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1.
J Biosci Bioeng ; 138(3): 212-217, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-38969547

RESUMEN

We constructed a new Aspergillus expression vector (pSENSU2512nid) under the control of the enolase promoter with 12 tandem repeats of cis-acting elements (region III) and the heat shock protein 12 (Hsp12) 5' untranslated region (UTR). Bilirubin oxidase (EC: 1.3.3.5) from Myrothecium verrucaria, which catalyzes the oxidation of bilirubin to biliverdin, was overexpressed in Aspergillus oryzae and A. niger. The productivity was estimated to be approximately 1.2 g/L in the culture broth, which was approximately 6-fold higher than that of recombinant bilirubin oxidase (BOD) expressed in Pichia pastoris (Komagataella phaffii). BOD was purified using hydrophobic interaction chromatography, followed by ion exchange chromatography. The specific activity of the purified BOD against 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) substrate was 57.6 U/mg and 66.4 U/mg for A. oryzae and A. niger, respectively. l-Ascorbic acid (4 mM) addition and storage under deoxygenated conditions for 3-7 d increased the specific activity of these Aspergillus-expressed BODs approximately 2.3-fold (154.1 U/mg). The BOD specific activity was enhanced by incubation at higher temperature (30-50 °C). Further characterization of the enzyme catalytic efficiency revealed that the Km value remained unchanged, whereas the kcat value improved 3-fold. In conclusion, this high-level of BOD expression meets the requirements for industrial-level production. Additionally, we identified an effective method to enhance the low specific activity during expression, making it advantageous for industrial applications.


Asunto(s)
Hypocreales , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH , Proteínas Recombinantes , Hypocreales/enzimología , Hypocreales/genética , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/química , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/metabolismo , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/genética , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/química , Aspergillus/enzimología , Aspergillus/genética , Aspergillus oryzae/enzimología , Aspergillus oryzae/genética , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/química , Aspergillus niger/enzimología , Aspergillus niger/genética , Saccharomycetales/genética , Saccharomycetales/enzimología , Saccharomycetales/metabolismo , Vectores Genéticos/metabolismo , Regiones Promotoras Genéticas
2.
Int J Biol Macromol ; 276(Pt 2): 134030, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39038578

RESUMEN

This study investigates the synthesis of (hemi)cellulolytic enzymes, including endoglucanase (CMCase), xylanase, and ß-glucosidase, employing Trichoderma reesei RUT-C30 and deoiled oil palm mesocarp fiber (OPMF) through solid-state fermentation (SSF). The objective was to determine the optimal process conditions for achieving high enzyme activities through a one-factor-at-a-time approach. The study primarily focused on the impact of the solid-to-liquid ratio, incubation period, initial pH, and temperature on enzyme activity. The effects of OPMF pretreatment, particularly deoiling and fortification, were explored. This approach significantly improved enzyme activity levels compared to the initial conditions, with CMCase increasing by 111.6 %, xylanase by 665.2 %, and ß-Glucosidase by 1678.1 %. Xylanase and ß-glucosidase activities, peaking at 1346.75 and 9.89 IU per gram dry substrate (GDS), respectively, under optimized conditions (1:4 ratio, pH 7.5, 20 °C, 9-day incubation). With lower moisture levels, CMCase reached its maximum activity of 227.84 IU/GDS. The study highlights how important it is for agro-industrial byproducts to support environmentally sustainable practices in the palm oil industry. It also emphasizes how differently each enzyme reacts to changes in process parameters.


Asunto(s)
Fermentación , Aceite de Palma , Temperatura , Aceite de Palma/química , Concentración de Iones de Hidrógeno , Celulasa/metabolismo , Hypocreales/enzimología , beta-Glucosidasa/metabolismo , Endo-1,4-beta Xilanasas/metabolismo , Celulosa/química , Celulosa/metabolismo
3.
Int J Biol Macromol ; 276(Pt 2): 133970, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39029816

RESUMEN

Chitinase plays a vital role in the virulence of entomopathogenic fungi (EPF) when it infects host insects. We used gene recombination technology to express chitinase of three strains of Lecanicillium lecanii: Vl6063, V3450, and Vp28. The ORF of ChitVl6063, ChitV3450 and ChitVp28 were inserted into the fungal expression vector pBARGPE-1, which contained strong promoter and terminator, respectively, to construct a chitinase overpressing plasmid, then transformed the wild-type strain with blastospore transformation method. The virulence of the three recombinant strains against Toxoptera aurantii was improved by overproduction of ChitVl6063, ChitV3450, and ChitVp28, as demonstrated by significantly lower 3.43 %, 1.72 %, and 1.23 % fatal doses, respectively, according to an insect bioassay. Similarly, lethal times of recombinants (ChitVl6063, ChitV3450 and ChitVp28) were also decreased up to 29.51 %, 30.46 % and 33.90 %, respectively, compared to the wild-type strains. Improving the expression of chitinase is considered as an effective method for the enhancement of the EPF value. The efficacy could be enhanced using recombinant technology, which provides a prospecting view for future insecticidal applications.


Asunto(s)
Áfidos , Quitinasas , Hypocreales , Quitinasas/genética , Quitinasas/metabolismo , Animales , Áfidos/genética , Hypocreales/genética , Hypocreales/patogenicidad , Hypocreales/enzimología , Virulencia/genética , Citrus/microbiología , Citrus/parasitología , Control Biológico de Vectores/métodos
4.
Int J Biol Macromol ; 277(Pt 2): 134133, 2024 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-39074704

RESUMEN

In recent years, numerous attempts have been made to develop a low-cost adsorbent for selectively recovering industrially important products from fermentation broth or complex mixtures. The current study is a novel attempt to selectively adsorb esterase from Trichoderma harzianum using cheap adsorbents like bentonite (BT), activated charcoal (AC), silicon dioxide (SiO2), and titanium dioxide (TiO2). AC had the highest esterase adsorption of 97.58% due to its larger surface area of 594.45 m3/g. SiO2 was found to have the highest selectivity over esterase, with an estimated purification fold of 7.2. Interestingly, the purification fold of 5.5 was found in the BT-extracted fermentation broth. The functional (FT-IR) and morphological analysis (SEM-EDX) were used to characterize the adsorption of esterase. Esterase adsorption on AC, SiO2, and TiO2 was well fitted by Freundlich isotherm, demonstrating multilayer adsorption of esterase. A pseudo-second-order kinetic model was developed for esterase adsorption in various adsorbents. Thermodynamic analysis revealed that adsorption is an endothermic process. AC has the lowest Gibbs free energy of -10.96 kJ/mol, which supports the spontaneous maximum adsorption of both esterase and protein. In the desorption study, the maximum recovery of esterase from TiO2 using sodium chloride was 41.34 %. Unlike other adsorbents, the AC-adsorbed esterase maintained its catalytic activity and stability, implying that it could be used as an immobilization system for commercial applications. According to the kinetic analysis, the overall rate of the reaction was controlled by reaction kinetics rather than external mass transfer resistance, as indicated by the Damkohler number.


Asunto(s)
Esterasas , Adsorción , Cinética , Esterasas/metabolismo , Esterasas/química , Esterasas/aislamiento & purificación , Carbón Orgánico/química , Titanio/química , Termodinámica , Dióxido de Silicio/química , Hypocreales/enzimología , Biocatálisis , Bentonita/química
5.
Commun Biol ; 7(1): 757, 2024 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-38909167

RESUMEN

N-methyltransferase (NMT)-catalyzed methylation at the termini of nonribosomal peptides (NRPs) has rarely been reported. Here, we discover a fungal NMT LcsG for the iterative terminal N-methylation of a family of NRPs, leucinostatins. Gene deletion results suggest that LcsG is essential for leucinostatins methylation. Results from in vitro assays and HRESI-MS-MS analysis reveal the methylation sites as NH2, NHCH3 and N(CH3)2 in the C-terminus of various leucinostatins. LcsG catalysis yields new lipopeptides, some of which demonstrate effective antibiotic properties against the human pathogen Cryptococcus neoformans and the plant pathogen Phytophthora infestans. Multiple sequence alignments and site-directed mutagenesis of LcsG indicate the presence of a highly conserved SAM-binding pocket, along with two possible active site residues (D368 and D395). Molecular dynamics simulations show that the targeted N can dock between these two residues. Thus, this study suggests a method for increasing the variety of natural bioactivity of NPRs and a possible catalytic mechanism underlying the N-methylation of NRPs.


Asunto(s)
Cryptococcus neoformans , Hypocreales , Metiltransferasas , Metiltransferasas/metabolismo , Metiltransferasas/genética , Metiltransferasas/química , Metilación , Hypocreales/enzimología , Hypocreales/genética , Cryptococcus neoformans/enzimología , Cryptococcus neoformans/genética , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/química , Simulación de Dinámica Molecular , Phytophthora infestans/enzimología , Phytophthora infestans/genética , Secuencia de Aminoácidos , Mutagénesis Sitio-Dirigida , Dominio Catalítico , Péptidos Catiónicos Antimicrobianos
6.
Microb Cell Fact ; 23(1): 150, 2024 May 24.
Artículo en Inglés | MEDLINE | ID: mdl-38790055

RESUMEN

BACKGROUND: Azo dyes represent a common textile dye preferred for its high stability on fabrics in various harsh conditions. Although these dyes pose high-risk levels for all biological forms, fungal laccase is known as a green catalyst for its ability to oxidize numerous dyes. METHODS: Trichoderma isolates were identified and tested for laccase production. Laccase production was optimized using Plackett-Burman Design. Laccase molecular weight and the kinetic properties of the enzyme, including Km and Vmax, pH, temperature, and ionic strength, were detected. Azo dye removal efficiency by laccase enzyme was detected for Congo red, methylene blue, and methyl orange. RESULTS: Eight out of nine Trichoderma isolates were laccase producers. Laccase production efficiency was optimized by the superior strain T. harzianum PP389612, increasing production from 1.6 to 2.89 U/ml. In SDS-PAGE, purified laccases appear as a single protein band with a molecular weight of 41.00 kDa. Km and Vmax values were 146.12 µmol guaiacol and 3.82 µmol guaiacol/min. Its activity was stable in the pH range of 5-7, with an optimum temperature range of 40 to 50 °C, optimum ionic strength of 50 mM NaCl, and thermostability properties up to 90 °C. The decolorization efficiency of laccase was increased by increasing the time and reached its maximum after 72 h. The highest efficiency was achieved in Congo red decolorization, which reached 99% after 72 h, followed by methylene blue at 72%, while methyl orange decolorization efficiency was 68.5%. CONCLUSION: Trichoderma laccase can be used as an effective natural bio-agent for dye removal because it is stable and removes colors very well.


Asunto(s)
Compuestos Azo , Colorantes , Lacasa , Temperatura , Lacasa/metabolismo , Lacasa/química , Lacasa/aislamiento & purificación , Compuestos Azo/metabolismo , Colorantes/metabolismo , Colorantes/química , Cinética , Concentración de Iones de Hidrógeno , Rojo Congo/metabolismo , Concentración Osmolar , Hypocreales/enzimología , Hypocreales/metabolismo , Biodegradación Ambiental , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/química , Proteínas Fúngicas/aislamiento & purificación
7.
Int J Biol Macromol ; 270(Pt 1): 131968, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38704059

RESUMEN

Enzymatic degradation of lignocellulosic biomass provides an eco-friendly approach to produce value-added macromolecules, e.g., bioactive polysaccharides. A novel acidophilic GH5 ß-1,4-endoglucanase (termed TaCel5) from Trichoderma asperellum ND-1 was efficiently expressed in Komagataella phaffii (∼1.5-fold increase, 38.42 U/mL). TaCel5 displayed both endoglucanase (486.3 U/mg) and alginate lyase (359.5 U/mg) enzyme activities. It had optimal pH 3.0 and strong pH stability (exceed 86 % activity retained over pH range 3.0-5.0). 80 % activity (both endoglucanase and alginate lyase) was retained in the presence of 15 % ethanol or 3.42 M NaCl. Analysis of action mode revealed that hydrolytic activity of TaCel5 required at least three glucose (cellotriose) residues, yielding mainly cellobiose. Glu241 and Glu352 are essential catalytic residues, while Asp106, Asp277 and Asp317 play auxiliary roles in cellulose degradation. TaCel5 displayed high hydrolysis efficiency for glucan and alginate substrates. ESI-MS analysis indicated that the enzymatic hydrolysates of alginate mainly contained disaccharides and heptasaccharides. This is the first detailed report of a bifunctional GH5 endoglucanase/alginate lyase enzyme from T. asperellum. Thus TaCel5 has strong potential in food and feed industries as a catalyst for bioconversion of cellulose- and alginate-containing waste materials into value-added products oligosaccharides, which was of great benefit both for the economy and environment.


Asunto(s)
Alginatos , Celulasa , Celulosa , Oligosacáridos , Alginatos/metabolismo , Alginatos/química , Celulasa/metabolismo , Celulasa/química , Oligosacáridos/metabolismo , Oligosacáridos/química , Hidrólisis , Celulosa/metabolismo , Concentración de Iones de Hidrógeno , Hypocreales/enzimología , Especificidad por Sustrato , Polisacárido Liasas/metabolismo , Polisacárido Liasas/química , Polisacárido Liasas/genética
8.
Microb Cell Fact ; 23(1): 120, 2024 Apr 26.
Artículo en Inglés | MEDLINE | ID: mdl-38664812

RESUMEN

BACKGROUND: The conversion of plant biomass into biochemicals is a promising way to alleviate energy shortage, which depends on efficient microbial saccharification and cellular metabolism. Trichoderma spp. have plentiful CAZymes systems that can utilize all-components of lignocellulose. Acetylation of polysaccharides causes nanostructure densification and hydrophobicity enhancement, which is an obstacle for glycoside hydrolases to hydrolyze glycosidic bonds. The improvement of deacetylation ability can effectively release the potential for polysaccharide degradation. RESULTS: Ammonium sulfate addition facilitated the deacetylation of xylan by inducing the up-regulation of multiple carbohydrate esterases (CE3/CE4/CE15/CE16) of Trichoderma harzianum. Mainly, the pathway of ammonium-sulfate's cellular assimilates inducing up-regulation of the deacetylase gene (Thce3) was revealed. The intracellular metabolite changes were revealed through metabonomic analysis. Whole genome bisulfite sequencing identified a novel differentially methylated region (DMR) that existed in the ThgsfR2 promoter, and the DMR was closely related to lignocellulolytic response. ThGsfR2 was identified as a negative regulatory factor of Thce3, and methylation in ThgsfR2 promoter released the expression of Thce3. The up-regulation of CEs facilitated the substrate deacetylation. CONCLUSION: Ammonium sulfate increased the polysaccharide deacetylation capacity by inducing the up-regulation of multiple carbohydrate esterases of T. harzianum, which removed the spatial barrier of the glycosidic bond and improved hydrophilicity, and ultimately increased the accessibility of glycosidic bond to glycoside hydrolases.


Asunto(s)
Esterasas , Metionina , Esterasas/metabolismo , Esterasas/genética , Metionina/metabolismo , Xilanos/metabolismo , Sulfato de Amonio/metabolismo , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/genética , Hypocreales/metabolismo , Hypocreales/enzimología , Hypocreales/genética , Lignina/metabolismo , Acetilación
9.
Proc Natl Acad Sci U S A ; 121(18): e2322567121, 2024 Apr 30.
Artículo en Inglés | MEDLINE | ID: mdl-38648472

RESUMEN

Degrading cellulose is a key step in the processing of lignocellulosic biomass into bioethanol. Cellobiose, the disaccharide product of cellulose degradation, has been shown to inhibit cellulase activity, but the mechanisms underlying product inhibition are not clear. We combined single-molecule imaging and biochemical investigations with the goal of revealing the mechanism by which cellobiose inhibits the activity of Trichoderma reesei Cel7A, a well-characterized exo-cellulase. We find that cellobiose slows the processive velocity of Cel7A and shortens the distance moved per encounter; effects that can be explained by cellobiose binding to the product release site of the enzyme. Cellobiose also strongly inhibits the binding of Cel7A to immobilized cellulose, with a Ki of 2.1 mM. The isolated catalytic domain (CD) of Cel7A was also inhibited to a similar degree by cellobiose, and binding of an isolated carbohydrate-binding module to cellulose was not inhibited by cellobiose, suggesting that cellobiose acts on the CD alone. Finally, cellopentaose inhibited Cel7A binding at micromolar concentrations without affecting the enzyme's velocity of movement along cellulose. Together, these results suggest that cellobiose inhibits Cel7A activity both by binding to the "back door" product release site to slow activity and to the "front door" substrate-binding tunnel to inhibit interaction with cellulose. These findings point to strategies for engineering cellulases to reduce product inhibition and enhance cellulose degradation, supporting the growth of a sustainable bioeconomy.


Asunto(s)
Celobiosa , Celulasa , Celulosa , Hypocreales , Celobiosa/metabolismo , Celulasa/metabolismo , Celulasa/antagonistas & inhibidores , Celulosa/metabolismo , Hypocreales/enzimología , Hypocreales/metabolismo , Imagen Individual de Molécula/métodos , Dominio Catalítico , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/antagonistas & inhibidores , Proteínas Fúngicas/química
10.
Biotechnol Bioeng ; 121(6): 1927-1936, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38501733

RESUMEN

Understanding the reaction mechanisms involved in the enzymatic hydrolysis of cellulose is important because it is kinetically the most limiting step of the bioethanol production process. The present work focuses on the enzymatic deactivation at the air-liquid interface, which is one of the aspects contributing to this global deactivation. This phenomenon has already been experimentally proven, but this is the first time that a model has been proposed to describe it. Experiments were performed by incubating Celluclast cocktail solutions on an orbital stirring system at different enzyme concentrations and different surface-to-volume ratios. A 5-day follow-up was carried out by measuring the global FPase activity of cellulases for each condition tested. The activity loss was proven to depend on both the air-liquid surface area and the enzyme concentration. Both observations suggest that the loss of activity takes place at the air-liquid surface, the total amount of enzymes varying with volume or enzyme concentration. Furthermore, tests performed using five individual enzymes purified from a Trichoderma reesei cocktail showed that the only cellulase that is deactivated at the air-liquid interface is cellobiohydrolase II. From the experimental data collected by varying the initial enzyme concentration and the ratio surface to volume, it was possible to develop, for the first time, a model that describes the loss of activity at the air-liquid interface for this configuration.


Asunto(s)
Celulasas , Celulasas/metabolismo , Celulasas/química , Hypocreales/enzimología , Activación Enzimática , Celulosa/metabolismo , Celulosa/química , Hidrólisis , Aire
11.
Prep Biochem Biotechnol ; 54(7): 967-973, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38327105

RESUMEN

Trichoderma reesei RUT-C30 was cultivated on differentially pretreated rice straw and pure cellulose as a carbon source/inducer for cellulase production, and the enzymes were evaluated for hydrolysis of sequential acid and alkali pretreated rice straw. Growth on pretreated rice straw enhanced protein secretion and cellulase activities compared to pure cellulose as a carbon source. The yield of cellulolytic enzymes was higher for alkali pretreated rice straw (ALP-RS), while H2O2-treated (HP-RS) could not induce cellulases to a larger level compared to pure cellulose. Protein concentration was 3.5-fold higher on ALP-RS as compared to pure cellulose, with a maximum filter-paper cellulase (FPase) activity of 1.76 IU/ml and carboxy-methyl cellulase (CMCase) activity of 40.16 IU/ml (2.18 fold higher). Beta-glucosidase (BGL) activity was more or less the same with the different substrates and supplementation of heterologous BGL could result in a quantum jump in hydrolytic efficiencies, which in the case of ALP-RS induced enzymes was 34% (increased from 69.26% to 92.51%). The use of lignocellulosic biomass (LCB) itself as a substrate for the production of cellulase is advantageous not only in terms of raw material costs but also for obtaining a more suitable enzyme profile for biomass hydrolysis.


Asunto(s)
Celulasa , Hypocreales , Oryza , Oryza/química , Hidrólisis , Celulasa/metabolismo , Celulasa/química , Hypocreales/enzimología , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/química , Celulosa/metabolismo , Celulosa/química , Lignina/metabolismo , Lignina/química , Biomasa , beta-Glucosidasa/metabolismo , beta-Glucosidasa/química
12.
Pest Manag Sci ; 80(7): 3401-3411, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38407453

RESUMEN

BACKGROUND: Despite their known negative effects on ecosystems and human health, synthetic pesticides are still largely used to control crop insect pests. Currently, the biopesticide market for insect biocontrol mainly relies on the entomopathogenic bacterium Bacillus thuringiensis (Bt). New biocontrol tools for crop protection might derive from fungi, in particular from Trichoderma spp., which are known producers of chitinases and other bioactive compounds able to negatively affect insect survival. RESULTS: In this study, we first developed an environmentally sustainable production process for obtaining chitinases from Trichoderma asperellum ICC012. Then, we investigated the biological effects of this chitinase preparation - alone or in combination with a Bt-based product - when orally administered to two lepidopteran species. Our results demonstrate that T. asperellum efficiently produces a multi-enzymatic cocktail able to alter the chitin microfibril network of the insect peritrophic matrix, resulting in delayed development and larval death. The co-administration of T. asperellum chitinases and sublethal concentrations of Bt toxins increased larval mortality. This synergistic effect was likely due to the higher amount of Bt toxins that passed the damaged peritrophic matrix and reached the target receptors on the midgut cells of chitinase-treated insects. CONCLUSION: Our findings may contribute to the development of an integrated pest management technology based on fungal chitinases that increase the efficacy of Bt-based products, mitigating the risk of Bt-resistance development. © 2024 Society of Chemical Industry.


Asunto(s)
Bacillus thuringiensis , Quitinasas , Larva , Mariposas Nocturnas , Control Biológico de Vectores , Quitinasas/metabolismo , Animales , Mariposas Nocturnas/efectos de los fármacos , Mariposas Nocturnas/crecimiento & desarrollo , Larva/crecimiento & desarrollo , Larva/efectos de los fármacos , Hypocreales/enzimología , Proteínas Fúngicas/metabolismo , Agentes de Control Biológico/farmacología
13.
Biosci Biotechnol Biochem ; 87(3): 330-337, 2023 Feb 24.
Artículo en Inglés | MEDLINE | ID: mdl-36592961

RESUMEN

A novel enzyme, 4-O-α-d-isomaltooligosaccharylmaltooligosaccharide 1,4-α-isomaltooligosaccharohydrolase (IMM-4IH), was previously discovered from Sarocladium kiliense U4520. In order to identify the factors underlying the unique substrate specificity of IMM-4IH, we endeavored to determine the amino acid sequence of the enzyme. By comparing the partial amino acid sequence of the enzyme to whole genome sequencing data of S. kiliense U4520, the IMM-4IH gene was estimated. The putative gene was expressed in Pichia pastoris, and its activity and properties were found to be consistent with those of the native enzyme. Comparing the amino acid sequence of IMM-4IH with those in the CAZy database led to classification in the glycoside hydrolase family 49 (GH49). Several amino acids important for catalysis (Asp406, Asp425, and Asp426) and substrate recognition at subsites + 1 and -3 were estimated by multiple sequence alignment analysis. These results provide important information for characterizing IMM-4IH and other GH49 enzymes.


Asunto(s)
Glicósido Hidrolasas , Hypocreales , Secuencia de Aminoácidos , Clonación Molecular , Glicósido Hidrolasas/química , Glicósido Hidrolasas/genética , Análisis de Secuencia , Especificidad por Sustrato , Hypocreales/enzimología , Hypocreales/genética , Proteínas Fúngicas/química , Proteínas Fúngicas/genética
14.
Molecules ; 27(3)2022 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-35163952

RESUMEN

The investigation for novel unique extremozymes is a valuable business for which the marine environment has been overlooked. The marine fungus Clonostachys rosea IG119 was tested for growth and chitinolytic enzyme production at different combinations of salinity and pH using response surface methodology. RSM modelling predicted best growth in-between pH 3.0 and 9.0 and at salinity of 0-40‱, and maximum enzyme activity (411.137 IU/L) at pH 6.4 and salinity 0‱; however, quite high production (>390 IU/L) was still predicted at pH 4.5-8.5. The highest growth and activity were obtained, respectively, at pH 4.0 and 8.0, in absence of salt. The crude enzyme was tested at different salinities (0-120‱) and pHs (2.0-13.0). The best activity was achieved at pH 4.0, but it was still high (in-between 3.0 and 12.0) at pH 2.0 and 13.0. Salinity did not affect the activity in all tested conditions. Overall, C. rosea IG119 was able to grow and produce chitinolytic enzymes under polyextremophilic conditions, and its crude enzyme solution showed more evident polyextremophilic features. The promising chitinolytic activity of IG119 and the peculiar characteristics of its chitinolytic enzymes could be suitable for several biotechnological applications (i.e., degradation of salty chitin-rich materials and biocontrol of spoiling organisms, possibly solving some relevant environmental issues).


Asunto(s)
Quitinasas/metabolismo , Hypocreales/enzimología , Hypocreales/metabolismo , Biotecnología , Quitina/química , Quitinasas/aislamiento & purificación , Extremófilos/aislamiento & purificación , Extremófilos/metabolismo , Fermentación , Salinidad
15.
Sci Rep ; 12(1): 501, 2022 01 11.
Artículo en Inglés | MEDLINE | ID: mdl-35017559

RESUMEN

Plant immune receptors are often difficult to express heterologously, hindering study of direct interactions between these receptors and their targets with traditional biochemical approaches. The cell-free method ribosome display (RD) enables expression of such recalcitrant proteins by keeping each nascent polypeptide chain tethered to its ribosome, which can enhance protein folding by virtue of its size and solubility. Moreover, in contrast to an in planta readout of receptor activity such as a hypersensitive response that conflates binding and signaling, RD enables direct probing of the interaction between plant immune receptors and their targets. Here, we demonstrate the utility of this approach using tomato recognition of Trichoderma viride ethylene-inducing xylanase (EIX) as a case study. Leveraging the modular nature of the tomato LeEIX2 and LeEIX1 leucine-rich repeat (LRR) receptors, we applied an entropy-informed algorithm to maximize the information content in our receptor segmentation RD experiments to identify segments implicated in EIX binding. Unexpectedly, two distinct EIX-binding hotspots were discovered on LeEIX2 and both hotspots are shared with decoy LeEIX1, suggesting that their contrasting receptor functions are not due to differential modes of ligand binding. Given that most plant immune receptors are thought to engage targets via their LRR sequences, this approach should be of broad utility in rapidly identifying their binding hotspots.


Asunto(s)
Proteínas de Plantas/química , Proteínas de Plantas/metabolismo , Solanum lycopersicum/metabolismo , Sitios de Unión , Sistema Libre de Células/química , Sistema Libre de Células/metabolismo , Endo-1,4-beta Xilanasas/química , Endo-1,4-beta Xilanasas/genética , Endo-1,4-beta Xilanasas/metabolismo , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Hypocreales/enzimología , Hypocreales/genética , Solanum lycopersicum/química , Solanum lycopersicum/microbiología , Enfermedades de las Plantas/genética , Enfermedades de las Plantas/inmunología , Enfermedades de las Plantas/microbiología , Proteínas de Plantas/genética , Unión Proteica , Pliegue de Proteína , Ribosomas/química , Ribosomas/genética , Ribosomas/metabolismo
16.
Carbohydr Polym ; 277: 118771, 2022 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-34893216

RESUMEN

The enzymatic hydrolysis of barley beta-glucan, konjac glucomannan and carboxymethyl cellulose by a ß-1,4-D-endoglucanase MeCel45A from blue mussel, Mytilus edulis, which belongs to subfamily B of glycoside hydrolase family 45 (GH45), was compared with GH45 members of subfamilies A (Humicola insolens HiCel45A), B (Trichoderma reesei TrCel45A) and C (Phanerochaete chrysosporium PcCel45A). Furthermore, the crystal structure of MeCel45A is reported. Initial rates and hydrolysis yields were determined by reducing sugar assays and product formation was characterized using NMR spectroscopy. The subfamily B and C enzymes exhibited mannanase activity, whereas the subfamily A member was uniquely able to produce monomeric glucose. All enzymes were confirmed to be inverting glycoside hydrolases. MeCel45A appears to be cold adapted by evolution, as it maintained 70% activity on cellohexaose at 4 °C relative to 30 °C, compared to 35% for TrCel45A. Both enzymes produced cellobiose and cellotetraose from cellohexaose, but TrCel45A additionally produced cellotriose.


Asunto(s)
Glicósido Hidrolasas/metabolismo , Mananos/metabolismo , Mytilus edulis/enzimología , beta-Glucanos/metabolismo , Animales , Hongos del Género Humicola/enzimología , Glicósido Hidrolasas/química , Hypocreales/enzimología , Isoenzimas/química , Isoenzimas/metabolismo , Phanerochaete/enzimología
17.
Protein Expr Purif ; 190: 106009, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-34742914

RESUMEN

The enzymatic conversion of lignocellulosic biomass to fermentable sugars is determined by the enzymatic activity of cellulases; consequently, improving enzymatic activity has attracted great interest in the scientific community. Cocktails of commercial cellulase often have low ß-glucosidase content, leading to the accumulation of cellobiose. This accumulation inhibits the activity of the cellulolytic complex and can be used to determine the enzymatic efficiency of commercial cellulase cocktails. Here, a novel codon optimized ß-glucosidase gene (B-glusy) from Trichoderma reesei QM6a was cloned and expressed in three strains of Escherichia coli (E. coli). The synthetic sequence containing an open reading frame (ORF) of 1491 bp was used to encode a polypeptide of 497 amino acid residues. The ß-glucosidase recombinant protein that was expressed (57 kDa of molecular weight) was purified by Ni agarose affinity chromatography and visualized by SDS-PAGE. The recombinant protein was better expressed in E. coli BL21 (DE3), and its enzymatic activity was higher at neutral pH and 30 °C (22.4 U/mg). Subsequently, the ß-glucosidase was immobilized using magnetite nano-support, after which it maintained >65% of its enzymatic activity from pH 6 to 10, and was more stable than the free enzyme above 40 °C. The maximum immobilization yield had enzyme activity of 97.2%. In conclusion, ß-glucosidase is efficiently expressed in the microbial strain E. coli BL21 (DE3) grown in a simplified culture medium.


Asunto(s)
Enzimas Inmovilizadas , Escherichia coli , Proteínas Fúngicas , Expresión Génica , Hypocreales/genética , Nanopartículas de Magnetita/química , beta-Glucosidasa , Estabilidad de Enzimas , Enzimas Inmovilizadas/biosíntesis , Enzimas Inmovilizadas/química , Enzimas Inmovilizadas/genética , Enzimas Inmovilizadas/aislamiento & purificación , Escherichia coli/genética , Escherichia coli/metabolismo , Proteínas Fúngicas/biosíntesis , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Proteínas Fúngicas/aislamiento & purificación , Hypocreales/enzimología , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , beta-Glucosidasa/biosíntesis , beta-Glucosidasa/química , beta-Glucosidasa/genética , beta-Glucosidasa/aislamiento & purificación
18.
J Biol Chem ; 297(5): 101256, 2021 11.
Artículo en Inglés | MEDLINE | ID: mdl-34597668

RESUMEN

Owing to their ability to break glycosidic bonds in recalcitrant crystalline polysaccharides such as cellulose, the catalysis effected by lytic polysaccharide monooxygenases (LPMOs) is of major interest. Kinetics of these reductant-dependent, monocopper enzymes is complicated by the insoluble nature of the cellulose substrate and parallel, enzyme-dependent, and enzyme-independent side reactions between the reductant and oxygen-containing cosubstrates. Here, we provide kinetic characterization of cellulose peroxygenase (oxidative cleavage of glycosidic bonds in cellulose) and reductant peroxidase (oxidation of the reductant) activities of the LPMO TrAA9A of the cellulose-degrading model fungus Trichoderma reesei. The catalytic efficiency [Formula: see text] of the cellulose peroxygenase reaction (kcat = 8.5 s-1, and [Formula: see text] ) was an order of magnitude higher than that of the reductant (ascorbic acid) peroxidase reaction. The turnover of H2O2 in the ascorbic acid peroxidase reaction followed the ping-pong mechanism and led to irreversible inactivation of the enzyme with a probability of 0.0072. Using theoretical analysis, we suggest a relationship between the half-life of LPMO, the values of kinetic parameters, and the concentrations of the reactants.


Asunto(s)
Proteínas Fúngicas/química , Peróxido de Hidrógeno/química , Hypocreales/enzimología , Oxigenasas de Función Mixta/química , Catálisis , Hypocreales/genética , Cinética
19.
ACS Appl Mater Interfaces ; 13(42): 49816-49827, 2021 Oct 27.
Artículo en Inglés | MEDLINE | ID: mdl-34653337

RESUMEN

A novel conductive nanohydrogel hybrid support was prepared by in situ polymerization of polyaniline nanorods on an electrospun cationic hydrogel of poly(ε-caprolactone) and a cationic phosphine oxide macromolecule. Subsequently, the cellulase enzyme was immobilized on the hybrid support. Field-emission scanning electron microscopy and Brunauer-Emmett-Teller analyses confirmed a mesoporous, rod-like structure with a slit-like pore geometry for the immobilized support and exhibiting a high immobilization capacity and reduced diffusion resistance of the substrate. For comparison, the catalytic activity, storage stability, and reusability of the immobilized and free enzymes were evaluated. The results showed that the immobilized enzymes have higher thermal stability without changes in the optimal pH (5.5) and temperature (55 °C) for enzyme activity. A high immobilization efficiency (96%) was observed for the immobilized cellulose catalysts after optimization of parameters such as the pH, temperature, incubation time, and protein concentration. The immobilized enzyme retained almost 90% of its original activity after 4 weeks of storage and 73% of its original activity after the ninth reuse cycle. These results strongly suggest that the prepared hybrid support has the potential to be used as a support for protein immobilization.


Asunto(s)
Compuestos de Anilina/metabolismo , Celulasa/metabolismo , Celulosa/metabolismo , Hidrogeles/metabolismo , Compuestos de Anilina/química , Biocatálisis , Cationes/química , Cationes/metabolismo , Celulasa/química , Celulosa/química , Enzimas Inmovilizadas/química , Enzimas Inmovilizadas/metabolismo , Hidrogeles/química , Concentración de Iones de Hidrógeno , Hypocreales/enzimología , Ensayo de Materiales , Temperatura
20.
Molecules ; 26(19)2021 Oct 04.
Artículo en Inglés | MEDLINE | ID: mdl-34641569

RESUMEN

Fighting resistance to antibiotics and chemotherapeutics has brought bioactive peptides to the fore. Peptaibols are short α-aminoisobutyric acid-containing peptides produced by Trichoderma species. Here, we studied the production of peptaibols by Trichoderma atroviride O1 and evaluated their antibacterial and anticancer activity against drug-sensitive and multidrug-resistant bacterium and cancer cell lines. This was substantiated by an analysis of the activity of the peptaibol synthetase-encoding gene. Atroviridins, 20-residue peptaibols were detected using MALDI-TOF mass spectrometry. Gram-positive bacteria were susceptible to peptaibol-containing extracts of T. atroviride O1. A synergic effect of extract constituents was possible, and the biolo-gical activity of extracts was pronounced in/after the peak of peptaibol synthetase activity. The growth of methicillin-resistant Staphylococcus aureus was reduced to just under 10% compared to the control. The effect of peptaibol-containing extracts was strongly modulated by the lipoteichoic acid and only slightly by the horse blood serum present in the cultivation medium. Peptaibol-containing extracts affected the proliferation of human breast cancer and human ovarian cancer cell lines in a 2D model, including the multidrug-resistant sublines. The peptaibols influenced the size and compactness of the cell lines in a 3D model. Our findings indicate the molecular basis of peptaibol production in T. atroviride O1 and the potential of its peptaibol-containing extracts as antimicrobial/anticancer agents.


Asunto(s)
Farmacorresistencia Bacteriana , Hypocreales/metabolismo , Ligasas/metabolismo , Staphylococcus aureus Resistente a Meticilina/efectos de los fármacos , Neoplasias/tratamiento farmacológico , Peptaiboles/farmacología , Animales , Antibacterianos/farmacología , Antineoplásicos/farmacología , Línea Celular Tumoral , Femenino , Proteínas Fúngicas/metabolismo , Caballos , Humanos , Hypocreales/enzimología , Células MCF-7 , Peptaiboles/análisis , Peptaiboles/metabolismo , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
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