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1.
J Biol Chem ; 296: 100223, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33449875

RESUMEN

Cytochrome P450 (P450) 3A4 is the enzyme most involved in the metabolism of drugs and can also oxidize numerous steroids. This enzyme is also involved in one-half of pharmacokinetic drug-drug interactions, but details of the exact mechanisms of P450 3A4 inhibition are still unclear in many cases. Ketoconazole, clotrimazole, ritonavir, indinavir, and itraconazole are strong inhibitors; analysis of the kinetics of reversal of inhibition with the model substrate 7-benzoyl quinoline showed lag phases in several cases, consistent with multiple structures of P450 3A4 inhibitor complexes. Lags in the onset of inhibition were observed when inhibitors were added to P450 3A4 in 7-benzoyl quinoline O-debenzylation reactions, and similar patterns were observed for inhibition of testosterone 6ß-hydroxylation by ritonavir and indinavir. Upon mixing with inhibitors, P450 3A4 showed rapid binding as judged by a spectral shift with at least partial high-spin iron character, followed by a slower conversion to a low-spin iron-nitrogen complex. The changes were best described by two intermediate complexes, one being a partial high-spin form and the second another intermediate, with half-lives of seconds. The kinetics could be modeled in a system involving initial loose binding of inhibitor, followed by a slow step leading to a tighter complex on a multisecond time scale. Although some more complex possibilities cannot be dismissed, these results describe a system in which conformationally distinct forms of P450 3A4 bind inhibitors rapidly and two distinct P450-inhibitor complexes exist en route to the final enzyme-inhibitor complex with full inhibitory activity.


Asunto(s)
Clotrimazol/farmacología , Inhibidores del Citocromo P-450 CYP3A/farmacología , Citocromo P-450 CYP3A/química , Indinavir/farmacología , Itraconazol/farmacología , Cetoconazol/farmacología , Ritonavir/farmacología , Esteroide Hidroxilasas/antagonistas & inhibidores , Animales , Biocatálisis , Clonación Molecular , Clotrimazol/química , Citocromo P-450 CYP3A/genética , Citocromo P-450 CYP3A/metabolismo , Inhibidores del Citocromo P-450 CYP3A/química , Pruebas de Enzimas , Escherichia coli/genética , Escherichia coli/metabolismo , Expresión Génica , Vectores Genéticos/química , Vectores Genéticos/metabolismo , Humanos , Hidroxiquinolinas/síntesis química , Hidroxiquinolinas/metabolismo , Indinavir/química , Itraconazol/química , Cetoconazol/química , Cinética , Ratas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Ritonavir/química , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/genética , Esteroide Hidroxilasas/metabolismo
2.
J Microbiol Biotechnol ; 30(11): 1750-1759, 2020 Nov 28.
Artículo en Inglés | MEDLINE | ID: mdl-32958729

RESUMEN

The characterization of cytochrome P450 CYP125A13 from Streptomyces peucetius was conducted using cholesterol as the sole substrate. The in vitro enzymatic assay utilizing putidaredoxin and putidaredoxin reductase from Pseudomonas putida revealed that CYP125A13 bound cholesterol and hydroxylated it. The calculated KD value, catalytic conversion rates, and Km value were 56.92 ± 11.28 µM, 1.95 nmol min-1 nmol-1, and 11.3 ± 2.8 µM, respectively. Gas chromatography-mass spectrometry (GC-MS) analysis showed that carbon 27 of the cholesterol side-chain was hydroxylated, characterizing CYP125A13 as steroid C27-hydroxylase. The homology modeling and docking results also revealed the binding of cholesterol to the active site, facilitated by the hydrophobic amino acids and position of the C27-methyl group near heme. This orientation was favorable for the hydroxylation of the C27-methyl group, supporting the in vitro analysis. This was the first reported case of the hydroxylation of cholesterol at the C-27 position by Streptomyces P450. This study also established the catalytic function of CYP125A13 and provides a solid basis for further studies related to the catabolic potential of Streptomyces species.


Asunto(s)
Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/metabolismo , Streptomyces/enzimología , Streptomyces/metabolismo , Dominio Catalítico , Clonación Molecular , Sistema Enzimático del Citocromo P-450/metabolismo , Ferredoxinas/metabolismo , Hidroxilación , Cinética , Modelos Químicos , Simulación del Acoplamiento Molecular , NADH NADPH Oxidorreductasas , Oxidación-Reducción , Filogenia , Pseudomonas putida/metabolismo , Alineación de Secuencia , Esteroide Hidroxilasas/clasificación , Esteroide Hidroxilasas/genética , Esteroles/química , Streptomyces/genética , Especificidad por Sustrato
3.
Int J Mol Sci ; 21(9)2020 May 07.
Artículo en Inglés | MEDLINE | ID: mdl-32392803

RESUMEN

Oxysterols, important regulators of cholesterol homeostasis in the brain, are affected by neurodegenerative diseases. Early-onset Alzheimer's disease is associated with higher levels of circulating brain-derived 24S-hydroxycholesterol (24S-OHC). Conversion of cholesterol to 24S-OHC is mediated by cholesterol 24S-hydroxylase in the brain, which is the major pathway for oxysterol elimination, followed by oxidation through hepatic first-pass metabolism by CYP39A1. Abnormal CYP39A1 expression results in accumulation of 24S-OHC, influencing neurodegenerative disease-related deterioration; thus, it is important to understand the normal elimination of 24S-OHC and the system regulating CYP39A1, a selective hepatic metabolic enzyme of 24S-OHC. We examined the role of transcriptional regulation by retinoic acid receptor-related orphan receptor α (RORα), a nuclear receptor that responds to oxysterol ligands. In humans, the promoter and first intronic regions of CYP39A1 contain two putative RORα response elements (ROREs). RORα binding and responses of these ROREs were assessed using electrophoretic mobility shift, chromatin immunoprecipitation, and luciferase reporter assays. CYP39A1 was upregulated by RORα overexpression in HEK293 cells, while RORα knockdown by siRNA significantly downregulated CYP39A1 expression in human hepatoma cells. Additionally, CYP39A1 was induced by RORα agonist treatment, suggesting that CYP39A1 expression is activated by RORα nuclear receptors. This may provide a way to increase CYP39A1 activity using RORα agonists, and help halt 24S-OHC accumulation in neurodegenerative illnesses.


Asunto(s)
Encéfalo/metabolismo , Hidroxicolesteroles/metabolismo , Miembro 1 del Grupo F de la Subfamilia 1 de Receptores Nucleares/metabolismo , Esteroide Hidroxilasas/genética , Regulación de la Expresión Génica , Células HEK293 , Células Hep G2 , Humanos , Hidroxicolesteroles/sangre , Intrones , Miembro 1 del Grupo F de la Subfamilia 1 de Receptores Nucleares/genética , Elementos de Respuesta , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/metabolismo
4.
J Biol Chem ; 294(40): 14591-14602, 2019 10 04.
Artículo en Inglés | MEDLINE | ID: mdl-31375561

RESUMEN

Zika virus (ZIKV)3 is an enveloped, single-stranded, positive-sense RNA virus of the Flaviviridae family that has emerged as a public health threat because of its global transmission and link to microcephaly. Currently there is no vaccine for this virus. Conversion of cholesterol to 25-hydroxycholesterol by cholesterol 25-hydroxylase (CH25H) has been shown to have broad antiviral properties. However, the molecular basis of induction of CH25H in humans is not known. Elucidation of signaling and transcriptional events for induction of CH25H expression is critical for designing therapeutic antiviral agents. In this study, we show that CH25H is induced by ZIKV infection or Toll-like receptor stimulation. Interestingly, CH25H is induced by pro-inflammatory cytokines, including IL-1ß, tumor necrosis factor α, and IL-6, and this induction depends on the STAT1 transcription factor. Additionally, we observed that cAMP-dependent transcription factor (ATF3) weakly binds to the CH25H promoter, suggesting cooperation with STAT1. However, ZIKV-induced CH25H was independent of type I interferon. These findings provide important information for understanding how the Zika virus induces innate inflammatory responses and promotes the expression of anti-viral CH25H protein.


Asunto(s)
Factor de Transcripción Activador 3/genética , Factor de Transcripción STAT1/genética , Esteroide Hidroxilasas/genética , Infección por el Virus Zika/genética , Virus Zika/genética , Antivirales/química , Antivirales/metabolismo , Citocinas/genética , Proteínas de Unión al ADN/química , Proteínas de Unión al ADN/genética , Regulación Enzimológica de la Expresión Génica , Humanos , Inflamación/enzimología , Inflamación/genética , Inflamación/virología , Interferón Tipo I/genética , Interleucina-1beta/genética , Interleucina-6/genética , Macrófagos/virología , Esteroide Hidroxilasas/química , Receptores Toll-Like/genética , Factor de Necrosis Tumoral alfa/genética , Replicación Viral/genética , Virus Zika/patogenicidad , Infección por el Virus Zika/enzimología , Infección por el Virus Zika/virología
5.
Appl Environ Microbiol ; 85(18)2019 09 15.
Artículo en Inglés | MEDLINE | ID: mdl-31324634

RESUMEN

In this study, we identified two P450 enzymes (CYP5150AP3 and CYP5150AN1) from Thanatephorus cucumeris NBRC 6298 by combination of transcriptome sequencing and heterologous expression in Pichia pastoris The biotransformation of 11-deoxycortisol and testosterone by Pichia pastoris whole cells coexpressing the cyp5150ap3 and por genes demonstrated that the CYP5150AP3 enzyme possessed steroidal 7ß-hydroxylase activities toward these substrates, and the regioselectivity was dependent on the structures of steroidal compounds. CYP5150AN1 catalyzed the 2ß-hydroxylation of 11-deoxycortisol. It is interesting that they display different regioselectivity of hydroxylation from that of their isoenzyme, CYP5150AP2, which possesses 19- and 11ß-hydroxylase activities.IMPORTANCE The steroidal hydroxylases CYP5150AP3 and CYP5150AN1 together with the previously characterized CYP5150AP2 belong to the CYP5150A family of P450 enzymes with high amino acid sequence identity, but they showed completely different regioselectivities toward 11-deoxycortisol, suggesting the regioselectivity diversity of steroidal hydroxylases of CYP5150 family. They are also distinct from the known bacterial and fungal steroidal hydroxylases in substrate specificity and regioselectivity. Biocatalytic hydroxylation is one of the important transformations for the functionalization of steroid nucleus rings but remains a very challenging task in organic synthesis. These hydroxylases are useful additions to the toolbox of hydroxylase enzymes for the functionalization of steroids at various positions.


Asunto(s)
Sistema Enzimático del Citocromo P-450/química , Proteínas Fúngicas/química , Rhizoctonia/enzimología , Esteroide Hidroxilasas/química , Biotransformación , Sistema Enzimático del Citocromo P-450/metabolismo , Proteínas Fúngicas/metabolismo , Hidroxilación , Esteroide Hidroxilasas/metabolismo , Esteroides/metabolismo , Especificidad por Sustrato
6.
J Ind Microbiol Biotechnol ; 46(5): 635-647, 2019 May.
Artículo en Inglés | MEDLINE | ID: mdl-30790119

RESUMEN

Cholesterol oxidase, steroid C27 monooxygenase and 3-ketosteroid-Δ1-dehydrogenase are key enzymes involved in microbial catabolism of sterols. Here, three isoenzymes of steroid C27 monooxygenase were firstly characterized from Mycobacterium neoaurum as the key enzyme in sterol C27-hydroxylation. Among these three isoenzymes, steroid C27 monooxygenase 2 exhibits the strongest function in sterol catabolism. To improve androst-1,4-diene-3,17-dione production, cholesterol oxidase, steroid C27 monooxygenase 2 and 3-ketosteroid-Δ1-dehydrogenase were coexpressed to strengthen the metabolic flux to androst-1,4-diene-3,17-dione, and 3-ketosteroid 9α-hydroxylase, which catalyzes the androst-1,4-diene-3,17-dione catabolism, was disrupted to block the androst-1,4-diene-3,17-dione degradation pathway in M. neoaurum JC-12. Finally, the recombinant strain JC-12S2-choM-ksdd/ΔkshA produced 20.1 g/L androst-1,4-diene-3,17-dione, which is the highest reported production with sterols as substrate. Therefore, this work is hopes to pave the way for efficient androst-1,4-diene-3,17-dione production through metabolic engineering.


Asunto(s)
Androstadienos/química , Isoenzimas/metabolismo , Micobacterias no Tuberculosas/metabolismo , Fitosteroles/metabolismo , Esteroles/química , Hidrocarburo de Aril Hidroxilasas/química , Microbiología Industrial , Ingeniería Metabólica , Metabolismo , Oxigenasas de Función Mixta/metabolismo , Oxidorreductasas/química , Plásmidos/metabolismo , Polienos/metabolismo , Esteroide Hidroxilasas/química
7.
FEBS J ; 286(9): 1683-1699, 2019 05.
Artículo en Inglés | MEDLINE | ID: mdl-30552795

RESUMEN

Bacterial cytochrome P450 (CYP) enzymes are involved in the hydroxylation of various endogenous substrates while using a heme molecule as a cofactor. CYPs have gained biotechnological interest as useful biocatalysts capable of altering chemical structures by adding a hydroxyl group in a regiospecific manner. Here, we identified, purified, and characterized two CYP154C4 proteins from Streptomyces sp. W2061 (StCYP154C4-1) and Streptomyces sp. ATCC 11861 (StCYP154C4-2). Activity assays showed that both StCYP154C4-1 and StCYP154C4-2 can produce 2'-hydroxylated testosterone, which differs from the activity of a previously described NfCYP154C5 from Nocardia farcinica in terms of its 16α-hydroxylation of testosterone. To better understand the molecular basis of the regioselectivity of these two CYP154C4 proteins, crystal structures of the ligand-unbound form of StCYP154C4-1 and the testosterone-bound form of StCYP154C4-2 were determined. Comparison with the previously determined NfCYP154C5 structure revealed differences in the substrate-binding residues, suggesting a likely explanation for the different patterns of testosterone hydroxylation, despite the high sequence similarities between the enzymes (54% identity). These findings provide valuable insights that will enable protein engineering for the development of artificial steroid-related CYPs exhibiting different regiospecificity.


Asunto(s)
Proteínas Bacterianas/química , Esteroide Hidroxilasas/química , Streptomyces/enzimología , Secuencia de Aminoácidos , Androstenodiona/metabolismo , Proteínas Bacterianas/metabolismo , Dominio Catalítico , Cromatografía Líquida de Alta Presión , Secuencia Conservada , Cristalografía por Rayos X , Ligandos , Modelos Moleculares , Resonancia Magnética Nuclear Biomolecular , Progesterona/metabolismo , Unión Proteica , Conformación Proteica , Proteínas Recombinantes/química , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Esteroide Hidroxilasas/metabolismo , Testosterona/metabolismo
8.
Chembiochem ; 19(17): 1827-1833, 2018 09 04.
Artículo en Inglés | MEDLINE | ID: mdl-29931794

RESUMEN

Steroids can be difficult to modify through traditional organic synthesis methods, but many enzymes regio- and stereoselectively process a wide variety of steroid substrates. We tested whether steroid-modifying enzymes could make novel steroids from non-native substrates. Numerous genes encoding steroid-modifying enzymes, including some bacterial enzymes, were expressed in mammalian cells by transient transfection and found to be active. We made three unusual steroids by stable expression, in HEK293 cells, of the 7α-hydroxylase CYP7B1, which was selected because of its high native product yield. These cells made 7α,17α-dihydroxypregnenolone and 7ß,17α-dihydroxypregnenolone from 17α-hydroxypregnenolone and produced 11α,16α-dihydroxyprogesterone from 16α-hydroxyprogesterone. The last two products were the result of CYP7B1-catalyzed hydroxylation at previously unobserved sites. A Rosetta docking model of CYP7B1 suggested that these substrates' D-ring hydroxy groups might prevent them from binding in the same way as the native substrates, bringing different carbon atoms close to the active ferryl oxygen atom. This new approach could potentially use other enzymes and substrates to produce many novel steroids for drug candidate testing.


Asunto(s)
Familia 7 del Citocromo P450/metabolismo , Esteroide Hidroxilasas/metabolismo , Esteroides/biosíntesis , Dominio Catalítico , Ingeniería Celular/métodos , Familia 7 del Citocromo P450/química , Células HEK293 , Humanos , Hidroxilación , Simulación del Acoplamiento Molecular , Unión Proteica , Esteroide Hidroxilasas/química , Esteroides/química , Esteroides/metabolismo , Especificidad por Sustrato
9.
J Microbiol Biotechnol ; 27(8): 1472-1482, 2017 Aug 28.
Artículo en Inglés | MEDLINE | ID: mdl-28633515

RESUMEN

Bacterial cytochrome P450 (CYP) steroid hydroxylases are effectively useful in the pharmaceutical industry for introducing hydroxyl groups to a wide range of steroids. We found a putative CYP steroid hydroxylase (BaCYP106A2) from the bacterium Bacillus sp. PAMC 23377 isolated from Kara Sea of the Arctic Ocean, showing 94% sequence similarity with BmCYP106A2 (Bacillus megaterium ATCC 13368). In this study, soluble BaCYP106A2 was overexpressed to evaluate its substrate-binding activity. The substrate affinity (Kd value) to 4-androstenedione was 387 ± 37 µM. Moreover, the crystal structure of BaCYP106A2 was determined at 2.7 Å resolution. Structural analysis suggested that the α8-α9 loop region of BaCYP106A2 is intrinsically mobile and might be important for initial ligand binding. The hydroxyl activity of BaCYP106A2 was identified using in vitro enzyme assays. Its activity was confirmed with two kinds of steroid substrates, 4-androstenedione and nandrolone, using chromatography and mass spectrometry methods. The main products were monohydroxylated compounds with high conversion yields. This is the second study on the structure of CYP106A steroid hydroxylases, and should contribute new insight into the interactions of bacterial CYP106A with steroid substrates, providing baseline data for studying the CYP106A steroid hydroxylase from the structural and enzymatic perspectives.


Asunto(s)
Bacillus/enzimología , Sistema Enzimático del Citocromo P-450/química , Esteroide Hidroxilasas/química , Androstenodiona/metabolismo , Regiones Árticas , Bacillus/aislamiento & purificación , Cristalografía por Rayos X , Sistema Enzimático del Citocromo P-450/metabolismo , Modelos Moleculares , Unión Proteica , Conformación Proteica , Agua de Mar , Esteroide Hidroxilasas/metabolismo , Especificidad por Sustrato
10.
J Mol Model ; 23(3): 96, 2017 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-28251412

RESUMEN

Numerous steroids are essential plant, animal, and human hormones. The medical and industrial applications of these hormones require the identification of new synthetic routes, including biotransformations. The metabolic fate of a steroid can be complicated; it may be transformed into a variety of substituted derivatives. This may be because a steroid molecule can adopt several possible orientations in the binding pocket of a receptor or an enzyme. The present study, based on docking and molecular dynamics, shows that it is indeed possible for a steroid molecule to bind to a receptor binding site in two or more orientations (normal, head-to-tail reversed, upside down). Three steroids were considered: progesterone, dehydroepiandrosterone, and 7-oxo-dehydroepiandrosterone. Two proteins were employed as hosts: the human mineralocorticoid receptor and a bacterial Baeyer-Villiger monooxygenase. When the steroids were in nonstandard orientations, the estimated binding strength was found to be only moderately diminished and the network of hydrogen bonds between the steroid and the host was preserved.


Asunto(s)
Deshidroepiandrosterona/análogos & derivados , Deshidroepiandrosterona/química , Progesterona/química , Esteroide Hidroxilasas/química , Sitios de Unión , Biotransformación/genética , Deshidroepiandrosterona/biosíntesis , Humanos , Enlace de Hidrógeno , Simulación del Acoplamiento Molecular , Simulación de Dinámica Molecular , Progesterona/biosíntesis , Unión Proteica , Receptores de Mineralocorticoides/química , Esteroide Hidroxilasas/genética , Esteroide Hidroxilasas/metabolismo , Especificidad por Sustrato
11.
SAR QSAR Environ Res ; 27(7): 559-72, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27353437

RESUMEN

In this study, recursive random forests were used to build classification models for mouse liver toxicity. The mouse liver toxicity endpoint (67 toxic and 166 non-toxic) was a composition of four in vivo chronic systemic and carcinogenic toxicity endpoints (non-proliferative, neoplastic, proliferative and gross pathology). A multiple under-sampling approach and a shifted classification threshold of 0.288 (non-toxic < 0.288 and toxic ≥ 0.288) were used to cope with the unbalanced data. Our study showed that recursive random forests are very efficient in variable selection and for the development of predictive in silico models. Generally, over 95% redundant descriptors could be reduced from modelling for all the chemical, biological and hybrid models in this study. The predictive performance of chemical models (CCR of 0.73) is comparable with hybrid model performance (CCR of 0.74). Descriptors related to the octanol-water partition coefficient are vital for model performance. The in vitro endpoint of CYP2A2 played a key role in the development and interpretation of hybrid models. Identifying high-throughput screening assays relevant to liver toxicity would be key for improving in silico models of liver toxicity.


Asunto(s)
Carcinógenos/toxicidad , Enfermedad Hepática Inducida por Sustancias y Drogas , Xenobióticos/toxicidad , Animales , Hidrocarburo de Aril Hidroxilasas/química , Hidrocarburo de Aril Hidroxilasas/metabolismo , Carcinógenos/química , Simulación por Computador , Hígado/patología , Aprendizaje Automático , Masculino , Ratones , Modelos Químicos , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/metabolismo , Xenobióticos/química
12.
Biomed Res Int ; 2016: 5727631, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-27340662

RESUMEN

The metabolism of cholesterol is critical in eukaryotes as a precursor for vitamins, steroid hormones, and bile acids. Some steroid compounds can be transformed into precursors of steroid medicine by some microorganisms. In this study, the biotransformation products of cholesterol and 16α,17α-epoxypregnenolone produced by Burkholderia cepacia SE-1 were investigated, and a correlative enzyme, hydroxylase, was also studied. The biotransformation products, 7ß-hydroxycholesterol, 7-oxocholesterol, and 20-droxyl-16α,17α-epoxypregn-1,4-dien-3-one, were purified by silica gel and Sephadex LH-20 column chromatography and identified by nuclear magnetic resonance and mass spectroscopy. The hydroxylase was isolated from the bacterium and the partial sequences of the hydroxylase, which belong to the catalases/peroxidase family, were analyzed using MS/MS analyses. The enzyme showed activity toward cholesterol and had a specific activity of 37.2 U/mg of protein at 30°C and pH 7.0.


Asunto(s)
17-alfa-Hidroxipregnenolona/metabolismo , Burkholderia cepacia/metabolismo , Colesterol/metabolismo , Esteroide Hidroxilasas/biosíntesis , Esteroide Hidroxilasas/química , Biotransformación/fisiología , Burkholderia cepacia/clasificación , Activación Enzimática , Especificidad de la Especie , Esteroide Hidroxilasas/aislamiento & purificación
13.
FEBS Lett ; 590(12): 1838-51, 2016 06.
Artículo en Inglés | MEDLINE | ID: mdl-27177597

RESUMEN

Myxobacterial CYP260B1 from Sorangium cellulosum was heterologously expressed in Escherichia coli and purified. The in vitro conversion of a small focused substrate library comprised of Δ4 C21-steroids and steroidal drugs using surrogate bovine redox partners shows that CYP260B1 is a novel steroid hydroxylase. CYP260B1 performs the regio- and stereoselective hydroxylation of the glucocorticoid cortodoxone (RSS) to produce 6ß-OH-RSS. The substrate-free crystal structure of CYP260B1 (PDB 5HIW) was resolved. Docking of the tested ligands into the crystal structure suggested that the C17 hydroxy moiety and the presence of either a keto or a hydroxy group at C11 determine the selectivity of hydroxylation.


Asunto(s)
Proteínas Bacterianas/química , Cortodoxona/química , Myxococcales/enzimología , Esteroide Hidroxilasas/química , Animales , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , Bovinos , Cortodoxona/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo , Hidroxilación , Simulación del Acoplamiento Molecular , Myxococcales/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Esteroide Hidroxilasas/genética , Esteroide Hidroxilasas/metabolismo , Relación Estructura-Actividad
14.
Biochim Biophys Acta ; 1860(7): 1395-403, 2016 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-27015760

RESUMEN

BACKGROUND: Structural studies on CYP2B enzymes identified some of the features that are related to their high plasticity. The aim of this work was to understand further the possible relationships between combinations of structural elements and functions by linking shift in substrate specificity with sequence element swaps between CYP2B6 and CYP2B11. METHODS: A series of 15 chimeras in which a small CYP2B6 sequence segment was swapped with its equivalent in CYP2B11 were constructed. All chimeras produced were thus mostly of CYP2B11 sequence. Time course studies were carried out with two typical CYP2B substrates, cyclophosphamide and 7-ethoxy-4-trifluoromethylcoumarin. Steady-state kinetic parameters were determined for all chimeras expressed in yeast. RESULTS: Most of the chimeras exhibit a high affinity for cyclophosphamide, as CYP2B11 does. A few exhibit an affinity similar to that of CYP2B6 without altered behavior toward the other substrate assayed. The swapped elements that control this specificity shift are discussed in terms of F'/G' cassette role and substrate access channels. CONCLUSIONS: Some sequence segments control precisely the shift in affinity for cyclophosphamide between CYP2B6, which has a typical low affinity, and CYP2B11 which has a typical high affinity. GENERAL SIGNIFICANCE: The result provides a new basis for determining the structural elements that control functions in complex enzymes.


Asunto(s)
Hidrocarburo de Aril Hidroxilasas/metabolismo , Citocromo P-450 CYP2B6/metabolismo , Esteroide Hidroxilasas/metabolismo , Animales , Hidrocarburo de Aril Hidroxilasas/química , Hidrocarburo de Aril Hidroxilasas/genética , Cumarinas/metabolismo , Ciclofosfamida/metabolismo , Citocromo P-450 CYP2B6/química , Citocromo P-450 CYP2B6/genética , Familia 2 del Citocromo P450 , Perros , Humanos , Cinética , Simulación del Acoplamiento Molecular , Unión Proteica , Conformación Proteica , Proteínas Recombinantes de Fusión/metabolismo , Saccharomyces cerevisiae/enzimología , Saccharomyces cerevisiae/genética , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/genética , Relación Estructura-Actividad , Especificidad por Sustrato
15.
Mol Phylogenet Evol ; 94(Pt B): 676-687, 2016 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-26432395

RESUMEN

Biosynthesis of steroid hormones in vertebrates involves three cytochrome P450 hydroxylases, CYP11A1, CYP17A1 and CYP19A1, which catalyze sequential steps in steroidogenesis. These enzymes are conserved in the vertebrates, but their origin and existence in other chordate subphyla (Tunicata and Cephalochordata) have not been clearly established. In this study, selected protein sequences of CYP11A1, CYP17A1 and CYP19A1 were compiled and analyzed using multiple sequence alignment and phylogenetic analysis. Our analyses show that cephalochordates have sequences orthologous to vertebrate CYP11A1, CYP17A1 or CYP19A1, and that echinoderms and hemichordates possess CYP11-like but not CYP19 genes. While the cephalochordate sequences have low identity with the vertebrate sequences, reflecting evolutionary distance, the data show apparent origin of CYP11 prior to the evolution of CYP19 and possibly CYP17, thus indicating a sequential origin of these functionally related steroidogenic CYPs. Co-occurrence of the three CYPs in early chordates suggests that the three genes may have coevolved thereafter, and that functional conservation should be reflected in functionally important residues in the proteins. CYP19A1 has the largest number of conserved residues while CYP11A1 sequences are less conserved. Structural analyses of human CYP11A1, CYP17A1 and CYP19A1 show that critical substrate binding site residues are highly conserved in each enzyme family. The results emphasize that the steroidogenic pathways producing glucocorticoids and reproductive steroids are several hundred million years old and that the catalytic structural elements of the enzymes have been conserved over the same period of time. Analysis of these elements may help to identify when precursor functions linked to these enzymes first arose.


Asunto(s)
Evolución Biológica , Cordados/genética , Hormonas Esteroides Gonadales/biosíntesis , Filogenia , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/genética , Secuencia de Aminoácidos , Animales , Sitios de Unión/genética , Humanos , Funciones de Verosimilitud
16.
Environ Sci Technol ; 49(24): 14588-96, 2015 Dec 15.
Artículo en Inglés | MEDLINE | ID: mdl-26579933

RESUMEN

The aim of this study was to understand the cytochrome P450 (CYP)-dependent metabolic pathway and potency of polychlorinated biphenyls (PCBs) in the Baikal seal (Pusa sibirica). In vitro metabolism of 62 PCB congener mixtures was investigated by using liver microsomes of this species. A decreased ratio of over 20% was observed for CB3, CB4, CB8, CB15, CB19, CB22, CB37, CB54, CB77, and CB105, suggesting the preferential metabolism of low-chlorinated PCBs by CYPs. The highly activated metabolic pathways in Baikal seals that were predicted from the decreased PCBs and detected hydroxylated PCBs (OH-PCBs) were CB22 to 4'OH-CB20 and CB77 to 4'OH-CB79. The total amount of OH-PCBs detected as identified and unidentified congeners accounted for only a 3.8 ± 1.7 mol % of loaded PCBs, indicating many unknown PCB metabolic pathways. To explore factors involved in CYP-dependent PCB metabolism, we examined the relationships among the structural and physicochemical properties of PCBs, the in silico PCB-CYP docking parameters, and the in vitro PCB decreased ratios by principal component analysis. Statistical analysis showed that the decreased PCB ratio was at least partly accounted for by the substituted chlorine number of PCBs and the distance from the Cl-unsubstituted carbon of docked PCBs to the heme Fe in CYP2A and 2B.


Asunto(s)
Sistema Enzimático del Citocromo P-450/metabolismo , Hígado/metabolismo , Bifenilos Policlorados/farmacocinética , Phocidae/metabolismo , Animales , Hidrocarburo de Aril Hidroxilasas/química , Hidrocarburo de Aril Hidroxilasas/genética , Hidrocarburo de Aril Hidroxilasas/metabolismo , Simulación por Computador , Sistema Enzimático del Citocromo P-450/química , Sistema Enzimático del Citocromo P-450/deficiencia , Hidroxilación , Inactivación Metabólica , Hígado/efectos de los fármacos , Microsomas Hepáticos/efectos de los fármacos , Microsomas Hepáticos/metabolismo , Simulación del Acoplamiento Molecular , Bifenilos Policlorados/metabolismo , Análisis de Componente Principal , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/genética , Esteroide Hidroxilasas/metabolismo , Contaminantes Químicos del Agua/metabolismo , Contaminantes Químicos del Agua/farmacocinética
17.
Food Chem Toxicol ; 83: 201-9, 2015 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-26115596

RESUMEN

Ginkgo biloba extract (GBE) is commonly used as a herbal supplement. The National Toxicology Program (NTP) study of GBE reported clear evidence of hepatocarcinogenicity in mice. To clarify the mode of action (MOA) for hepatocarcinogenesis by GBE, we investigated the involvement of the constitutive androstane receptor (CAR) in hepatocarcinogenesis induced by GBE using CAR-knockout (CARKO) and wild type (WT) mice. We used the same lot of GBE that was used for the NTP study. In 1-week GBE dietary treatment, hepatocellular DNA replication was increased in WT mice but not in CARKO mice. In 4- or 13-week treatment, greater hepatic Cyp2b10 induction and hepatocellular hypertrophy were observed in WT mice, whereas these effects of GBE were much smaller in CARKO mice. In a two-stage hepatocarcinogenesis model initiated by diethylnitrosamine, 27-week treatment with GBE resulted in an increase of eosinophilic altered foci and adenomas in WT mice. By contrast, foci and adenomas were clearly less evident in CARKO mice. These results indicate that GBE-induced hepatocarcinogenesis is mainly CAR-mediated. Since CAR-mediated MOA for hepatocarcinogenesis in rodents is considered to be qualitatively implausible for humans, our findings would be helpful to evaluate the carcinogenic characterization of GBE to humans.


Asunto(s)
Cocarcinogénesis/metabolismo , Suplementos Dietéticos/efectos adversos , Ginkgo biloba/química , Hepatomegalia/etiología , Neoplasias Hepáticas/etiología , Extractos Vegetales/efectos adversos , Receptores Citoplasmáticos y Nucleares/agonistas , Adenoma de Células Hepáticas/inducido químicamente , Adenoma de Células Hepáticas/etiología , Adenoma de Células Hepáticas/metabolismo , Adenoma de Células Hepáticas/patología , Animales , Hidrocarburo de Aril Hidroxilasas/química , Hidrocarburo de Aril Hidroxilasas/genética , Hidrocarburo de Aril Hidroxilasas/metabolismo , Carcinógenos/química , Carcinógenos/toxicidad , Cocarcinogénesis/patología , Receptor de Androstano Constitutivo , Inductores de las Enzimas del Citocromo P-450/efectos adversos , Familia 2 del Citocromo P450 , Replicación del ADN , Dietilnitrosamina/agonistas , Dietilnitrosamina/toxicidad , Hepatomegalia/metabolismo , Hepatomegalia/patología , Japón , Hígado/efectos de los fármacos , Hígado/metabolismo , Hígado/patología , Neoplasias Hepáticas/inducido químicamente , Neoplasias Hepáticas/metabolismo , Neoplasias Hepáticas/patología , Masculino , Ratones Endogámicos C3H , Ratones Noqueados , Receptores Citoplasmáticos y Nucleares/genética , Receptores Citoplasmáticos y Nucleares/metabolismo , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/genética , Esteroide Hidroxilasas/metabolismo , Pruebas de Toxicidad Subcrónica
18.
PLoS One ; 10(3): e0118476, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25734273

RESUMEN

The onset of floral development is a pivotal switch in the life of soybean. Brassinosteroids (BRs), a group of steroidal phytohormones with essential roles in plant growth and development, are associated with flowering induction. Genes involved in BR biosynthesis have been studied to a great extent in Arabidopsis, but the study of these genes has been limited in soybean. In this study, four CPD homologs (GmCPDs) catalyzing BR synthesis were isolated from soybean. Transcripts were mainly confined to cotyledons and leaves and were down-regulated in response to exogenous BR. Bioinformatic analysis showed strong sequence and structure similarity between GmCPDs and AtCPD as well as CPDs of other species. Overexpression of GmCPDs in an Arabidopsis BR-deficient mutant rescued the phenotype by restoring the biosynthesis pathway, revealing the functional roles of each GmCPDs in. Except for the rescue of root development, leaf expansion and plant type architecture, GmCPDs in expression also complemented the late flowering phenotype of Arabidopsis mutants deficient in CPD. Further evidence in soybean plants is that the expression levels of GmCPDs in are under photoperiod control in Zigongdongdou, a photoperiod-sensitive variety, and show a sudden peak upon floral meristem initiation. Together with increased GmCPDs in expression in the leaves and cotyledons of photoperiod-insensitive early-maturity soybean, it is clear that GmCPDs in contribute to flowering development and are essential in the early stages of flowering regulation.


Asunto(s)
Flores/metabolismo , Glycine max/metabolismo , Proteínas de Plantas/metabolismo , Esteroide Hidroxilasas/metabolismo , Secuencia de Aminoácidos , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Brasinoesteroides/biosíntesis , Brasinoesteroides/farmacología , Clonación Molecular , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Datos de Secuencia Molecular , Mutación , Fotoperiodo , Filogenia , Hojas de la Planta/efectos de los fármacos , Hojas de la Planta/metabolismo , Proteínas de Plantas/clasificación , Proteínas de Plantas/genética , Raíces de Plantas/efectos de los fármacos , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Plantas Modificadas Genéticamente/crecimiento & desarrollo , Plantas Modificadas Genéticamente/metabolismo , Alineación de Secuencia , Glycine max/efectos de los fármacos , Glycine max/genética , Glycine max/crecimiento & desarrollo , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/genética
19.
J Lipid Res ; 55(9): 1933-43, 2014 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-25017465

RESUMEN

Cytochrome P450 (P450 or CYP) 46A1 is expressed in brain and has been characterized by its ability to oxidize cholesterol to 24S-hydroxycholesterol. In addition, the same enzyme is known to further oxidize 24S-hydroxycholesterol to the 24,25- and 24,27-dihydroxy products, as well as to catalyze side-chain oxidations of 7α-hydroxycholesterol and cholestanol. As precursors in the biosynthesis of cholesterol, 7-dehydrocholesterol has not been found to be a substrate of P450 46A1 and desmosterol has not been previously tested. However, 24-hydroxy-7-dehydrocholesterol was recently identified in brain tissues, which prompted us to reexamine this enzyme and its potential substrates. Here we report that P450 46A1 oxidizes 7-dehydrocholesterol to 24-hydroxy-7-dehydrocholesterol and 25-hydroxy-7-dehydrocholesterol, as confirmed by LC-MS and GC-MS. Overall, the catalytic rates of formation increased in the order of 24-hydroxy-7-dehydrocholesterol < 24-hydroxycholesterol < 25-hydroxy-7-dehydrocholesterol from their respective precursors, with a ratio of 1:2.5:5. In the case of desmosterol, epoxidation to 24S,25-epoxycholesterol and 27-hydroxylation was observed, at roughly equal rates. The formation of these oxysterols in the brain may be of relevance in Smith-Lemli-Opitz syndrome, desmosterolosis, and other relevant diseases, as well as in signal transduction by lipids.


Asunto(s)
Deshidrocolesteroles/química , Desmosterol/química , Esteroide Hidroxilasas/química , Colesterol 24-Hidroxilasa , Humanos , Cinética , Oxidación-Reducción , Unión Proteica
20.
Anal Chem ; 86(8): 3688-92, 2014 Apr 15.
Artículo en Inglés | MEDLINE | ID: mdl-24654690

RESUMEN

P450 3A4 (CYP3A4) is one of the most important isoforms in the human cytochrome P450 superfamily. It was used as an example in this proof-of-concept study in order to demonstrate an activity-based labeling and then click chemistry (CC) mediated element-tagging strategy for simultaneously specific quantification and activity measurement of an enzyme using species-unspecific isotope dilution inductively coupled plasma mass spectrometry (SUID ICPMS). A dual functional hexynylated 17α-ethynylestradiol activity-based probe was synthesized for specifically labeling CYP3A4 and then CC-mediated Eu-tagging with an azido-DOTA-Eu complex for CYP3A4 quantification and activity measurement in human liver microsome and serum samples using (153)Eu SUID ICPMS. The LOD (3σ) of CYP3A4 reached 20.3 fmol when monitoring (151/153)Eu ICPMS signals, in addition to the merits of specificity and simultaneous activity measurement achieved. We believe that this activity-based CC-mediated element-tagging strategy will liberate more potential advantages of ICPMS in bioanalysis.


Asunto(s)
Química Clic/métodos , Citocromo P-450 CYP3A/química , Europio/química , Citocromo P-450 CYP3A/metabolismo , Estradiol/química , Humanos , Isótopos , Técnica de Dilución de Radioisótopos , Radioisótopos , Esteroide Hidroxilasas/química , Esteroide Hidroxilasas/metabolismo
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