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1.
New Phytol ; 232(4): 1603-1617, 2021 11.
Artículo en Inglés | MEDLINE | ID: mdl-34392544

RESUMEN

The coupling between mitochondrial respiration and photosynthesis plays an important role in the energetic physiology of green plants and some secondary-red photosynthetic eukaryotes (diatoms), allowing an efficient CO2 assimilation and optimal growth. Using the flagellate Euglena gracilis, we first tested if photosynthesis-respiration coupling occurs in this species harbouring secondary green plastids (i.e. originated from an endosymbiosis between a green alga and a phagotrophic euglenozoan). Second, we tested how the trophic state (mixotrophy and photoautotrophy) of the cell alters the mechanisms involved in the photosynthesis-respiration coupling. Energetic coupling between photosynthesis and respiration was determined by testing the effect of respiratory inhibitors on photosynthesis, and measuring the simultaneous variation of photosynthesis and respiration rates as a function of temperature (i.e. thermal response curves). The mechanism involved in the photosynthesis-respiration coupling was assessed by combining proteomics, biophysical and cytological analyses. Our work shows that there is photosynthesis-respiration coupling and membrane contacts between mitochondria and chloroplasts in E. gracilis. However, whereas in mixotrophy adjustment of the chloroplast ATP/NADPH ratio drives the interaction, in photoautotrophy the coupling is conditioned by CO2 limitation and photorespiration. This indicates that maintenance of photosynthesis-respiration coupling, through plastic metabolic responses, is key to E. gracilis functioning under changing environmental conditions.


Asunto(s)
Euglena gracilis , Fotosíntesis , Dióxido de Carbono , Cloroplastos , Euglena gracilis/fisiología , Plastidios
2.
Elife ; 102021 04 26.
Artículo en Inglés | MEDLINE | ID: mdl-33899738

RESUMEN

New mathematical model reveals how the flagella of some single-celled algae generate a lasso-like beat pattern that propels the cell through water.


Asunto(s)
Euglena gracilis/fisiología , Flagelos/fisiología
3.
Phys Rev Lett ; 126(5): 058001, 2021 Feb 05.
Artículo en Inglés | MEDLINE | ID: mdl-33605769

RESUMEN

We investigate how light polarization affects the motion of photoresponsive algae, Euglena gracilis. In a uniformly polarized field, cells swim approximately perpendicular to the polarization direction and form a nematic state with zero mean velocity. When light polarization varies spatially, cell motion is modulated by local polarization. In such light fields, cells exhibit complex spatial distribution and motion patterns which are controlled by topological properties of the underlying fields; we further show that ordered cell swimming can generate directed transporting fluid flow. Experimental results are quantitatively reproduced by an active Brownian particle model in which particle motion direction is nematically coupled to local light polarization.


Asunto(s)
Euglena gracilis/fisiología , Modelos Biológicos , Luz , Movimiento
4.
Sci Rep ; 11(1): 1074, 2021 01 13.
Artículo en Inglés | MEDLINE | ID: mdl-33441865

RESUMEN

The alga Euglena gracilis (E. gracilis) has recently gained attention as a health food, but its effects on human gut microbiota remain unknown. This study aimed to determine the effect of E. gracilis on gut microbiota and defecation due to modulation of microbiota composition in vitro and in vivo. The in vitro model simulating human colonic microbiota revealed that E. gracilis addition stimulated the growth of commensal Faecalibacterium. Further, E. gracilis addition enhanced butyrate production by Faecalibacterium prausnitzii. Paramylon, an insoluble dietary fibre that accumulates in E. gracilis and is the main component of E. gracilis, did not stimulate Faecalibacterium growth in vitro. Daily ingestion of 2 g of E. gracilis for 30 days increased bowel movement frequency as well as stool volume in 28 human participants. Collectively, these findings indicate that E. gracilis components other than paramylon, stimulate the growth of Faecalibacterium to improve digestive health as well as promote defecation by increasing butyrate production.


Asunto(s)
Defecación , Euglena gracilis/fisiología , Faecalibacterium/fisiología , Adulto , Butiratos/metabolismo , Defecación/fisiología , Faecalibacterium prausnitzii/fisiología , Microbioma Gastrointestinal/fisiología , Humanos , Persona de Mediana Edad , Reacción en Cadena en Tiempo Real de la Polimerasa
5.
Aquat Toxicol ; 228: 105650, 2020 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-33035767

RESUMEN

Micro(nano)plastics (MPs/NPs) are already present as contaminants in the natural environment globally and have been shown to be difficult to degrade, resulting in the potential for ecological damage and public health concerns. However, the adverse effects of exposure to MPs/NPs by aquatic organisms, especially freshwater microalgae, remains unclear. In the present study, the growth, physiology and transcriptome of the freshwater microalgae Euglena gracilis were comprehensively analyzed following exposure to 1 mg/L of polystyrene (PS) microbeads (5 µm PS-MPs and 100 nm PS-NPs), 0.5 mg/L cadmium (Cd), or a mixture of PS microbeads and Cd for 96 h. Results showed that the toxicity of PS-MPs to microalgae was greater than PS-NPs, inducing increased growth inhibition, oxidative damage and decreased photosynthesis pigment concentrations. PS-MPs alone or in combination with Cd caused cavitation within microalgal cells, as well as increasing the number and volume of vacuoles. The combined exposure toxicity test showed that a combination of Cd + PS-NPs was more toxic than Cd + PS-MPs, which may be explained by the transcriptomic analysis results. Differentially expressed genes (DEGs) in the Cd + PS-NPs group were mainly enriched in metabolism-related pathways, suggesting that algal metabolism was hindered, resulting in aggravation of toxicity. The reduced toxicity induced by Cd + PS-MPs may indicate a response to resist external stress processes. In addition, no adsorption of 0.5 mg/L Cd to 1 mg/L PS microbeads was observed, suggesting that adsorption of MPs/NPs and Cd was not the key factor determining the combined toxicity effects in this study.


Asunto(s)
Cadmio/toxicidad , Exposición a Riesgos Ambientales , Euglena gracilis/genética , Euglena gracilis/fisiología , Microalgas/genética , Microesferas , Poliestirenos/toxicidad , Transcripción Genética/efectos de los fármacos , Organismos Acuáticos/efectos de los fármacos , Organismos Acuáticos/genética , Organismos Acuáticos/crecimiento & desarrollo , Euglena gracilis/efectos de los fármacos , Euglena gracilis/ultraestructura , Perfilación de la Expresión Génica , Ontología de Genes , Microalgas/efectos de los fármacos , Microalgas/fisiología , Microalgas/ultraestructura , Estrés Oxidativo/efectos de los fármacos , Fotosíntesis/efectos de los fármacos , Pigmentos Biológicos/metabolismo , Contaminantes Químicos del Agua/toxicidad
6.
Plant Sci ; 298: 110564, 2020 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-32771165

RESUMEN

Euglena gracilis exhibits photomovements in response to various light stimuli, such as phototactic and photophobic responses. Our recent study revealed that carotenoids in the eyespot apparatus are required for triggering phototaxis in this alga. However, the role of chloroplasts in eyespot formation is not understood. Here, we isolated carotenoid-less (cl) strains of E. gracilis from cells silenced gene expression of phytoene synthase (EgcrtB). Unlike WT, the culture colors of cl1, cl3, and the non-photosynthetic mutant SM-ZK were orange, while that of cl4 was white. Electron microscope observations showed that SM-ZK, cl1, and cl3 had no developed chloroplast and formed a normal eyespot apparatus, similar to that of WT, but this was not the case for cl4. Carotenoids detected in WT were diadinoxanthin, neoxanthin, and ß-carotene. However, the most abundant species of SM-ZK, cl1, and cl3 was zeaxanthin, and there was no diadinoxanthin or neoxanthin. Photomovement analysis showed that SM-ZK, cl1, and cl3 exhibited negative phototactic and photophobic responses, similar to those of WT, whereas cl4 lacked negative phototaxis. Taken together, the formation of the eyespot apparatus required for phototaxis is independent of chloroplast development in E. gracilis, suggesting that this property is different from other photosynthetic flagellates.


Asunto(s)
Carotenoides/metabolismo , Cloroplastos/metabolismo , Euglena gracilis/fisiología , Fototaxis
7.
Plant J ; 101(5): 1091-1102, 2020 03.
Artículo en Inglés | MEDLINE | ID: mdl-31630463

RESUMEN

Carotenoids are the most universal and most widespread pigments in nature. They have played pivotal roles in the evolution of photosensing mechanisms in microbes and of vision in animals. Several groups of phytoflagellates developed a photoreceptive organelle called the eyespot apparatus (EA) consisting of two separable components: the eyespot, a cluster of carotenoid-rich globules that acts as a reflector device, and actual photoreceptors for photobehaviors. Unlike other algal eyespots, the eyespot of Euglenophyta lacks reflective properties and is generally considered to act as a shading device for the photoreceptor (paraflagellar body, PFB) for major photomovements. However, the function of the eyespot of Euglenophyta has not yet been fully proven. Here, we report that the blocking carotenoid biosynthesis in Euglena gracilis by suppressing the phytoene synthase gene (crtB) caused a defect in eyespot function resulting in a loss of phototaxis. Raman spectroscopy and transmission electron microscopy suggested that EgcrtB-suppressed cells formed eyespot globules but had a defect in the accumulation of carotenoids in those packets. Motion analysis revealed the loss of phototaxis in EgcrtB-suppressed cells: a defect in the initiation of turning movements immediately after a change in light direction, rather than a defect in the termination of cell turning at the appropriate position due to a loss of the shading effect on the PFB. This study revealed that carotenoids are essential for light perception by the EA for the initiation of phototactic movement by E. gracilis, suggesting one possible photosensory role of carotenoids in the EA for the phototaxis.


Asunto(s)
Carotenoides/metabolismo , Euglena gracilis/fisiología , Fototaxis/efectos de la radiación , Euglena gracilis/efectos de la radiación , Euglena gracilis/ultraestructura , Luz , Microscopía Electrónica de Transmisión , Orgánulos/metabolismo , Orgánulos/ultraestructura
8.
Nutrients ; 11(5)2019 May 22.
Artículo en Inglés | MEDLINE | ID: mdl-31121913

RESUMEN

Euglena gracilis EOD-1, a microalgal strain known for high yields of the ß-1, 3-glucan paramylon, is suggested to function as a dietary fiber and enhance immunity. Here, we aimed to investigate the effects of E. gracilis EOD-1 biomass (EOD1BM) ingestion on immunoglobulin A (IgA) antibody titers in saliva, its reactivity, and the health-related quality of life (QOL) in humans. Reacting human immunoglobulin preparations and saliva with paramylon granules revealed the presence of anti-paramylon antibodies in the blood and saliva. We conducted a placebo-controlled, double-blind, crossover study involving 13 healthy subjects who ingested the placebo or EOD1BM for 4 weeks. Saliva was collected from each subject before and after ingestion, and IgA titers and E. gracilis EOD-1 paramylon (EOD1PM) reactivity were compared. In the EOD1BM Ingestion group, the anti-EOD1PM IgA content and titer increased after EOD1BM ingestion. No such change was observed in the Placebo group. Furthermore, the health-related QOL, especially mental health, increased in the EOD1BM Ingestion group. Thus, EOD1BM ingestion led to the production of paramylon (PM)-specific IgA antibody and increased salivary IgA antibody titers. We demonstrate that EOD1BM ingestion enhanced the immunity in the mucosal surface, evoked an antigen-specific response, and increased the health-related QOL, thereby contributing to health improvement.


Asunto(s)
Euglena gracilis/química , Estado de Salud , Inmunoglobulina A/análisis , Calidad de Vida , Saliva/inmunología , Adulto , Anciano , Estudios Cruzados , Fibras de la Dieta , Método Doble Ciego , Euglena gracilis/fisiología , Glucanos/inmunología , Humanos , Inmunidad , Masculino , Persona de Mediana Edad
9.
J Plant Res ; 132(3): 431-438, 2019 May.
Artículo en Inglés | MEDLINE | ID: mdl-30980216

RESUMEN

Euglena gracilis has an organelle resembling hematochrome, with an appearance similar to the eyespot and the absorption band spectrally overlapped with that of the carotenoid. To discriminate the hematochrome-like granules and eyespot, scan-free, non-invasive, absorbance spectral imaging A(x, y, λ) microscopy of single live cells, where A(x, y, λ) means absorbance at a position (x, y) on a two-dimensional image at a specific wavelength λ was applied. This technique was demonstrated to be a powerful tool for basic research on intracellular structural analysis. By this method, characteristic absorption spectra specific to the hematochrome-like granule or eyespot were identified among a variety of spectra observed depending on the location inside the organelles. The hematochrome-like granule was dark orange and deep green in its outline and had a characteristic absorption peak at 620 nm as well as at 676 to 698 nm, suggesting that its origin is a component of chloroplast including chlorophyll a. Furthermore, the representative spectra of these organelles were derived by principal component analysis of the absorbance and its position in absorbance image, indicating that they can be distinguished from each other and other regions. It was also confirmed that even in areas where these organelles and chloroplasts overlap, one can distinguish them from each other. The present research clarified the absorption spectra of the eyespot with 1 × 1 µm spatial resolution and those unpublished of hematochrome-like granules of E. gracilis, and indicated that one can statistically distinguish these organelles by this method.


Asunto(s)
Euglena gracilis/metabolismo , Orgánulos/metabolismo , Animales , Euglena gracilis/fisiología , Microscopía Intravital , Microespectrofotometría , Orgánulos/fisiología , Células Fotorreceptoras/metabolismo , Células Fotorreceptoras/fisiología
10.
Sci Rep ; 9(1): 853, 2019 01 29.
Artículo en Inglés | MEDLINE | ID: mdl-30696857

RESUMEN

Euglena gracilis is a microalga, which has been used as a model organism for decades. Recent technological advances have enabled mass cultivation of this species for industrial applications such as feedstock in nutritional foods and cosmetics. E. gracilis degrades its storage polysaccharide (paramylon) under hypoxic conditions for energy acquisition by an oxygen-independent process and accumulates high amount of wax-ester as a by-product. Using this sequence of reactions referred to as wax-ester fermentation, E. gracilis is studied for its application in biofuel production. Although the wax-ester production pathway is well characterized, little is known regarding the biochemical reactions underlying the main metabolic route, especially, the existence of an unknown sulfur-compound metabolism implied by the nasty odor generation accompanying the wax-ester fermentation. In this study, we show sulfur-metabolomics of E. gracilis in aerobic and hypoxic conditions, to reveal the biochemical reactions that occur during wax-ester synthesis. Our results helped us in identifying hydrogen sulfide (H2S) as the nasty odor-producing component in wax-ester fermentation. In addition, the results indicate that glutathione and protein degrades during hypoxia, whereas cysteine, methionine, and their metabolites increase in the cells. This indicates that this shift of abundance in sulfur compounds is the cause of H2S synthesis.


Asunto(s)
Euglena gracilis/fisiología , Hipoxia/metabolismo , Compuestos de Azufre/aislamiento & purificación , Anaerobiosis , Biocombustibles , Ésteres/metabolismo , Fermentación , Glucanos/metabolismo , Sulfuro de Hidrógeno , Metabolómica , Transducción de Señal , Compuestos de Azufre/metabolismo , Ceras/metabolismo
11.
Plant Cell Physiol ; 60(2): 274-284, 2019 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-30346581

RESUMEN

Carotenoids participate in photosynthesis and photoprotection in oxygenic phototrophs. Euglena gracilis, a eukaryotic phytoflagellate, synthesizes several carotenoids: ß-carotene, neoxanthin, diadinoxanthin and diatoxanthin. Temperature is one of the most striking external stimuli altering carotenoid production. In the present study, to elucidate the regulation of carotenoid synthesis of E. gracilis in response to environmental stimuli, we functionally identified phytoene desaturase genes (crtP1 and crtP2) and the ζ-carotene desaturase gene (crtQ) of this alga and analyzed expression of those genes and the composition of major carotenoids in cells grown under cold (20�C) and high-intensity light (HL; 240 �mol photon m-2 s-1) conditions. 20�C-HL treatment increased the transcriptional level of the phytoene synthase gene (crtB), and crtP1 and crtP2, whose products catalyze the early steps of carotenoid biosynthesis in this alga. Cultivation at 20�C under illumination at 55 �mol photon m-2 s-1 (low-intensity light; LL) decreased the cell concentration, Chl and total major carotenoid content by 61, 75 and 50%, respectively, relative to control (25�C-LL) cells. When grown at 20�C-HL, the cells showed a greater decrease in cell concentration and photosynthetic pigment contents than those in 20�C-LL. ß-Carotene, neoxanthin and diadinoxanthin contents were decreased by more than half in 20�C-LL and 20�C-HL treatments. On the other hand, when subjected to 20�C-LL and 20�C-HL, the cells retained a diatoxanthin content comparable with control cells. Our findings suggested that diatoxanthin plays crucial roles in the acclimation to cold and intense light condition. To the best of our knowledge, this is the first report on a photosynthetic organism possessing dual crtP genes.


Asunto(s)
Carotenoides/metabolismo , Euglena gracilis/metabolismo , Regulación de la Expresión Génica de las Plantas , Oxidorreductasas/metabolismo , Proteínas Protozoarias/metabolismo , Frío , Euglena gracilis/enzimología , Euglena gracilis/genética , Euglena gracilis/fisiología , Genes de Plantas , Oxidorreductasas/genética , Filogenia , Proteínas Protozoarias/genética , Alineación de Secuencia , Estrés Fisiológico
12.
Nutrients ; 10(10)2018 Oct 03.
Artículo en Inglés | MEDLINE | ID: mdl-30282906

RESUMEN

We determined whether the benefits provided by the consumption of Euglena gracilis (Euglena), which is a unicellular photosynthesizing green alga and rich in insoluble dietary fiber paramylon, can be enhanced by the co-consumption of vegetables that are rich in soluble dietary fiber. Nine-week-old male C57BL/6J mice were divided into four groups: group 1 received normal diet, whereas groups 2, 3 and 4 received normal diet containing 0.3% paramylon, 1.0% Euglena, or 1.0% Euglena plus 0.3% vegetables (barley leaf, kale and ashitaba), respectively. Mice were fed ad libitum until 18 weeks of age. Euglena intake significantly decreased serum markers of inflammation and co-consumption of vegetables enhanced this reduction. Notably, we observed an increase in the fraction of beneficial bacteria producing short-chain fatty acids, a reduction in harmful bacteria that cause inflammation and an increase in short-chain fatty acid production. Visceral fat accumulation was also reduced. Subsequent analyses showed that co-consumption of Euglena with vegetables reduced adipocyte area, suppressed the expression of genes related to fatty acid synthesis and increased the expression of genes related to adipocyte growth and lipolysis. Therefore, co-consumption of Euglena with vegetables enhanced its anti-inflammatory effect and the inhibitory effect on visceral fat accumulation likely by modulating the composition of gut microbiota.


Asunto(s)
Antiinflamatorios , Dieta , Euglena gracilis/fisiología , Microbioma Gastrointestinal/fisiología , Grasa Intraabdominal/crecimiento & desarrollo , Verduras , Adipocitos/citología , Animales , Tamaño de la Célula , Ácidos Grasos Volátiles/análisis , Ácidos Grasos Volátiles/sangre , Heces/química , Glucanos/administración & dosificación , Interleucina-1beta/sangre , Interleucina-6/sangre , Grasa Intraabdominal/química , Metabolismo de los Lípidos/genética , Hígado/química , Masculino , Ratones , Ratones Endogámicos C57BL , ARN Mensajero/análisis , Sustancias Reactivas al Ácido Tiobarbitúrico/análisis , Ácido gamma-Aminobutírico/análisis , Ácido gamma-Aminobutírico/sangre
13.
J Hazard Mater ; 360: 82-88, 2018 10 15.
Artículo en Inglés | MEDLINE | ID: mdl-30098532

RESUMEN

The oxidative systems including enzymatic systems have been widely studied as an alternative for textile effluents treatment. However, studies have shown that some oxidative processes can produce degradation products with higher toxicity than the untreated dye. In this work, enzymatic dye decolorization was evaluated by horseradish peroxidase enzyme (HRP) and the toxicity of discoloration products was evaluate against Daphnia magna, Euglena gracilis algae, and Vibrio fischeri. Dye decolorization kinetics data were evaluated and the pseudo-second-order model showed the best-fitting to the experimental data. In addition, it was observed an increased acute and chronic toxicity associated with the decolorization efficiency. The Reactive Blue 19 and Reactive Black dye showed the highest toxicity against D. Magna (16 toxicity factor) and V. Fischeri (32 toxicity factor) after enzymatic decolorization. For the chronic toxicity against D. Magna, Reactive Red was the only dye with no fertility inhibition. In relation to toxicity tests with E. gracilis algae, it was not observed photosynthetic inhibition for all dyes. This study verified the viability of the enzyme horseradish peroxidase in the textile dyes decolorization and the importance to evaluate the decolorization products.


Asunto(s)
Colorantes/química , Peroxidasa de Rábano Silvestre/química , Contaminantes Químicos del Agua/química , Aliivibrio fischeri/efectos de los fármacos , Aliivibrio fischeri/metabolismo , Animales , Color , Colorantes/toxicidad , Daphnia/efectos de los fármacos , Daphnia/fisiología , Euglena gracilis/efectos de los fármacos , Euglena gracilis/fisiología , Femenino , Longevidad/efectos de los fármacos , Luminiscencia , Masculino , Fotosíntesis/efectos de los fármacos , Reproducción/efectos de los fármacos , Soluciones , Textiles , Contaminantes Químicos del Agua/toxicidad
14.
Sci Rep ; 8(1): 7605, 2018 05 15.
Artículo en Inglés | MEDLINE | ID: mdl-29765103

RESUMEN

Flagellated cells are of great evolutionary importance across animal and plant species. Unlike higher plants, flagellated cells are involved in reproduction of macro-algae as well as in early diverging land plants. Euglena gracilis is an emerging flagellated model organism. The current study reports that a specific calmodulin (CaM2) involved in gravitaxis of E. gracilis interacts with an evolutionary conserved flagellar protein, EgPCDUF4201. The subsequent molecular analysis showed clearly that EgPCDUF4201 is also involved in gravitaxis. We performed subcellular localization of CaM2 using immunoblotting and indirect immunofluorescence. By employing yeast two-hybrid screen, EgPCDUF4201 was identified as an interaction partner of CaM2. The C-terminus of EgPCDUF4201 is responsible for the interaction with CaM2. Silencing of N- and C-terminus of EgPCDUF4201 using RNAi resulted in an impaired gravitaxis. Moreover, indirect immunofluorescence assay showed that EgPCDUF4201 is a flagella associated protein. The current study specifically addressed some important questions regarding the signal transduction chain of gravitaxis in E. gracilis. Besides the fact that it improved the current understanding of gravity sensing mechanisms in E. gracilis, it also gave rise to several interesting research questions regarding the function of the domain of unknown function 4201 in flagellated cells.


Asunto(s)
Calmodulina/metabolismo , Euglena gracilis/fisiología , Flagelina/metabolismo , Flagelina/química , Sensación de Gravedad , Dominios Proteicos , Proteínas Protozoarias/metabolismo , ARN Interferente Pequeño/farmacología , Técnicas del Sistema de Dos Híbridos
15.
Proc Natl Acad Sci U S A ; 114(50): 13085-13090, 2017 12 12.
Artículo en Inglés | MEDLINE | ID: mdl-29180429

RESUMEN

The flagellar swimming of euglenids, which are propelled by a single anterior flagellum, is characterized by a generalized helical motion. The 3D nature of this swimming motion, which lacks some of the symmetries enjoyed by more common model systems, and the complex flagellar beating shapes that power it make its quantitative description challenging. In this work, we provide a quantitative, 3D, highly resolved reconstruction of the swimming trajectories and flagellar shapes of specimens of Euglena gracilis We achieved this task by using high-speed 2D image recordings taken with a conventional inverted microscope combined with a precise characterization of the helical motion of the cell body to lift the 2D data to 3D trajectories. The propulsion mechanism is discussed. Our results constitute a basis for future biophysical research on a relatively unexplored type of eukaryotic flagellar movement.


Asunto(s)
Euglena gracilis/fisiología , Flagelos/fisiología , Movimiento , Fenómenos Biomecánicos , Euglena gracilis/ultraestructura , Flagelos/ultraestructura , Movimiento (Física)
16.
Adv Exp Med Biol ; 979: 125-140, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28429320

RESUMEN

Euglena gracilis is a major component of the aquatic ecosystem and together with closely related species, is ubiquitous worldwide. Euglenoids are an important group of protists, possessing a secondarily acquired plastid and are relatives to the Kinetoplastidae, which themselves have global impact as disease agents. To understand the biology of E. gracilis, as well as to provide further insight into the evolution and origins of the Kinetoplastidae, we embarked on sequencing the nuclear genome; the plastid and mitochondrial genomes are already in the public domain. Earlier studies suggested an extensive nuclear DNA content, with likely a high degree of repetitive sequence, together with significant extrachromosomal elements. To produce a list of coding sequences we have combined transcriptome data from both published and new sources, as well as embarked on de novo sequencing using a combination of 454, Illumina paired end libraries and long PacBio reads. Preliminary analysis suggests a surprisingly large genome approaching 2 Gbp, with a highly fragmented architecture and extensive repeat composition. Over 80% of the RNAseq reads from E. gracilis maps to the assembled genome sequence, which is comparable with the well assembled genomes of T. brucei and T. cruzi. In order to achieve this level of assembly we employed multiple informatics pipelines, which are discussed here. Finally, as a preliminary view of the genome architecture, we discuss the tubulin and calmodulin genes, which highlight potential novel splicing mechanisms.


Asunto(s)
Núcleo Celular , ADN Protozoario , Euglena gracilis/fisiología , Genoma de Protozoos/fisiología , Mitocondrias , Plastidios , Núcleo Celular/genética , Núcleo Celular/metabolismo , ADN Protozoario/genética , ADN Protozoario/metabolismo , Mitocondrias/genética , Mitocondrias/metabolismo , Plastidios/genética , Plastidios/metabolismo
17.
Adv Exp Med Biol ; 979: 207-235, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28429324

RESUMEN

Motile microorganisms such as the green Euglena gracilis use a number of external stimuli to orient in their environment. They respond to light with photophobic responses, photokinesis and phototaxis, all of which can result in accumulations of the organisms in suitable habitats. The light responses operate synergistically with gravitaxis, aerotaxis and other responses. Originally the microscopically obvious stigma was thought to be the photoreceptor, but later the paraxonemal body (PAB, paraflagellar body) has been identified as the light responsive organelle, located in the trailing flagellum inside the reservoir. The stigma can aid in light direction perception by shading the PAB periodically when the cell rotates helically in lateral light, but stigmaless mutants can also orient with respect to the light direction, and negative phototaxis does not need the presence of the stigma. The PAB is composed of dichroically oriented chromoproteins which is reflected in a pronounced polarotaxis in polarized light. There was a long debate about the potential photoreceptor molecule in Euglena, including carotenoids, flavins and rhodopsins. This discussion was terminated by the unambiguous proof that the photoreceptor is a 400 kDa photoactivated adenylyl cyclase (PAC) which consists of two α- and two ß-subunits each. Each subunit possesses two BLUF (Blue Light receptor Using FAD) domains binding FAD, which harvest the light energy, and two adenylyl cyclases, which produce cAMP from ATP. The cAMP has been found to activate one of the five protein kinase s found in Euglena (PK.4). This enzyme in turn is thought to phosphorylate proteins inside the flagellum which result in a change in the flagellar beating pattern and thus a course correction of the cell. The involvements of PAC and protein kinase have been confirmed by RNA interference (RNAi). PAC is responsible for step-up photophobic responses as well as positive and negative phototaxis, but not for the step-down photophobic response, even though the action spectrum of this resembles those for the other two responses. Analysis of several colorless Euglena mutants and the closely related Euglena longa (formerly Astasia longa) confirms the results. Photokinesis shows a completely different action spectrum. Some other Euglena species, such as E. sanguinea and the gliding E. mutabilis, have been investigated, again showing totally different action spectra for phototaxis and photokinesis as well as step-up and step-down photophobic responses.


Asunto(s)
Euglena gracilis/fisiología , Fototaxis/fisiología , Flagelos/genética , Flagelos/metabolismo , Orgánulos/genética , Orgánulos/metabolismo , Proteínas Protozoarias/genética , Proteínas Protozoarias/metabolismo
18.
PLoS One ; 12(2): e0172813, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28234984

RESUMEN

The adaptation to a strong light is one of the essential characteristics of green algae, yet lacking relatively the information about the photophobic responses of Eukaryotic microalgae. We investigated the photophobic step-up responses of Euglena gracilis over a time course of several hours with alternated repetition of blue-light pulse illumination and spatially patterned blue-light illumination. Four distinctive photophobic motions in response to strong blue light were identified in a trace image analysis, namely on-site rotation, running and tumbling, continuous circular swimming, and unaffected straightforward swimming. The cells cultured in autotrophic conditions under weak light showed mainly the on-site rotation response at the beginning of blue-light illumination, but they acquired more blue-light tolerant responses of running and tumbling, circular swimming, or straightforward swimming. The efficiency of escaping from a blue-light illuminated area improved markedly with the development of these photophobic motions. Time constant of 3.0 h was deduced for the evolution of photophobic responses of E. gracilis. The nutrient-rich metabolic status of the cells resulting from photosynthesis during the experiments, i.e., the accumulation of photosynthesized nutrient products in balance between formation and consumption, was the main factor responsible for the development of photophobic responses. The reduction-oxidation status in and around E. gracilis cells did not affect their photophobic responses significantly, unlike the case of photophobic responses and phototaxis of Chlamydomonas reinhardtii cells. This study shows that the evolution of photophobic motion type of E. gracilis is dominated mainly by the nutrient metabolic status of the cells. The fact suggests that the nutrient-rich cells have a higher threshold for switching the flagellar motion from straightforward swimming to rotation under a strong light.


Asunto(s)
Euglena gracilis/fisiología , Luz , Fototaxis , Adaptación Fisiológica , Animales , Movimiento Celular , Chlamydomonas reinhardtii/fisiología , Alimentos , Procesamiento de Imagen Asistido por Computador , Microalgas/fisiología , Estrés Oxidativo , Estimulación Luminosa , Fotosíntesis , Rotación , Factores de Tiempo , Grabación en Video
19.
PLoS One ; 11(12): e0168114, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-28033336

RESUMEN

We have quantified the photomovement behavior of a suspension of Euglena gracilis representing a behavioral response to a light gradient. Despite recent measurements of phototaxis and photophobicity, the details of macroscopic behavior of cell photomovements under conditions of light intensity gradients, which are critical to understand recent experiments on spatially localized bioconvection patterns, have not been fully understood. In this paper, the flux of cell number density under a light intensity gradient was measured by the following two experiments. In the first experiment, a capillary containing the cell suspension was illuminated with different light intensities in two regions. In the steady state, the differences of the cell numbers in the two regions normalized by the total number were proportional to the light difference, where the light intensity difference ranged from 0.5-2.0 µmol m-2 s-1. The proportional coefficient was positive (i.e., the bright region contained many microorganisms) when the mean light intensity was weak (1.25 µmol m-2 s-1), whereas it was negative when the mean intensity was strong (13.75 µmol m-2 s-1). In the second experiment, a shallow rectangular container of the suspension was illuminated with stepwise light intensities. The cell number density distribution exhibited a single peak at the position where the light intensity was about Ic ≃ 3.8 µmol m-2 s-1. These results suggest that the suspension of E. gracilis responded to the light gradient and that the favorable light intensity was Ic.


Asunto(s)
Euglena gracilis/fisiología , Luz , Estimulación Luminosa , Fototaxis/fisiología , Recuento de Células , Fenómenos Físicos
20.
PLoS One ; 11(10): e0162602, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-27706189

RESUMEN

For centuries, observational microscopy has greatly facilitated biology education, but we still cannot easily and playfully interact with the microscopic world we see. We therefore developed the LudusScope, an accessible, interactive do-it-yourself smartphone microscopy platform that promotes exploratory stimulation and observation of microscopic organisms, in a design that combines the educational modalities of build, play, and inquire. The LudusScope's touchscreen and joystick allow the selection and stimulation of phototactic microorganisms such as Euglena gracilis with light. Organismal behavior is tracked and displayed in real time, enabling open and structured game play as well as scientific inquiry via quantitative experimentation. Furthermore, we used the Scratch programming language to incorporate biophysical modeling. This platform is designed as an accessible, low-cost educational kit for easy construction and expansion. User testing with both teachers and students demonstrates the educational potential of the LudusScope, and we anticipate additional synergy with the maker movement. Transforming observational microscopy into an interactive experience will make microbiology more tangible to society, and effectively support the interdisciplinary learning required by the Next Generation Science Standards.


Asunto(s)
Disciplinas de las Ciencias Biológicas/educación , Microscopía/métodos , Teléfono Inteligente , Euglena gracilis/química , Euglena gracilis/fisiología , Euglena gracilis/efectos de la radiación , Luz , Microscopía/instrumentación , Programas Informáticos
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