fisiología , Enterobacter cloacae/virología , Escherichia coli/fisiología , Escherichia coli/virología , Humanos , Klebsiella pneumoniae/fisiología , Klebsiella pneumoniae/virología
3.
FEMS Microbiol Lett ; 368(20)2021 11 30.
Artículo en Inglés | MEDLINE | ID: mdl-34849758

RESUMEN

The prevalence of multidrug-resistant (MDR) strains has caused serious problems in the treatment of burn infections. MDR Enterobactercloacae and Enterobacterhormaechei have been defined as the causative agents of nosocomial infections in burn patients. In this situation, examination of phages side effects on human cell lines before any investigation on human or animal that can provide beneficial information about the safety of isolated phages. The aim of this study was to isolate and identify the specific bacteriophages on MDR E. cloacae and E. hormaechei isolated from burn wounds and to analyze the efficacy, cell viability and cell cytotoxicity of phages on A-375 and HFSF-PI cell lines by MTT (3-(4, 5-dimethylthiazol-2-yl)2,5-diphenyl-tetrazolium bromide) colorimetric assay and lactate dehydrogenase (LDH) release assay. Phages were isolated from urban sewage Isfahan, Iran. Enterobactercloacae strain Iau-EC100 (GenBank accession number: MZ314381) and E. hormaechei strain Iau-EHO100 (GenBank accession number: MZ348826) were sensitive to the isolated phages. Transmission electron microscopy (TEM) results revealed that PɸEn-CL and PɸEn-HO that were described had the morphologies of Myovirus and Inovirus, respectively. Overall, MTT and LDH assays showed moderate to excellent correlation in the evaluation of cytotoxicity of isolated phages. The results of MTT and LDH assays showed that, phages PɸEn-CL and PɸEn-HO had no significant toxicity effect on A375 and HFSF-PI 3 cells. Phage PɸEn-HO had a better efficacy on the two tested cell lines than other phage. Our results indicated that, there were significant differences between the two cytotoxicity assays in phage treatment compared to control.


Asunto(s)
Bacteriófagos , Quemaduras , Enterobacter cloacae , Enterobacter , Infección de Heridas , Bacteriófagos/fisiología , Quemaduras/complicaciones , Quemaduras/microbiología , Línea Celular , Enterobacter/virología , Enterobacter cloacae/virología , Humanos , Piel/microbiología , Piel/virología , Infección de Heridas/etiología , Infección de Heridas/microbiología
4.
Int J Mol Sci ; 22(22)2021 Nov 18.
Artículo en Inglés | MEDLINE | ID: mdl-34830335

RESUMEN

The food industry is still searching for novel solutions to effectively ensure the microbiological safety of food, especially fresh and minimally processed food products. Nowadays, the use of bacteriophages as potential biological control agents in microbiological food safety and preservation is a promising strategy. The aim of the study was the isolation and comprehensive characterization of novel bacteriophages with lytic activity against saprophytic bacterial microflora of minimally processed plant-based food products, such as mixed leaf salads. From 43 phages isolated from municipal sewage, four phages, namely Enterobacter phage KKP 3263, Citrobacter phage KKP 3664, Enterobacter phage KKP 3262, and Serratia phage KKP 3264 have lytic activity against Enterobacter ludwigii KKP 3083, Citrobacter freundii KKP 3655, Enterobacter cloacae KKP 3082, and Serratia fonticola KKP 3084 bacterial strains, respectively. Transmission electron microscopy (TEM) and whole-genome sequencing (WGS) identified Enterobacter phage KKP 3263 as an Autographiviridae, and Citrobacter phage KKP 3664, Enterobacter phage KKP 3262, and Serratia phage KKP 3264 as members of the Myoviridae family. Genome sequencing revealed that these phages have linear double-stranded DNA (dsDNA) with sizes of 39,418 bp (KKP 3263), 61,608 bp (KKP 3664), 84,075 bp (KKP 3262), and 148,182 bp (KKP 3264). No antibiotic resistance genes, virulence factors, integrase, recombinase, or repressors, which are the main markers of lysogenic viruses, were annotated in phage genomes. Serratia phage KKP 3264 showed the greatest growth inhibition of Serratia fonticola KKP 3084 strain. The use of MOI 1.0 caused an almost 5-fold decrease in the value of the specific growth rate coefficient. The phages retained their lytic activity in a wide range of temperatures (from -20 °C to 50 °C) and active acidity values (pH from 4 to 11). All phages retained at least 70% of lytic activity at 60 °C. At 80 °C, no lytic activity against tested bacterial strains was observed. Serratia phage KKP 3264 was the most resistant to chemical factors, by maintaining high lytic activity across a broader range of pH from 3 to 11. The results indicated that these phages could be a potential biological control agent against saprophytic bacterial microflora of minimally processed plant-based food products.


Asunto(s)
Bacteriófagos/genética , Citrobacter freundii/virología , Enterobacter cloacae/virología , Inocuidad de los Alimentos/métodos , Genoma Viral , Myoviridae/genética , Serratia/virología , Bacteriólisis/fisiología , Bacteriófagos/clasificación , Bacteriófagos/aislamiento & purificación , Agentes de Control Biológico/clasificación , Agentes de Control Biológico/aislamiento & purificación , ADN Viral/genética , Microbiología de Alimentos/métodos , Embalaje de Alimentos/métodos , Conservación de Alimentos/métodos , Humanos , Myoviridae/clasificación , Myoviridae/aislamiento & purificación , Filogenia , Aguas del Alcantarillado/virología , Verduras/microbiología
5.
Viruses ; 13(7)2021 07 15.
Artículo en Inglés | MEDLINE | ID: mdl-34372577

RESUMEN

A novel Enterobacter cloacae phage, EC151, was isolated and characterized. Electron microscopy revealed that EC151 has a siphovirus-like virion morphology. The EC151 nucleotide sequence shows limited similarity to other phage genomes deposited in the NCBI GenBank database. The size of the EC151 genome is 60,753 bp and contains 58 putative genes. Thirty-nine of them encode proteins of predicted function, 18 are defined as hypothetical proteins, and one ORF identifies as the tRNA-Ser-GCT-encoding gene. Six ORFs were predicted to be members of the deazaguanine DNA modification pathway, including the preQ0 transporter. Comparative proteomic phylogenetic analysis revealed that phage EC151 represents a distinct branch within a group of sequences containing clades formed by members of the Seuratvirus, Nonagvirus, and Vidquintavirus genera. In addition, the EC151 genome showed gene synteny typical of the Seuratvirus, Nonagvirus, and Nipunavirus phages. The average genetic distances of EC151/Seuratvirus, EC151/Nonagvirus, and EC151/Vidquintavirus are approximately equal to those between the Seuratvirus, Nonagvirus, and Vidquintavirus genera (~0.7 substitutions per site). Therefore, EC151 may represent a novel genus within the Siphoviridae family. The origin of the deazaguanine DNA modification pathway in the EC151 genome can be traced to Escherichia phages from the Seuratvirus genus.


Asunto(s)
Bacteriófagos/genética , Enterobacter cloacae/genética , Enterobacter cloacae/virología , ADN Viral/genética , Enterobacter cloacae/metabolismo , Genoma Viral/genética , Genómica , Especificidad del Huésped , Filogenia , Proteómica , Siphoviridae/genética , Proteínas Virales/genética , Virión/metabolismo
6.
APMIS ; 129(8): 461-469, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-33950561

RESUMEN

Enterobacter cloacae (E. cloacae) is an emerging nosocomial pathogen that had acquired antibiotic resistance against multiple classes of antibiotics. The current study was aimed to isolate and characterize lytic bacteriophage against E. cloacae. The bacteriophage EBP was isolated from a sewage water sample using E. cloacae as a host strain by double-layer agar technique. EBP was found stabile at a wide range of temperatures (25, 37, 60, and 80°C) and pH (5, 6, 7, 8, and 9) with antibacterial activity up to 24 h of infection. The latent period of EBP was 20 min with a burst size of 252 phages per cell. It showed a narrow host range and infected 12/21 (57%) isolates of E. cloacae tested. It has helical symmetry with a head size of 105 and 120 nm long tail with contractile sheath. The EBP has 179.1 kb long double-stranded DNA genome with 44.8% GC content. Majority of identified ORFs (187/281) were encoding putative proteins with unknown function. Necessary replication enzymes, structural proteins, and lytic enzymes were detected in the genome of EBP. Phylogenetic analysis revealed that EBP closely resembles with Coronobacter phage vB_CsaM_IeN, vB_CsaM_IeE, vB_CsaM_IeB, and Citrobacter phage Margaery. Based on electron microscopy and molecular characterization, EBP was classified as a Myoviridae phage.


Asunto(s)
Bacteriófagos/aislamiento & purificación , Genoma Viral , Myoviridae/aislamiento & purificación , Bacteriófagos/clasificación , Bacteriófagos/genética , Bacteriófagos/fisiología , Enterobacter cloacae/virología , Tamaño del Genoma , Especificidad del Huésped , Myoviridae/clasificación , Myoviridae/genética , Myoviridae/fisiología , Filogenia , Aguas del Alcantarillado/virología
7.
J Am Chem Soc ; 142(46): 19446-19450, 2020 11 18.
Artículo en Inglés | MEDLINE | ID: mdl-33166120

RESUMEN

Pseudaminic acid (Pse), a unique carbohydrate in surface-associated glycans of pathogenic bacteria, has pivotal roles in virulence. Owing to its significant antigenicity and absence in mammals, Pse is considered an attractive target for vaccination or antibody-based therapies against bacterial infections. However, a specific and universal probe for Pse, which could also be used in immunotherapy, has not been reported. In a prior study, we used a tail spike protein from a bacteriophage (ΦAB6TSP) that digests Pse-containing exopolysaccharide (EPS) from Acinetobacter baumannii strain 54149 (Ab-54149) to form a glycoconjugate for preparing anti-Ab-54149 EPS serum. We report here that a catalytically inactive ΦAB6TSP (I-ΦAB6TSP) retains binding ability toward Pse. In addition, an I-ΦAB6TSP-DyLight-650 conjugate (Dy-I-ΦAB6TSP) was more sensitive in detecting Ab-54149 than an antibody purified from anti- Ab-54149 EPS serum. Dy-I-ΦAB6TSP also cross-reacted with other pathogenic bacteria containing Pse on their surface polysaccharides (e.g., Helicobacter pylori and Enterobacter cloacae), revealing it to be a promising probe for detecting Pse across bacterial species. We also developed a detection method that employs I-ΦAB6TSP immobilized on microtiter plate. These results suggested that the anti-Ab-54149 EPS serum would exhibit cross-reactivity to Pse on other organisms. When this was tested, this serum facilitated complement-mediated killing of H. pylori and E. cloacae, indicating its potential as a cross-species antibacterial agent. This work opens new avenues for diagnosis and treatment of multidrug resistant (MDR) bacterial infections.


Asunto(s)
Antibacterianos/química , Infecciones Bacterianas/terapia , Bacteriófagos/química , Azúcares Ácidos/química , Proteínas de la Cola de los Virus/química , Acinetobacter baumannii/química , Antibacterianos/farmacología , Anticuerpos/química , Farmacorresistencia Bacteriana Múltiple , Enterobacter cloacae/virología , Glicoconjugados/química , Glicósido Hidrolasas , Helicobacter pylori/virología , Polisacáridos/química , Suero/química , Azúcares Ácidos/metabolismo , Azúcares Ácidos/uso terapéutico , Proteínas de la Cola de los Virus/metabolismo
8.
Arch Virol ; 165(8): 1929-1932, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32514690

RESUMEN

Phages, viruses targeting bacteria, have potential therapeutic applications in the control of infections with antibiotic-resistant bacteria. In this study, an Enterobacter cloacae phage, Ec_L1, was isolated from sewage sludge samples collected from a hospital. The genome of phage Ec_L1 consists of 51,894 bp with 48.24% G+C content. Nineteen of the 85 putative proteins encoded by this phage have known functions, and no rRNA or tRNA genes were found. Comparative analysis of genome sequences suggested that phage Ec_L1 should be considered a member of the subfamily Tunavirinae, which includes T1-like phages. According to the International Committee on Taxonomy of Viruses (ICTV), phage Ec_L1 is the type member of the new genus "Eclunavirus", whose name was derived from Ec_L1.


Asunto(s)
Bacteriófagos/genética , Enterobacter cloacae/virología , Genoma Viral/genética , Composición de Base/genética , Sistemas de Lectura Abierta/genética , Análisis de Secuencia/métodos
9.
Food Microbiol ; 86: 103330, 2020 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-31703878

RESUMEN

Pickle is a type of mildly lactic acid fermented vegetable and is a traditional dish favored in China, Japan, and Korea. Corruption of spoilage bacteria and accumulation of nitrite during vegetable fermentation are common problems that affect the pickle industry and consumer health. In this work, cucumber juice was used as a vegetable model to study the dominant mesophilic aerobic bacteria (MAB) producing nitrite during pickle fermentation. Virulent phages infecting the dominant MABs combined with Lactobacillus plantarum M6 were used to control these bacteria. Enterobacter cloacae and Pseudomonas fluorescens are the dominant MABs in the fermentation of cucumber juice containing 4% or 8% NaCl, with isolation percentages reaching 30.6% and 23.1%, respectively. Virulent phages PspYZU5415 and EcpYZU01 were isolated using P. fluorescens J5415 and E. cloacae J01 as the host bacteria, respectively. These two phages show a broad host range and strong lytic activity, and their genomes contain no toxins and antibiotic resistance genes. PspYZU5415 and EcpYZU01 were combined into a cocktail (designated as Phage MIX) that effectively inhibits the growth of E. cloacae and P. fluorescens in cucumber juice with different salt concentrations. PhageMIX combined with L. plantarum M6 decreased the counts of P. mendocina and E. cloacae to undetectable levels at 48 h during the fermentation of cucumber juice artificially contaminated with P. mendocina and E. cloacae. In addition, nitrite content increased to 11.3 mg/L at 20 h and then degraded completely at 36 h. By contrast, P. mendocina and E. cloacae remained in the groups without PhageMIX during fermentation (0-48 h). Nitrite content rapidly increased to 65.7 mg/L at 12 h and then decreased to 21.6 mg/L at 48 h in the control group. This study suggests that PhageMIX combined with lactic acid bacterial strains can be used as an ecological starter for controlling the dominant MABs P. mendocina and E. cloacae and for reducing nitrate production during the early stage of pickle fermentation.


Asunto(s)
Bacteriófagos/fisiología , Bacteriófagos/patogenicidad , Cucumis sativus/microbiología , Enterobacter cloacae/virología , Microbiología de Alimentos/métodos , Pseudomonas fluorescens/virología , Verduras/microbiología , Aerobiosis , Bacteriófagos/genética , Bacteriófagos/aislamiento & purificación , Cucumis sativus/metabolismo , Enterobacter cloacae/metabolismo , Fermentación , Alimentos Fermentados/microbiología , Especificidad del Huésped , Lactobacillus plantarum/metabolismo , Nitritos/metabolismo , Pseudomonas fluorescens/metabolismo
10.
BMC Res Notes ; 12(1): 607, 2019 Sep 23.
Artículo en Inglés | MEDLINE | ID: mdl-31547886

RESUMEN

OBJECTIVE: Research suggests human norovirus binding to histo-blood group antigen (HBGA)-like molecules on enteric bacteria may enhance viral pathogenesis; however, the properties of these bacterial ligands are not well known. Previous work identified, but did not characterize, seven norovirus-binding bacteria. To further examine this bacteria-virus binding interaction, enteric bacteria were analyzed via Western blot with anti-HBGA antibodies and lectins targeting HBGA-associated sugar components. Virus overlay assays using capsids from six different human norovirus strains further identified responsible ligands and strain dependent binding properties. RESULTS: Each bacterial species possessed varying degrees of HBGA-like activity, and lectin binding further elucidated potential sugar residues involved (N-acetyl-galactosamine, α-D-galactose or α-L-fucose). Both GI and GII norovirus capsids bound specific bacterial ligand sizes, and generally corresponded to anti-HBGA Western blot patterns. A 35-kDa band reacted with all HBGA antibodies, bound all six of the noroviruses tested, and had a high affinity for the lectins. Collectively, this work characterizes the varying carbohydrate residues potentially responsible for norovirus-bacteria interactions and provides a basis for future ligand identification.


Asunto(s)
Proteínas Bacterianas/metabolismo , Enterobacter cloacae/virología , Interacciones Microbianas/genética , Norovirus/genética , Staphylococcus aureus/virología , Acetilgalactosamina/química , Acetilgalactosamina/metabolismo , Anticuerpos Antibacterianos/química , Anticuerpos Antibacterianos/metabolismo , Bacillus/aislamiento & purificación , Bacillus/virología , Proteínas Bacterianas/química , Proteínas Bacterianas/genética , Antígenos de Grupos Sanguíneos/química , Antígenos de Grupos Sanguíneos/genética , Antígenos de Grupos Sanguíneos/metabolismo , Western Blotting , Cápside/química , Cápside/metabolismo , Enterobacter cloacae/aislamiento & purificación , Fucosa/química , Fucosa/metabolismo , Galactosa/química , Galactosa/metabolismo , Microbioma Gastrointestinal/genética , Expresión Génica , Humanos , Klebsiella/aislamiento & purificación , Klebsiella/virología , Lectinas/química , Lectinas/metabolismo , Ligandos , Imitación Molecular , Norovirus/metabolismo , Unión Proteica , Staphylococcus aureus/aislamiento & purificación
11.
Folia Microbiol (Praha) ; 64(1): 101-111, 2019 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-30090964

RESUMEN

Biofilm is involved in a variety of infections, playing a critical role in the chronicity of infections. Enterobacter cloacae is a biofilm-forming and multi-drug-resistant (MDR) nosocomial pathogen leading to significant morbidity and mortality. This study aimed at isolation of a bacteriophage against MDR clinical strain of E. cloacae and its efficacy against bacterial planktonic cells and biofilm. A bacteriophage MJ2 was successfully isolated from wastewater and was characterized. The phage exhibited a wide range of thermal and pH stability and demonstrated considerable adsorption to host bacteria in the presence of CaCl2 or MgCl2. Transmission electron microscopy (TEM) showed MJ2 head as approximately 62 and 54 nm width and length, respectively. It had a short non-contractile tail and was characterized as a member of the family Podoviridae [order Caudovirales]. The phage MJ2 was found to possess 11 structural proteins (12-150 kDa) and a double-stranded DNA genome with an approximate size of 40 kb. The log-phase growth of E. cloacae both in biofilm and suspension was significantly reduced by the phage. The E. cloacae biofilm was formed under different conditions to evaluate the efficacy of MJ2 phage. Variable reduction pattern of E. cloacae biofilm was observed while treating it for 4 h with MJ2, i.e., biofilm under static conditions. The renewed media with intervals of 24, 72, and 120 h showed biomass decline of 2.8-, 3-, and 3.5-log, respectively. Whereas, the bacterial biofilm formed with dynamic conditions with refreshing media after 24, 72, and 120 h demonstrated decline in growth at 2.5-, 2.6-, and 3.3-log, respectively. It was, therefore, concluded that phage MJ2 possessed considerable inhibitory effects on MDR E. cloacae both in planktonic and biofilm forms.


Asunto(s)
Biopelículas/crecimiento & desarrollo , Farmacorresistencia Bacteriana Múltiple , Enterobacter cloacae/virología , Podoviridae/aislamiento & purificación , Podoviridae/fisiología , Cloruro de Calcio/farmacología , ADN Viral , Tamaño del Genoma , Genoma Viral/genética , Especificidad del Huésped , Concentración de Iones de Hidrógeno , Cloruro de Magnesio/farmacología , Viabilidad Microbiana , Peso Molecular , Podoviridae/ultraestructura , Temperatura , Proteínas Virales/química , Acoplamiento Viral/efectos de los fármacos , Aguas Residuales/virología
12.
J Microbiol ; 56(12): 917-925, 2018 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-30361974

RESUMEN

In this study, we sought to isolate Salmonella Enteritidis-specific lytic bacteriophages (phages), and we found a lytic phage that could lyse not only S. Enteritidis but also other Gramnegative foodborne pathogens. This lytic phage, SS3e, could lyse almost all tested Salmonella enterica serovars as well as other enteric pathogenic bacteria including Escherichia coli, Shigella sonnei, Enterobacter cloacae, and Serratia marcescens. This SS3e phage has an icosahedral head and a long tail, indicating belong to the Siphoviridae. The genome was 40,793 base pairs, containing 58 theoretically determined open reading frames (ORFs). Among the 58 ORFs, ORF49, and ORF25 showed high sequence similarity with tail spike protein and lysozyme-like protein of Salmonella phage SE2, respectively, which are critical proteins recognizing and lysing host bacteria. Unlike SE2 phage whose host restricted to Salmonella enterica serovars Enteritidis and Gallinarum, SS3e showed broader host specificity against Gram-negative enteric bacteria; thus, it could be a promising candidate for the phage utilization against various Gram-negative bacterial infection including foodborne pathogens.


Asunto(s)
Microbioma Gastrointestinal , Especificidad del Huésped , Fagos de Salmonella/genética , Fagos de Salmonella/fisiología , Salmonella enteritidis/virología , Animales , República Popular Democrática de Corea , Enterobacter cloacae/virología , Enterobacteriaceae/virología , Escherichia coli/virología , Granjas , Enfermedades Transmitidas por los Alimentos/microbiología , Genoma Viral , Sistemas de Lectura Abierta/genética , Filogenia , Aves de Corral , Fagos de Salmonella/clasificación , Fagos de Salmonella/aislamiento & purificación , Salmonella enterica/virología , Análisis de Secuencia de ADN , Aguas del Alcantarillado/virología , Shigella sonnei/efectos de los fármacos
13.
BMC Microbiol ; 18(1): 97, 2018 08 31.
Artículo en Inglés | MEDLINE | ID: mdl-30170558

RESUMEN

BACKGROUND: Phage therapy is the therapeutic use of bacteriophages to treat highly drug resistant bacterial infections. The current surge in bacteriophage therapy is motivated mainly because of the emergence of antibiotic-resistant bacteria in clinics. This study evaluated the therapeutic potential of three bacteriophages isolated against Escherichia coli ec311, Klebsiella pneumoniae kp235 and Enterobacter cloacae el140 strains using Galleria mellonella. The in vitro activity of three different phages belonging to Podoviridae and Myoviridae families was studied by the double agar overlay method against multi-drug resistant strains. Larval survivability studies were performed to evaluate the potential of phages against infection using G. mellonella. RESULTS: All the three phages were found to have potential to infect the host bacterial strains. For in vivo studies it was observed that E. coli and E. cloacae infected larvae, should be treated with three phage doses (20 µL, 104 PFU/mL) at 6 h interval to achieve 100% survival rate. But in the case of K. pneumoniae, a single phage dose treatment showed promising outcome. When mixed bacterial infections (all three bacterial cultures at 108 CFU/mL) were tested, minimum of four doses of phage cocktail (three phages) at 6 h interval was necessary to recover the larvae. All the results were confirmed by enumerating bacteria from the larvae. CONCLUSION: Our data shows that although in vitro studies showed high infectivity of phages, for in vivo models multiple phage doses were required for effective treatment.


Asunto(s)
Infecciones Bacterianas/terapia , Bacteriófagos/fisiología , Bacterias Gramnegativas/patogenicidad , Bacterias Gramnegativas/virología , Terapia de Fagos , Animales , Infecciones Bacterianas/microbiología , Bacteriófagos/clasificación , Bacteriófagos/aislamiento & purificación , Modelos Animales de Enfermedad , Farmacorresistencia Bacteriana Múltiple , Enterobacter cloacae/patogenicidad , Enterobacter cloacae/virología , Escherichia coli/patogenicidad , Escherichia coli/virología , Klebsiella pneumoniae/patogenicidad , Klebsiella pneumoniae/virología , Larva , Lepidópteros , Myoviridae/clasificación , Myoviridae/aislamiento & purificación , Myoviridae/fisiología , Podoviridae/clasificación , Podoviridae/aislamiento & purificación , Podoviridae/fisiología , Tasa de Supervivencia
14.
J Basic Microbiol ; 56(10): 1117-1123, 2016 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-27194637

RESUMEN

Bacteriophages (phages) represent a potential alternative for combating multi-drug resistant bacteria. Because of their narrow host range and the ever emergence of novel pathogen variants the continued search for phages is a prerequisite for optimal treatment of bacterial infections. Here we performed an ad hoc survey in the surroundings of a University hospital for the presence of phages with therapeutic potential. To this end, 16 aquatic samples of different origins and locations were tested simultaneously for the presence of phages with lytic activity against five current, but distinct strains each from the ESKAPE-group (i.e., Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa, and Enterobacter cloacae). Phages could be isolated for 70% of strains, covering all bacterial species except S. aureus. Apart from samples from two lakes, freshwater samples were largely devoid of phages. By contrast, one liter of hospital effluent collected at a single time point already contained phages active against two-thirds of tested strains. In conclusion, phages with lytic activity against nosocomial pathogens are unevenly distributed across environments with the prime source being the immediate hospital vicinity.


Asunto(s)
Acinetobacter baumannii/virología , Bacteriófagos/aislamiento & purificación , Enterobacter cloacae/virología , Enterococcus faecium/virología , Klebsiella pneumoniae/virología , Terapia de Fagos/métodos , Pseudomonas aeruginosa/virología , Staphylococcus aureus/virología , Farmacorresistencia Bacteriana Múltiple , Especificidad del Huésped , Aguas Residuales/virología
15.
Virus Res ; 211: 199-208, 2016 Jan 04.
Artículo en Inglés | MEDLINE | ID: mdl-26541317

RESUMEN

The objective of this study was to compare the dynamics of three previously isolated phages for Enterobacter cloacae in order to evaluate their ability to treat urinary tract infections (UTI). The phages genomes, survival, host range, were characterized, and the host-phage dynamics was determined in culture medium and urine samples. The presence of prophages in bacteria, host recovery and development of resistance to phage after treatment was also evaluated. The growth of the E. cloacae was inhibited by the three phages, resulting in a decrease of ≈3 log. The use of cocktails with two or three phages was significantly more effective (decrease of ≈4 log). In urine, the inactivation was still effective (≈2 log). Both phages were considered safe to inactivate the bacteria (no integrase and toxin codifying genes). Some bacteria remained viable in the presence of the phages, but their colonies were smaller than those of the non-treated control and were visible only after 5 days of incubation (visible after 24h in the control). A high bacterial inactivation efficiency with phage cocktails combined with the safety of the phages and their long periods of survival, even in urine samples, paves the way for depth studies, especially in vivo studies, to control urinary tract infection and to overcome the development of resistances by the nosocomial bacterium E. cloacae.


Asunto(s)
Bacteriófagos/fisiología , Enterobacter cloacae/crecimiento & desarrollo , Enterobacter cloacae/virología , Viabilidad Microbiana , Orina/microbiología , Bacteriófagos/genética , Enterobacter cloacae/genética , Humanos
16.
Int J Med Microbiol ; 294(2-3): 115-21, 2004 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-15493821

RESUMEN

Shiga toxins (Stx) represent a group of bacterial toxins that are involved in human and animal disease. Stx are mainly produced by Escherichia coli isolated from human and non-human sources, Shigella dysenteriae type 1, and sporadically, by Citrobacter freundii, Enterobacter cloacae and Shigella flexneri. The genes encoding Stx are encoded in the genome of heterogeneous lambdoid prophages (Stx-converting bacteriophages; Stx-phages). They are located in a similar position in the late region of the prophage genome and stx is under control of phage genes. Therefore, induction of Stx-converting prophages triggers increased production of Stx. Following induction, Stx-phages can infect other bacteria in vivo and in vitro. Stx-phages may be considered to represent highly mobile genetic elements that play an important role in the expression of Stx, in horizontal gene transfer, and hence in genome diversification.


Asunto(s)
Bacteriófagos/genética , Citrobacter freundii/virología , Enterobacter cloacae/virología , Escherichia coli/virología , Profagos/genética , Toxinas Shiga/genética , Shigella/virología , Animales , Bacteriófagos/fisiología , Escherichia coli/genética , Regulación Viral de la Expresión Génica , Transferencia de Gen Horizontal , Variación Genética , Humanos , Lisogenia , Profagos/fisiología , Shigella/genética , Shigella dysenteriae/genética , Shigella dysenteriae/virología , Shigella flexneri/genética , Shigella flexneri/virología , Activación Viral , Integración Viral
17.
J Econ Entomol ; 96(3): 555-63, 2003 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-12852588

RESUMEN

The chitinase gene-transformed strain KPM-007E/chi of Enterobacter cloacae was vitally entrapped in sodium alginate gel beads with its specific virulent bacteriophage EcP-01 to provide a new method for microbially digesting chitinous peritrophic membranes of phytophagous ladybird beetles Epilachna vigintioctopunctata. First, chitinase SH1 from a gram-positive bacterium Kurthia zopfii was overproduced by Escherichia coli cells and purified by affinity column chromatography. The purified enzyme effectively digested peritrophic membranes dissected from the ladybird beetles to expose epithelial tissues beneath the peritrophic membrane, and the beetles that had ingested chitinase after submergence in chitinase solution had considerably reduced their feeding on tomato leaves. KPM-007E/chi, entrapped in the alginate beads, released the chitinase. More chitinase was released when KPM-007E/chi was present with their specific virulent bacteriophage EcP-01 in the beads because of lysis of bacterial cells infected with the bacteriophages. This chitinase release from the microbial beads (containing KPM-007E/chi and EcP-01) was sufficient to digest the peritrophic membrane as well as to suppress feeding of bead-sprayed tomato leaves by the ladybird beetles. A daily supply of tomato leaves treated with the microbial beads considerably suppressed leaf feeding and oviposition by the ladybird beetles, suggesting a possible application of chitinase-secreting bacteria for suppressing herbivorous insect pests.


Asunto(s)
Quitinasas/metabolismo , Escarabajos/fisiología , Enterobacter cloacae/enzimología , Enterobacter cloacae/virología , Conducta Alimentaria , Control de Insectos/métodos , Oviposición , Solanum lycopersicum/parasitología , Alginatos , Animales , Bacteriófagos/fisiología , Quitinasas/genética , Enterobacter cloacae/genética , Geles , Microesferas , Hojas de la Planta , Transformación Bacteriana
18.
Lett Appl Microbiol ; 36(6): 362-71, 2003.
Artículo en Inglés | MEDLINE | ID: mdl-12753243

RESUMEN

AIMS: With concern surrounding the environmental impact of chemical tracers on the aquatic environment, this paper presents the initial evaluation of biotracers used to determine the effluent retention time, an important performance indicator, in a Free Water Surface Constructed Wetland. METHODS AND RESULTS: Production of the biotracers, coliphage MS2, and the bacteriophage of Enterobacter cloacae and antibiotic resistant endospores of Bacillus globigii is described in detail. Their subsequent use in three separate tracer experiments - January, March and June (2000) - revealed the variability of retention time with respect to effluent flow. The biotracer MS2 showed the constructed wetland had a retention time of 8-9 h at a mean discharge of 0.9 l s-1, increasing to 10-12 h at a mean discharge 0.3 l s-1. A similar retention of 9-10 h at a mean discharge of 0.3 l s-1 was calculated for the Ent. cloacae phage. In contrast, use of endospores revealed considerably longer retention times at these mean discharge rates; 12-24 h and 36-48 h, respectively. CONCLUSION: Biotracers could provide a useful and environmentally friendly technique to monitor effluent retention in constructed wetlands. At this stage the phage tracers appear particularly promising due to ease of isolation and recovery. SIGNIFICANCE AND IMPACT OF THE STUDY: Initial results are encouraging and have highlighted the potential of biotracers as alternatives to chemical tracers, even in microbially-rich waters.


Asunto(s)
Ecosistema , Agua Dulce/microbiología , Agua Dulce/virología , Aguas del Alcantarillado , Eliminación de Residuos Líquidos/métodos , Bacillus/efectos de los fármacos , Bacillus/genética , Bacillus/aislamiento & purificación , Bacillus/fisiología , Farmacorresistencia Bacteriana , Enterobacter cloacae/virología , Monitoreo del Ambiente/métodos , Levivirus/aislamiento & purificación , Ácido Nalidíxico/farmacología , Rifampin/farmacología , Esporas Bacterianas/efectos de los fármacos
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