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1.
Gene ; 928: 148815, 2024 Nov 30.
Artículo en Inglés | MEDLINE | ID: mdl-39097208

RESUMEN

Rehmannia glutinosa produces many phenylethanoid glycoside (PhG) compounds, including salidroside, which not only possesses various biological activities but also is a core precursor of some medicinal PhGs, so it is very important to elucidate the species' salidroside biosynthesis pathway to enhance the production of salidroside and its derivations. Although some plant copper-containing amine oxidases (CuAOs), phenylacetaldehyde reductases (PARs) and UDP-glucose glucosyltransferases (UGTs) are thought to be vital catalytic enzymes involved in the downstream salidroside biosynthesis pathways, to date, none of these proteins or the associated genes in R. glutinosa have been characterized. To verify a postulated R. glutinosa salidroside biosynthetic pathway starting from tyrosine, this study identified and characterized a set of R. glutinosa genes encoding RgCuAO, RgPAR and RgUGT enzymes for salidroside biosynthesis. The functional activities of these proteins were tested in vitro by heterologous expression of these genes in Escherichia coli, confirming these catalytic abilities in these corresponding reaction steps of the biosynthetic pathway. Importantly, four enzyme-encoding genes (including the previously reported RgTyDC2 encoding tyrosine decarboxylase and the RgCuAO1, RgPAR1 and RgUGT2 genes) were cointegrated into Saccharomyces cerevisiae to reconstitute the R. glutinosa salidroside biosynthetic pathway, achieving an engineered strain that produced salidroside and validating these enzymes' catalytic functions. This study elucidates the complete R. glutinosa salidroside biosynthesis pathway from tyrosine metabolism in S. cerevisiae, establishing a basic platform for the efficient production of salidroside and its derivatives.


Asunto(s)
Vías Biosintéticas , Glucósidos , Fenoles , Rehmannia , Saccharomyces cerevisiae , Fenoles/metabolismo , Saccharomyces cerevisiae/genética , Saccharomyces cerevisiae/metabolismo , Glucósidos/biosíntesis , Glucósidos/metabolismo , Rehmannia/genética , Rehmannia/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Escherichia coli/genética , Escherichia coli/metabolismo
2.
Biotechnol J ; 19(8): e2400347, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-39167556

RESUMEN

Plant-derived ß-glucosidases hold promise for glycoside biosynthesis via reverse hydrolysis because of their excellent glucose tolerance and robust stability. However, their poor heterologous expression hinders the development of large-scale production and applications. In this study, we overexpressed apple seed ß-glucosidase (ASG II) in Komagataella phaffii and enhanced its production from 289 to 4322 U L-1 through expression cassette engineering and protein engineering. Upon scaling up to a 5-L high cell-density fermentation, the resultant mutant ASG IIV80A achieved a maximum protein concentration and activity in the secreted supernatant of 2.3 g L-1 and 41.4 kU L-1, respectively. The preparative biosynthesis of salidroside by ASG IIV80A exhibited a high space-time yield of 33.1 g L-1 d-1, which is so far the highest level by plant-derived ß-glucosidase. Our work addresses the long-standing challenge of the heterologous expression of plant-derived ß-glucosidase in microorganisms and presents new avenues for the efficient production of salidroside and other natural glycosides.


Asunto(s)
Glucósidos , Malus , Fenoles , Semillas , beta-Glucosidasa , Fenoles/metabolismo , beta-Glucosidasa/genética , beta-Glucosidasa/metabolismo , Glucósidos/biosíntesis , Glucósidos/metabolismo , Glucósidos/química , Semillas/genética , Semillas/metabolismo , Saccharomycetales/genética , Saccharomycetales/metabolismo , Saccharomycetales/enzimología , Fermentación , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Ingeniería de Proteínas/métodos
3.
Sheng Wu Gong Cheng Xue Bao ; 40(8): 2604-2625, 2024 Aug 25.
Artículo en Chino | MEDLINE | ID: mdl-39174472

RESUMEN

Tyrosol is a natural phenolic compound with antioxidant, anti-inflammatory and other biological activities, serving as an important precursor of high-value products such as hydroxytyrosol and salidroside. Therefore, the green and efficient biosynthesis of tyrosol and its derivatives has become a research hotspot in recent years. Building cell factories by metabolic engineering of microorganisms is a potential industrial production way, which has low costs and environmental friendliness. This paper introduces the biosynthesis pathway of tyrosol and presents the key regulated nodes in the de novo synthesis of tyrosol in Escherichia coli and Saccharomyces cerevisiae. In addition, this paper reviews the recent advances in metabolic engineering for the production of hydroxytyrosol and salidroside. This review can provide a reference for engineering the strains for the high-yield production of tyrosol and its derivatives.


Asunto(s)
Escherichia coli , Ingeniería Metabólica , Alcohol Feniletílico , Saccharomyces cerevisiae , Alcohol Feniletílico/análogos & derivados , Alcohol Feniletílico/metabolismo , Ingeniería Metabólica/métodos , Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/genética , Escherichia coli/metabolismo , Escherichia coli/genética , Fenoles/metabolismo , Glucósidos/biosíntesis , Glucósidos/metabolismo , Microbiología Industrial
4.
Genes Genomics ; 46(9): 1107-1122, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39126602

RESUMEN

BACKGROUND AND RESEARCH PURPOSE: Paeoniflorin and albiflorin are monoterpene glycosides that exhibit various medicinal properties in Paeonia species. This study explored the terpene biosynthesis pathway and analyzed the distribution of these compounds in different tissues of two Korean landraces of Paeonia lactiflora to gain insights into the biosynthesis of monoterpene glycosides in P. lactiflora and their potential applications. MATERIALS AND METHODS: Two Korean landraces, Hongcheon var. and Hwacheon var, of P. lactiflora were used for the analyses. Contents of the paeoniflorin and albiflorin were analyzed using HPLC. RNA was extracted, sequenced, and subjected to transcriptome analysis. Differential gene expression, KEGG, and GO analyses were performed. Paeoniflorin biosynthesis genes were isolated from the transcriptomes using the genes in Euphorbia maculata with the NBLAST program. Phylogenetic analysis of of 1-Deoxy-D-xylulose 5-phosphate synthase (DOXPS), geranyl pyrophosphate synthase (GPPS), and pinene synthase (PS) was carried out with ClustalW and MEGA v5.0. RESULTS AND DISCUSSION: Analysis of paeoniflorin and albiflorin content in different tissues of the two P. lactiflora landraces revealed significant variation. Transcriptome analysis yielded 36,602 unigenes, most of which were involved in metabolic processes. The DEG analysis revealed tissue-specific expression patterns with correlations between landraces. The isolation of biosynthetic genes identified 173 candidates. Phylogenetic analysis of the key enzymes in these pathways provides insights into their evolutionary relationships. The sequencing and analysis of DOXPS, GPPS, PS revealed distinct clades and subclades, highlighting their evolutionary divergence and functional conservation. Our findings highlight the roots as the primary sites of paeoniflorin and albiflorin accumulation in P. lactiflora, underscoring the importance of tissue-specific gene expression in their biosynthesis. CONCLUSION: this study advances our understanding of monoterpene glycoside production and distribution in Paeonia, thereby guiding further plant biochemistry investigations.


Asunto(s)
Glucósidos , Monoterpenos , Paeonia , Paeonia/genética , Paeonia/metabolismo , Glucósidos/metabolismo , Glucósidos/biosíntesis , Monoterpenos/metabolismo , Hidrocarburos Aromáticos con Puentes/metabolismo , Filogenia , Regulación de la Expresión Génica de las Plantas , Transcriptoma/genética , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Vías Biosintéticas/genética
5.
J Agric Food Chem ; 72(34): 19093-19106, 2024 Aug 28.
Artículo en Inglés | MEDLINE | ID: mdl-39161099

RESUMEN

Luteolin-7-O-glucoside(L7G), a glycosylation product of luteolin, is present in a variety of foods, vegetables, and medicinal herbs and is commonly used in dietary supplements due to its health benefits. Meanwhile, luteolin-7-O-glucoside is an indicator component for the quality control of honeysuckle in the pharmacopoeia. However, its low content in plants has hindered its use in animal pharmacological studies and clinical practice. In this study, a novel 7-O-glycosyltransferase CmGT from Cucurbita moschata was cloned, which could efficiently convert luteolin into luteolin-7-O-glucoside under optimal conditions (40 °C and pH 8.5). To further improve the catalytic efficiency of CmGT, a 3D structure of CmGT was constructed, and directed evolution was performed. The mutant CmGT-S16A-T80W was obtained by using alanine scanning and iterative saturation mutagenesis. This mutant exhibited a kcat/Km value of 772 s-1·M-1, which was 3.16-fold of the wild-type enzyme CmGT. Finally, by introducing a soluble tag and UDPG synthesis pathway, the strain BXC was able to convert 1.25 g/L of luteolin into 1.91 g/L of luteolin-7-O-glucoside under optimal conditions, achieving a molar conversion rate of 96% and a space-time yield of 27.08 mg/L/h. This study provides an efficient method for the biosynthesis of luteolin-7-O-glucoside, which holds broad application prospects in the food and pharmaceutical industry.


Asunto(s)
Biocatálisis , Cucurbita , Glucósidos , Glicosiltransferasas , Luteolina , Proteínas de Plantas , Glucósidos/metabolismo , Glucósidos/química , Glucósidos/biosíntesis , Luteolina/química , Luteolina/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Proteínas de Plantas/química , Glicosiltransferasas/genética , Glicosiltransferasas/metabolismo , Glicosiltransferasas/química , Cucurbita/genética , Cucurbita/enzimología , Cucurbita/química , Cucurbita/metabolismo , Clonación Molecular , Cinética , Evolución Molecular Dirigida
6.
Int J Biol Macromol ; 273(Pt 2): 133205, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38885871

RESUMEN

Although myricetin (3,3',4',5,5',7-hexahydroxyflavone, MYR) has a high antioxidant capacity and health functions, its use as a functional food material is limited owing to its low stability and water solubility. Amylosucrase (ASase) is capable of biosynthesizing flavonol α-glycoside using flavonols as acceptor molecules and sucrose as a donor molecule. Here, ASase from Deinococcus deserti (DdAS) efficiently biosynthesizes a novel MYR α-triglucoside (MYRαG3) using MYR as the acceptor molecule. Comparative homology analysis and computational simulation revealed that DdAS has a different active pocket for the transglycosylation reaction. DdAS produced MYRαG3 with a conversion efficiency of 67.4 % using 10 mM MYR and 50 mM sucrose as acceptor and donor molecules, respectively. The structure of MYRαG3 was identified as MYR 4'-O-4″,6″-tri-O-α-D-glucopyranoside using NMR and LC-MS. In silico analysis confirmed that DdAS has a distinct active pocket compared to other ASases. In addition, molecular docking simulations predicted the synthetic sequence of MYRαG3. Furthermore, MYRαG3 showed a similar DPPH radical scavenging activity of 49 %, comparable to MYR, but with significantly higher water solubility, which increased from 0.03 µg/mL to 511.5 mg/mL. In conclusion, this study demonstrated the efficient biosynthesis of a novel MYRαG3 using DdAS and highlighted the potential of MYRαG3 as a functional material.


Asunto(s)
Deinococcus , Flavonoides , Glucósidos , Glucosiltransferasas , Solubilidad , Deinococcus/enzimología , Glucosiltransferasas/química , Glucosiltransferasas/metabolismo , Flavonoides/química , Flavonoides/metabolismo , Flavonoides/biosíntesis , Glucósidos/química , Glucósidos/biosíntesis , Glucósidos/metabolismo , Antioxidantes/química , Antioxidantes/metabolismo , Simulación del Acoplamiento Molecular
7.
Plant J ; 119(2): 927-941, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38872484

RESUMEN

Acteoside is a bioactive phenylethanoid glycoside widely distributed throughout the plant kingdom. Because of its two catechol moieties, acteoside displays a variety of beneficial activities. The biosynthetic pathway of acteoside has been largely elucidated, but the assembly logic of two catechol moieties in acteoside remains unclear. Here, we identified a novel polyphenol oxidase OfPPO2 from Osmanthus fragrans, which could hydroxylate various monophenolic substrates, including tyrosine, tyrosol, tyramine, 4-hydroxyphenylacetaldehyde, salidroside, and osmanthuside A, leading to the formation of corresponding catechol-containing intermediates for acteoside biosynthesis. OfPPO2 could also convert osmanthuside B into acteoside, creating catechol moieties directly via post-modification of the acteoside skeleton. The reverse transcription-quantitative polymerase chain reaction (RT-qPCR) analysis and subcellular localization assay further support the involvement of OfPPO2 in acteoside biosynthesis in planta. These findings suggest that the biosynthesis of acteoside in O. fragrans may follow "parallel routes" rather than the conventionally considered linear route. In support of this hypothesis, the glycosyltransferase OfUGT and the acyltransferase OfAT could direct the flux of diphenolic intermediates generated by OfPPO2 into acteoside. Significantly, OfPPO2 and its orthologs constitute a functionally conserved enzyme family that evolved independently from other known biosynthetic enzymes of acteoside, implying that the substrate promiscuity of this PPO family may offer acteoside-producing plants alternative ways to synthesize acteoside. Overall, this work expands our understanding of parallel pathways plants may employ to efficiently synthesize acteoside, a strategy that may contribute to plants' adaptation to environmental challenges.


Asunto(s)
Catecol Oxidasa , Glucósidos , Fenoles , Proteínas de Plantas , Catecol Oxidasa/metabolismo , Catecol Oxidasa/genética , Glucósidos/metabolismo , Glucósidos/biosíntesis , Fenoles/metabolismo , Proteínas de Plantas/metabolismo , Proteínas de Plantas/genética , Vías Biosintéticas , Oleaceae/enzimología , Oleaceae/genética , Oleaceae/metabolismo , Catecoles/metabolismo , Regulación de la Expresión Génica de las Plantas , Polifenoles
8.
PLoS One ; 19(5): e0302745, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38776277

RESUMEN

Pigmented rice, especially black rice, is gaining popularity as it is rich in antioxidants such as anthocyanins and γ-oryzanol. At present, knowledge about temporal control of biosynthesis and accumulation of antioxidants during grain development is limited. To address this, the accumulation patterns of anthocyanins and γ-oryzanol were assessed in two distinct black rice genotypes over the course of grain development, and the expression of known regulatory genes for anthocyanin biosynthesis was examined. The results indicated that total γ-oryzanol content increased continuously throughout grain development, while total anthocyanins peaked at dough stage (15 to 21 days after flowering) followed by a decline until grain maturity in both genotypes. However, the rate of decrease in anthocyanin content differed between genotypes, and a more prominent decline in cyanidin 3-O-glucoside (C3G) relative to peonidin 3-O-glucoside (P3G) was observed for both. Anthocyanin content was closely linked with the expression of key regulatory genes in the MBW (MYB-bHLH-WD40) complex. This improved knowledge of the genotype-specific biosynthesis (anthocyanins only) and accumulation patterns of anthocyanins and γ-oryzanol can inform subsequent research efforts to increase concentrations of these key antioxidants in black rice grains.


Asunto(s)
Antocianinas , Oryza , Fenilpropionatos , Antocianinas/metabolismo , Antocianinas/biosíntesis , Oryza/metabolismo , Oryza/genética , Oryza/crecimiento & desarrollo , Fenilpropionatos/metabolismo , Regulación de la Expresión Génica de las Plantas , Genotipo , Glucósidos/metabolismo , Glucósidos/biosíntesis , Grano Comestible/metabolismo , Grano Comestible/genética , Grano Comestible/crecimiento & desarrollo , Antioxidantes/metabolismo , Proteínas de Plantas/metabolismo , Proteínas de Plantas/genética
9.
J Microbiol Biotechnol ; 34(5): 1154-1163, 2024 May 28.
Artículo en Inglés | MEDLINE | ID: mdl-38563097

RESUMEN

Glucosylation is a well-known approach to improve the solubility, pharmacological, and biological properties of flavonoids, making flavonoid glucosides a target for large-scale biosynthesis. However, the low yield of products coupled with the requirement of expensive UDP-sugars limits the application of enzymatic systems for large-scale. C. glutamicum is a Gram-positive and generally regarded as safe (GRAS) bacteria frequently employed for the large-scale production of amino acids and bio-fuels. Due to the versatility of its cell factory system and its non-endotoxin producing properties, it has become an attractive system for the industrial-scale biosynthesis of alternate products. Here, we explored the cell factory of C. glutamicum for efficient glucosylation of flavonoids using apigenin as a model flavonoid, with the heterologous expression of a promiscuous glycosyltransferase, YdhE from Bacillus licheniformis and the endogenous overexpression of C. glutamicum genes galU1 encoding UDP-glucose pyrophosphorylase and pgm encoding phosphoglucomutase involved in the synthesis of UDP-glucose to create a C. glutamicum cell factory system capable of efficiently glucosylation apigenin with a high yield of glucosides production. Consequently, the production of various apigenin glucosides was controlled under different temperatures yielding almost 4.2 mM of APG1(apigenin-4'-O-ß-glucoside) at 25°C, and 0.6 mM of APG2 (apigenin-7-O-ß-glucoside), 1.7 mM of APG3 (apigenin-4',7-O-ß-diglucoside) and 2.1 mM of APG4 (apigenin-4',5-O-ß-diglucoside) after 40 h of incubation with the supplementation of 5 mM of apigenin and 37°C. The cost-effective developed system could be used to modify a wide range of plant secondary metabolites with increased pharmacokinetic activities on a large scale without the use of expensive UDP-sugars.


Asunto(s)
Apigenina , Corynebacterium glutamicum , Glucósidos , Ingeniería Metabólica , Corynebacterium glutamicum/metabolismo , Corynebacterium glutamicum/genética , Apigenina/metabolismo , Ingeniería Metabólica/métodos , Glucósidos/metabolismo , Glucósidos/biosíntesis , Glicosilación , Bacillus licheniformis/metabolismo , Bacillus licheniformis/genética , Bacillus licheniformis/enzimología , Uridina Difosfato Glucosa/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/metabolismo , UTP-Glucosa-1-Fosfato Uridililtransferasa/metabolismo , UTP-Glucosa-1-Fosfato Uridililtransferasa/genética , Glicosiltransferasas/metabolismo , Glicosiltransferasas/genética
10.
Metab Eng ; 83: 1-11, 2024 May.
Artículo en Inglés | MEDLINE | ID: mdl-38447910

RESUMEN

Flavonoids are a diverse set of natural products with promising bioactivities including anti-inflammatory, anti-cancer, and neuroprotective properties. Previously, the oleaginous host Yarrowia lipolytica has been engineered to produce high titers of the base flavonoid naringenin. Here, we leverage this host along with a set of E. coli bioconversion strains to produce the flavone apigenin and its glycosylated derivative isovitexin, two potential nutraceutical and pharmaceutical candidates. Through downstream strain selection, co-culture optimization, media composition, and mutant isolation, we were able to produce168 mg/L of apigenin, representing a 46% conversion rate of 2-(R/S)-naringenin to apigenin. This apigenin platform was modularly extended to produce isovitexin by addition of a second bioconversion strain. Together, these results demonstrate the promise of microbial production and modular bioconversion to access diversified flavonoids.


Asunto(s)
Apigenina , Escherichia coli , Flavanonas , Ingeniería Metabólica , Yarrowia , Apigenina/metabolismo , Apigenina/biosíntesis , Flavanonas/biosíntesis , Flavanonas/metabolismo , Yarrowia/metabolismo , Yarrowia/genética , Escherichia coli/metabolismo , Escherichia coli/genética , Glucósidos/biosíntesis , Glucósidos/metabolismo
11.
J Agric Food Chem ; 70(5): 1601-1609, 2022 Feb 09.
Artículo en Inglés | MEDLINE | ID: mdl-35099964

RESUMEN

The combination of the insufficient availability and the complex structure of siamenoside I (SI), the sweetest glucoside isolated from Siraitia grosvenorii to date, limited its use as a natural sweetener. To solve this problem, an improved biocatalyst, UGT-M2, was semi-rationally created by engineering the uridine diphosphate glycosyltransferase UGT94-289-2 from S. grosvenorii for the monoglucosylation of mogroside IIIE (MG IIIE) to SI. Subsequently, an engineered Escherichia coli cell was constructed, which combined UGT-M2 with a UDP-glucose regeneration system to circumvent the need for expensive UDP-glucose to produce SI. After optimization, high-purity SI (>96.4%) was efficiently prepared from MG IIIE at a 1 L scale with a productivity of 29.78 g/(L day) and a molar yield of 76.5% and without using exogenous UDP-glucose. This study not only developed a whole-cell approach for the preparation of SI but also provided an alternative glycosyltransferase variant for SI biosynthesis with synthetic biology in the future.


Asunto(s)
Cucurbitaceae , Glucósidos/biosíntesis , Glicosiltransferasas , Uridina Difosfato , Cucurbitaceae/química , Escherichia coli/genética , Glicosiltransferasas/genética , Ingeniería de Proteínas , Uridina Difosfato Glucosa
12.
Chem Commun (Camb) ; 58(15): 2472-2475, 2022 Feb 17.
Artículo en Inglés | MEDLINE | ID: mdl-35084410

RESUMEN

A novel and efficient 2''-O-glycosyltransferase ZjOGT38 was identified from Ziziphus jujuba. It could regio-selectively glycosylate 2-hydroxyflavanone C-glycosides. ZjOGT38 allowed de novo biosynthesis of isovitexin 2''-O-glucoside in E. coli.


Asunto(s)
Glucósidos/biosíntesis , Glicosiltransferasas/metabolismo , Isoflavonas/biosíntesis , Ziziphus/enzimología , Glucósidos/química , Isoflavonas/química , Estructura Molecular
13.
Plant J ; 108(4): 1037-1052, 2021 11.
Artículo en Inglés | MEDLINE | ID: mdl-34519122

RESUMEN

Rambutan is a popular tropical fruit known for its exotic appearance, has long flexible spines on shells, extraordinary aril growth, desirable nutrition, and a favorable taste. The genome of an elite rambutan cultivar Baoyan 7 was assembled into 328 Mb in 16 pseudo-chromosomes. Comparative genomics analysis between rambutan and lychee revealed that rambutan chromosomes 8 and 12 are collinear with lychee chromosome 1, which resulted in a chromosome fission event in rambutan (n = 16) or a fusion event in lychee (n = 15) after their divergence from a common ancestor 15.7 million years ago. Root development genes played a crucial role in spine development, such as endoplasmic reticulum pathway genes, jasmonic acid response genes, vascular bundle development genes, and K+ transport genes. Aril development was regulated by D-class genes (STK and SHP1), plant hormone and phenylpropanoid biosynthesis genes, and sugar metabolism genes. The lower rate of male sterility of hermaphroditic flowers appears to be regulated by MYB24. Population genomic analyses revealed genes in selective sweeps during domestication that are related to fruit morphology and environment stress response. These findings enhance our understanding of spine and aril development and provide genomic resources for rambutan improvement.


Asunto(s)
Frutas/genética , Redes Reguladoras de Genes/genética , Genoma de Planta/genética , Sapindaceae/genética , Transcriptoma , Adaptación Fisiológica , Domesticación , Flores/genética , Flores/crecimiento & desarrollo , Frutas/crecimiento & desarrollo , Perfilación de la Expresión Génica , Genómica , Glucósidos/biosíntesis , Taninos Hidrolizables , Anotación de Secuencia Molecular , Fotosíntesis , Sapindaceae/crecimiento & desarrollo , Especificidad de la Especie , Gusto
14.
Genome Biol ; 22(1): 260, 2021 09 06.
Artículo en Inglés | MEDLINE | ID: mdl-34488839

RESUMEN

BACKGROUND: Drought is a major environmental disaster that causes crop yield loss worldwide. Metabolites are involved in various environmental stress responses of plants. However, the genetic control of metabolomes underlying crop environmental stress adaptation remains elusive. RESULTS: Here, we perform non-targeted metabolic profiling of leaves for 385 maize natural inbred lines grown under well-watered as well as drought-stressed conditions. A total of 3890 metabolites are identified and 1035 of these are differentially produced between well-watered and drought-stressed conditions, representing effective indicators of maize drought response and tolerance. Genetic dissections reveal the associations between these metabolites and thousands of single-nucleotide polymorphisms (SNPs), which represented 3415 metabolite quantitative trait loci (mQTLs) and 2589 candidate genes. 78.6% of mQTLs (2684/3415) are novel drought-responsive QTLs. The regulatory variants that control the expression of the candidate genes are revealed by expression QTL (eQTL) analysis of the transcriptomes of leaves from 197 maize natural inbred lines. Integrated metabolic and transcriptomic assays identify dozens of environment-specific hub genes and their gene-metabolite regulatory networks. Comprehensive genetic and molecular studies reveal the roles and mechanisms of two hub genes, Bx12 and ZmGLK44, in regulating maize metabolite biosynthesis and drought tolerance. CONCLUSION: Our studies reveal the first population-level metabolomes in crop drought response and uncover the natural variations and genetic control of these metabolomes underlying crop drought adaptation, demonstrating that multi-omics is a powerful strategy to dissect the genetic mechanisms of crop complex traits.


Asunto(s)
Adaptación Fisiológica/genética , Sequías , Genómica , Metaboloma/genética , Zea mays/genética , Zea mays/fisiología , Benzoxazinas , Vías Biosintéticas/genética , Regulación de la Expresión Génica de las Plantas , Estudios de Asociación Genética , Variación Genética , Glucósidos/biosíntesis , Redes y Vías Metabólicas/genética , Metabolómica , Anotación de Secuencia Molecular , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Sitios de Carácter Cuantitativo/genética , Triptófano/metabolismo
15.
J Am Chem Soc ; 143(36): 14676-14683, 2021 09 15.
Artículo en Inglés | MEDLINE | ID: mdl-34460264

RESUMEN

The recently discovered modular glucosides (MOGLs) form a large metabolite library derived from combinatorial assembly of moieties from amino acid, neurotransmitter, and lipid metabolism in the model organism C. elegans. Combining CRISPR-Cas9 genome editing, comparative metabolomics, and synthesis, we show that the carboxylesterase homologue Cel-CEST-1.2 is responsible for specific 2-O-acylation of diverse glucose scaffolds with a wide variety of building blocks, resulting in more than 150 different MOGLs. We further show that this biosynthetic role is conserved for the closest homologue of Cel-CEST-1.2 in the related nematode species C. briggsae, Cbr-CEST-2. Expression of Cel-cest-1.2 and MOGL biosynthesis are strongly induced by starvation conditions in C. elegans, one of the premier model systems for mechanisms connecting nutrition and physiology. Cel-cest-1.2-deletion results in early death of adult animals under starvation conditions, providing first insights into the biological functions of MOGLs.


Asunto(s)
Proteínas de Caenorhabditis elegans/metabolismo , Caenorhabditis elegans/metabolismo , Hidrolasas de Éster Carboxílico/metabolismo , Glucósidos/biosíntesis , Inanición/metabolismo , Acilación , Animales , Glucósidos/química , Metabolómica , ortoaminobenzoatos/metabolismo
16.
Int J Mol Sci ; 22(16)2021 Aug 09.
Artículo en Inglés | MEDLINE | ID: mdl-34445254

RESUMEN

Nitrogen forms (nitrate (NO3-) or ammonium (NH4+)) are vital to plant growth and metabolism. In stevia (Stevia rebaudiana), it is important to assess whether nitrogen forms can influence the synthesis of the high-value terpene metabolites-steviol glycosides (SGs), together with the underlying mechanisms. Field and pot experiments were performed where stevia plants were fertilized with either NO3- or NH4+ nutrition to the same level of nitrogen. Physiological measurements suggested that nitrogen forms had no significant impact on biomass and the total nitrogen content of stevia leaves, but NO3--enhanced leaf SGs contents. Transcriptomic analysis identified 397 genes that were differentially expressed (DEGs) between NO3- and NH4+ treatments. Assessment of the DEGs highlighted the responses in secondary metabolism, particularly in terpenoid metabolism, to nitrogen forms. Further examinations of the expression patterns of SGs synthesis-related genes and potential transcription factors suggested that GGPPS and CPS genes, as well as the WRKY and MYB transcription factors, could be driving N form-regulated SG synthesis. We concluded that NO3-, rather than NH4+, can promote leaf SG synthesis via the NO3--MYB/WRKY-GGPPS/CPS module. Our study suggests that insights into the molecular mechanism of how SG synthesis can be affected by nitrogen forms.


Asunto(s)
Amoníaco/farmacología , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Glucósidos/biosíntesis , Nitratos/metabolismo , Stevia/metabolismo , Transcripción Genética/efectos de los fármacos , Diterpenos de Tipo Kaurano , Perfilación de la Expresión Génica , Glucósidos/genética , Nitratos/farmacología , Stevia/genética
17.
Nat Plants ; 7(7): 923-931, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-34226693

RESUMEN

Faba bean (Vicia faba L.) is a widely adapted and high-yielding legume cultivated for its protein-rich seeds1. However, the seeds accumulate the pyrimidine glucosides vicine and convicine, which can cause haemolytic anaemia (favism) in 400 million genetically predisposed individuals2. Here, we use gene-to-metabolite correlations, gene mapping and genetic complementation to identify VC1 as a key enzyme in vicine and convicine biosynthesis. We demonstrate that VC1 has GTP cyclohydrolase II activity and that the purine GTP is a precursor of both vicine and convicine. Finally, we show that cultivars with low vicine and convicine levels carry an inactivating insertion in the coding sequence of VC1. Our results reveal an unexpected, purine rather than pyrimidine, biosynthetic origin for vicine and convicine and pave the way for the development of faba bean cultivars that are free of these anti-nutrients.


Asunto(s)
Catálisis , Glucósidos/biosíntesis , Hidrolasas/metabolismo , Pirimidinonas/metabolismo , Semillas/metabolismo , Vicia faba/genética , Vicia faba/metabolismo , Productos Agrícolas/genética , Productos Agrícolas/metabolismo , Dinamarca , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Glucósidos/genética , Hidrolasas/genética , Semillas/genética
18.
Microb Cell Fact ; 20(1): 79, 2021 Apr 07.
Artículo en Inglés | MEDLINE | ID: mdl-33827582

RESUMEN

BACKGROUND: Glucosylglycerol (2-O-α-D-glucosyl-sn-glycerol; GG) is a natural osmolyte from bacteria and plants. It has promising applications as cosmetic and food-and-feed ingredient. Due to its natural scarcity, GG must be prepared through dedicated synthesis, and an industrial bioprocess for GG production has been implemented. This process uses sucrose phosphorylase (SucP)-catalyzed glycosylation of glycerol from sucrose, applying the isolated enzyme in immobilized form. A whole cell-based enzyme formulation might constitute an advanced catalyst for GG production. Here, recombinant production in Escherichia coli BL21(DE3) was compared systematically for the SucPs from Leuconostoc mesenteroides (LmSucP) and Bifidobacterium adolescentis (BaSucP) with the purpose of whole cell catalyst development. RESULTS: Expression from pQE30 and pET21 plasmids in E. coli BL21(DE3) gave recombinant protein at 40-50% share of total intracellular protein, with the monomeric LmSucP mostly soluble (≥ 80%) and the homodimeric BaSucP more prominently insoluble (~ 40%). The cell lysate specific activity of LmSucP was 2.8-fold (pET21; 70 ± 24 U/mg; N = 5) and 1.4-fold (pQE30; 54 ± 9 U/mg, N = 5) higher than that of BaSucP. Synthesis reactions revealed LmSucP was more regio-selective for glycerol glycosylation (~ 88%; position O2 compared to O1) than BaSucP (~ 66%), thus identifying LmSucP as the enzyme of choice for GG production. Fed-batch bioreactor cultivations at controlled low specific growth rate (µ = 0.05 h-1; 28 °C) for LmSucP production (pET21) yielded ~ 40 g cell dry mass (CDM)/L with an activity of 2.0 × 104 U/g CDM, corresponding to 39 U/mg protein. The same production from the pQE30 plasmid gave a lower yield of 6.5 × 103 U/g CDM, equivalent to 13 U/mg. A single freeze-thaw cycle exposed ~ 70% of the intracellular enzyme activity for GG production (~ 65 g/L, ~ 90% yield from sucrose), without releasing it from the cells during the reaction. CONCLUSIONS: Compared to BaSucP, LmSucP is preferred for regio-selective GG production. Expression from pET21 and pQE30 plasmids enables high-yield bioreactor production of the enzyme as a whole cell catalyst. The freeze-thaw treated cells represent a highly active, solid formulation of the LmSucP for practical synthesis.


Asunto(s)
Escherichia coli/metabolismo , Glucósidos/biosíntesis , Proteínas Recombinantes/biosíntesis
19.
Bioorg Chem ; 112: 104926, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-33930665

RESUMEN

Orientin and vitexin, important components of bamboo-leaf extracts, are C-glycosylflavones which exhibit a number of interesting biological properties. In this work, we developed an efficient biocatalytic cascade for orientin and vitexin production consisting of Trollius chinensis C-glycosyltransferase (TcCGT) and Glycine max sucrose synthase (GmSUS). In order to relieve the bottleneck of the biocatalytic cascade, the biocatalytic efficiency, reaction condition compatibilities and the ratio of the enzymes were determined. We found that the specific activity of TcCGT was significantly influenced by enzyme dose and Triton X-100 or Tween 20 (0.2%). Co-culture of BL21-TcCGT-Co and BL21-GmSUS-Co affected the catalytic efficiency of TcCGT and GmSUS, and the maximum orientin production rate reached 47 µM/min at the inoculation ratio of 9:1. The optimal pH and temperature for the biocatalytic cascade were pH 7.5 and 30 °C, respectively. Moreover, the high dose of the enzymes can improve the tolerance of biocatalytic cascade to substrate inhibition in the one-pot reaction. By using a fed-batch strategy, maximal titers of orientin and vitexin reached 7090 mg/L with a corresponding molar conversion of 98.7% and 5050 mg/L with a corresponding molar conversion of 97.3%, respectively, which is the highest titer reported to date. Therefore, the method described herein for efficient production of orientin and vitexin by modulating catalytic efficiencies of enzymes can be widely used for the C-glycosylation of flavonoids.


Asunto(s)
Apigenina/biosíntesis , Flavonoides/biosíntesis , Glucósidos/biosíntesis , Glucosiltransferasas/metabolismo , Glicosiltransferasas/metabolismo , Apigenina/aislamiento & purificación , Biocatálisis , Flavonoides/aislamiento & purificación , Glucósidos/aislamiento & purificación , Ranunculaceae/enzimología , Glycine max/enzimología
20.
Biosci Biotechnol Biochem ; 85(5): 1165-1169, 2021 Apr 24.
Artículo en Inglés | MEDLINE | ID: mdl-33784734

RESUMEN

Analyses of metabolite secretions by field-grown plants remain scarce. We analyzed daidzein secretion by field-grown soybean. Daidzein secretion was higher during early vegetative stages than reproductive stages, a trend that was also seen for hydroponically grown soybean. Daidzein secretion was up to 10 000-fold higher under field conditions than hydroponic conditions, leading to a more accurate simulation of rhizosphere daidzein content.


Asunto(s)
Glycine max/metabolismo , Isoflavonas/biosíntesis , Hojas de la Planta/metabolismo , Raíces de Plantas/metabolismo , Genisteína/aislamiento & purificación , Genisteína/metabolismo , Glucósidos/biosíntesis , Glucósidos/aislamiento & purificación , Hidroponía/métodos , Isoflavonas/aislamiento & purificación , Especificidad de Órganos , Hojas de la Planta/crecimiento & desarrollo , Raíces de Plantas/crecimiento & desarrollo , Rizosfera , Glycine max/crecimiento & desarrollo
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