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1.
Viruses ; 11(10)2019 10 16.
Artículo en Inglés | MEDLINE | ID: mdl-31623162

RESUMEN

More than 350 million people worldwide have been persistently infected with the hepatitis B virus (HBV). Chronic HBV infection could advance toward liver cirrhosis and hepatocellular carcinoma. The intervention with prophylactic vaccine and conventional treatment could suppress HBV, but could not completely eradicate it. The major obstacle for investigating curative antiviral drugs are the incompetence of hepatocyte models that should have closely imitated natural human infection. Here, we demonstrated that an immortalized hepatocyte-like cell line (imHC) could accommodate for over 30 days the entire life cycle of HBV prepared from either established cultured cells or clinically-derived fresh isolates. Normally, imHCs had intact interferon signaling with anti-viral action. Infected imHCs responded to treatments with direct-acting antiviral drugs (DAAs) and interferons (IFNs) by diminishing HBV DNA, the covalently closed circular DNA (cccDNA) surface antigen of HBV (HBsAg, aka the Australia antigen) and the hepatitis B viral protein (HBeAg). Notably, we could observe and quantify HBV spreading from infected cells to naïve cells using an imHC co-culture model. In summary, this study constructed a convenient HBV culture model that allows the screening for novel anti-HBV agents with versatile targets, either HBV entry, replication or cccDNA formation. Combinations of agents aiming at different targets should achieve a complete HBV eradication.


Asunto(s)
Línea Celular Transformada/virología , ADN Circular , Virus de la Hepatitis B/fisiología , Hepatocitos/virología , Replicación Viral , ADN Viral/genética , Hepatitis B/virología , Antígenos de Superficie de la Hepatitis B/análisis , Antígenos e de la Hepatitis B/análisis , Virus de la Hepatitis B/genética , Humanos , Estadios del Ciclo de Vida
2.
Clinics (Sao Paulo) ; 73(suppl 1): e539s, 2018 09 06.
Artículo en Inglés | MEDLINE | ID: mdl-30208168

RESUMEN

Infection with high oncogenic risk human papillomavirus types is the etiological factor of cervical cancer and a major cause of other epithelial malignancies, including vulvar, vaginal, anal, penile and head and neck carcinomas. These agents affect epithelial homeostasis through the expression of specific proteins that deregulate important cellular signaling pathways to achieve efficient viral replication. Among the major targets of viral proteins are components of the DNA damage detection and repair machinery. The activation of many of these cellular factors is critical to process viral genome replication intermediates and, consequently, to sustain faithful viral progeny production. In addition to the important role of cellular DNA repair machinery in the infective human papillomavirus cycle, alterations in the expression and activity of many of its components are observed in human papillomavirus-related tumors. Several studies from different laboratories have reported the impact of the expression of human papillomavirus oncogenes, mainly E6 and E7, on proteins in almost all the main cellular DNA repair mechanisms. This has direct consequences on cellular transformation since it causes the accumulation of point mutations, insertions and deletions of short nucleotide stretches, as well as numerical and structural chromosomal alterations characteristic of tumor cells. On the other hand, it is clear that human papillomavirus-transformed cells depend on the preservation of a basal cellular DNA repair activity level to maintain tumor cell viability. In this review, we summarize the data concerning the effect of human papillomavirus infection on DNA repair mechanisms. In addition, we discuss the potential of exploiting human papillomavirus-transformed cell dependency on DNA repair pathways as effective antitumoral therapies.


Asunto(s)
Reparación del ADN , Inestabilidad Genómica/genética , Neoplasias/virología , Papillomaviridae/genética , Infecciones por Papillomavirus/virología , Línea Celular Transformada/virología , Supervivencia Celular/genética , Humanos , Neoplasias/terapia , Papillomaviridae/fisiología , Replicación Viral
3.
J Gen Virol ; 99(5): 631-644, 2018 05.
Artículo en Inglés | MEDLINE | ID: mdl-29624161

RESUMEN

We created the first human papillomavirus (HPV)-16-immortalized anal epithelial cell line, known as AKC2 cells to establish an in vitro model of HPV-16-induced anal carcinogenesis. Consistent with detection of E6, E7 and E5 expression in anal cancer biopsies, AKC2 cells expressed high levels of all three HPV oncogenes. Also, similar to findings in anal cancer biopsies, epidermal growth factor receptor (EGFR) was overexpressed in AKC2 cells. AKC2 cells exhibited a poorly differentiated and invasive phenotype in three-dimensional raft culture and inhibition of EGFR function abrogated AKC2 invasion. Reducing E5 expression using E5-targeted siRNAs in AKC2 cells led to knockdown of E5 expression, but also HPV-16 E2, E6 and E7 expression. AKC2 cells treated with E5-targeted siRNA had reduced levels of total and phosphorylated EGFR, and reduced invasion. Rescue of E6/E7 expression with simultaneous E5 knockdown confirmed that E5 plays a key role in EGFR overexpression and EGFR-induced invasion.


Asunto(s)
Neoplasias del Ano/virología , Células Epiteliales/virología , Receptores ErbB/genética , Papillomavirus Humano 16/genética , Proteínas Oncogénicas Virales/genética , Carcinogénesis , Diferenciación Celular , Línea Celular Transformada/virología , Receptores ErbB/antagonistas & inhibidores , Técnicas de Silenciamiento del Gen , Humanos , Modelos Biológicos , Proteínas E7 de Papillomavirus/genética , ARN Interferente Pequeño/genética , Proteínas Represoras/genética
4.
Clinics ; 73(supl.1): e539s, 2018. graf
Artículo en Inglés | LILACS | ID: biblio-952838

RESUMEN

Infection with high oncogenic risk human papillomavirus types is the etiological factor of cervical cancer and a major cause of other epithelial malignancies, including vulvar, vaginal, anal, penile and head and neck carcinomas. These agents affect epithelial homeostasis through the expression of specific proteins that deregulate important cellular signaling pathways to achieve efficient viral replication. Among the major targets of viral proteins are components of the DNA damage detection and repair machinery. The activation of many of these cellular factors is critical to process viral genome replication intermediates and, consequently, to sustain faithful viral progeny production. In addition to the important role of cellular DNA repair machinery in the infective human papillomavirus cycle, alterations in the expression and activity of many of its components are observed in human papillomavirus-related tumors. Several studies from different laboratories have reported the impact of the expression of human papillomavirus oncogenes, mainly E6 and E7, on proteins in almost all the main cellular DNA repair mechanisms. This has direct consequences on cellular transformation since it causes the accumulation of point mutations, insertions and deletions of short nucleotide stretches, as well as numerical and structural chromosomal alterations characteristic of tumor cells. On the other hand, it is clear that human papillomavirus-transformed cells depend on the preservation of a basal cellular DNA repair activity level to maintain tumor cell viability. In this review, we summarize the data concerning the effect of human papillomavirus infection on DNA repair mechanisms. In addition, we discuss the potential of exploiting human papillomavirus-transformed cell dependency on DNA repair pathways as effective antitumoral therapies.


Asunto(s)
Humanos , Papillomaviridae/genética , Infecciones por Papillomavirus/virología , Reparación del ADN , Neoplasias/virología , Papillomaviridae/fisiología , Replicación Viral , Línea Celular Transformada/virología , Supervivencia Celular/genética , Inestabilidad Genómica/genética , Neoplasias/terapia
5.
Pharmacogenomics ; 16(3): 273-85, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25712190

RESUMEN

In vitro human cell line models have been widely used for cancer pharmacogenomic studies to predict clinical response, to help generate pharmacogenomic hypothesis for further testing, and to help identify novel mechanisms associated with variation in drug response. Among cell line model systems, immortalized cell lines such as Epstein-Barr virus (EBV)-transformed lymphoblastoid cell lines (LCLs) have been used most often to test the effect of germline genetic variation on drug efficacy and toxicity. Another model, especially in cancer research, uses cancer cell lines such as the NCI-60 panel. These models have been used mainly to determine the effect of somatic alterations on response to anticancer therapy. Even though these cell line model systems are very useful for initial screening, results from integrated analyses of multiple omics data and drug response phenotypes using cell line model systems still need to be confirmed by functional validation and mechanistic studies, as well as validation studies using clinical samples. Future models might include the use of patient-specific inducible pluripotent stem cells and the incorporation of 3D culture which could further optimize in vitro cell line models to improve their predictive validity.


Asunto(s)
Antineoplásicos/uso terapéutico , Línea Celular Tumoral/efectos de los fármacos , Neoplasias de la Mama/tratamiento farmacológico , Neoplasias de la Mama/genética , Línea Celular Transformada/efectos de los fármacos , Línea Celular Transformada/virología , Neoplasias Colorrectales/tratamiento farmacológico , Neoplasias Colorrectales/genética , Ensayos de Selección de Medicamentos Antitumorales/métodos , Femenino , Marcadores Genéticos , Variación Genética , Proyecto Mapa de Haplotipos , Herpesvirus Humano 4 , Humanos , Técnicas In Vitro , Células Madre Pluripotentes Inducidas/efectos de los fármacos , Modelos Biológicos , Polimorfismo de Nucleótido Simple , Microambiente Tumoral
6.
Biochem Biophys Res Commun ; 452(3): 315-21, 2014 Sep 26.
Artículo en Inglés | MEDLINE | ID: mdl-25150444

RESUMEN

Hepatitis B virus (HBV) covalently closed circular DNA (cccDNA) plays a central role in chronic HBV infection. However, analysis of the molecular mechanism of cccDNA formation is difficult because of the low efficiency in tissue cultured cells. In this study, we developed a more efficient cccDNA expression cell, Hep38.7-Tet, by subcloning from a tetracycline inducible HBV expression cell, HepAD38. Higher levels of cccDNA were produced in Hep38.7-Tet cells compared to HepAD38 cells. In Hep38.7-Tet cells, the cccDNA was detectable at six days after HBV induction. HBV e antigen (HBeAg) secretion was dependent upon cccDNA production. We screened chemical compounds using Hep38.7-Tet cells and HBeAg secretion as a marker. Most of the hit compounds have already been reported as anti-HBV compounds. These data suggested that Hep38.7-Tet cells will be powerful tools for analysis of the molecular mechanism of cccDNA formation/maintenance and development of novel therapeutic agents to control HBV infection.


Asunto(s)
Línea Celular Transformada/efectos de los fármacos , ADN Circular/genética , ADN Viral/genética , Virus de la Hepatitis B/efectos de los fármacos , Hepatocitos/efectos de los fármacos , Antivirales/farmacología , Línea Celular Transformada/metabolismo , Línea Celular Transformada/virología , ADN Circular/metabolismo , ADN Viral/metabolismo , Efecto Fundador , Expresión Génica , Antígenos e de la Hepatitis B/biosíntesis , Antígenos e de la Hepatitis B/genética , Virus de la Hepatitis B/genética , Virus de la Hepatitis B/metabolismo , Hepatocitos/metabolismo , Hepatocitos/virología , Ensayos Analíticos de Alto Rendimiento , Humanos , Inhibidores de la Síntesis de la Proteína/farmacología , Bibliotecas de Moléculas Pequeñas/farmacología , Tetraciclina/farmacología , Replicación Viral/efectos de los fármacos
7.
J Neurosci ; 33(24): 9998-10010, 2013 Jun 12.
Artículo en Inglés | MEDLINE | ID: mdl-23761895

RESUMEN

Human immunodeficiency virus (HIV)-associated neurocognitive disorders (HAND) is a significant source of disability in the HIV-infected population. Even with stringent adherence to anti-retroviral therapy, >50% of patients living with HIV-1 will develop HAND (Heaton et al., 2010). Because suppression of viral replication alone is not enough to stop HAND progression, there is a need for an adjunctive neuroprotective therapy in this population. To this end, we have developed a small-molecule brain-penetrant inhibitor with activity against mixed-lineage kinase 3 (MLK3), named URMC-099. MLK3 activation is associated with many of the pathologic hallmarks of HAND (Bodner et al., 2002, 2004; Sui et al., 2006) and therefore represents a prime target for adjunctive therapy based on small-molecule kinase inhibition. Here we demonstrate the anti-inflammatory and neuroprotective effects of URMC-099 in multiple murine and rodent models of HAND. In vitro, URMC-099 treatment reduced inflammatory cytokine production by HIV-1 Tat-exposed microglia and prevented destruction and phagocytosis of cultured neuronal axons by these cells. In vivo, URMC-099 treatment reduced inflammatory cytokine production, protected neuronal architecture, and altered the morphologic and ultrastructural response of microglia to HIV-1 Tat exposure. In conclusion, these data provide compelling in vitro and in vivo evidence to investigate the utility of URMC-099 in other models of HAND with the goal of advancement to an adjunctive therapeutic agent.


Asunto(s)
Infecciones por VIH/complicaciones , Infecciones por VIH/tratamiento farmacológico , Inflamación/prevención & control , Quinasas Quinasa Quinasa PAM/antagonistas & inhibidores , Fármacos Neuroprotectores/uso terapéutico , Animales , Trasplante de Médula Ósea , Receptor 1 de Quimiocinas CX3C , Línea Celular Transformada/efectos de los fármacos , Línea Celular Transformada/virología , Células Cultivadas , Citocinas , Modelos Animales de Enfermedad , Embrión de Mamíferos , Productos del Gen tat/inmunología , Proteínas Fluorescentes Verdes/genética , Proteínas Fluorescentes Verdes/metabolismo , Infecciones por VIH/virología , VIH-1/fisiología , Hipocampo/patología , Humanos , Inflamación/genética , Inflamación/patología , Inflamación/virología , Ratones , Ratones Transgénicos , Microscopía Inmunoelectrónica , Fagocitosis/efectos de los fármacos , Fagocitosis/genética , Fosforilación/efectos de los fármacos , Piridinas/farmacología , Piridinas/uso terapéutico , Pirroles/farmacología , Pirroles/uso terapéutico , Ratas , Receptores de Quimiocina/genética , Receptores de Quimiocina/metabolismo , Transducción de Señal/efectos de los fármacos , Transducción de Señal/genética , Estadísticas no Paramétricas , Factores de Tiempo , Transfección , Productos del Gen tat del Virus de la Inmunodeficiencia Humana , Proteina Quinasa Quinasa Quinasa 11 Activada por Mitógeno
8.
Oncol Rep ; 28(4): 1512-8, 2012 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-22859062

RESUMEN

Fucoxanthin (FX) is a natural carotenoid with reported antitumorigenic activity. This study explored the effects of FX and its deacetylated product, fucoxanthinol (FXOH), on B-cell malignancies, including Burkitt's lymphoma, Hodgkin's lymphoma and Epstein-Barr virus-immortalized B cells. Both FX and FXOH reduced the viability of these malignant B cells in a dose-dependent manner accompanied by the induction of cell cycle arrest during G1 phase and caspase-dependent apoptosis. FXOH was approximately twice more potent than FX in these activities. In contrast, normal peripheral blood mononuclear cells were resistant to FX and FXOH. Strong and constitutive activation of nuclear factor-κB (NF-κB) is a common characteristic of many B-cell malignancies, and FXOH suppressed constitutive NF-κB activity. NF-κB inhibition was accompanied by downregulation of NF-κB-dependent anti-apoptotic and cell cycle regulator gene products, including Bcl-2, cIAP-2, XIAP, cyclin D1 and cyclin D2. The results indicated that FX and FXOH are potentially useful therapeutic agents in B-cell malignancies characterized by aberrant regulation of NF-κB.


Asunto(s)
Antineoplásicos Fitogénicos/farmacología , Linfoma de Burkitt/tratamiento farmacológico , Enfermedad de Hodgkin/tratamiento farmacológico , Xantófilas/farmacología , beta Caroteno/análogos & derivados , Apoptosis/efectos de los fármacos , Linfocitos B/efectos de los fármacos , Linfocitos B/patología , Linfocitos B/virología , Linfoma de Burkitt/patología , Caspasas/metabolismo , Línea Celular Transformada/virología , Ciclina D1/metabolismo , Ciclina D2/metabolismo , Relación Dosis-Respuesta a Droga , Ensayos de Selección de Medicamentos Antitumorales , Herpesvirus Humano 4/metabolismo , Enfermedad de Hodgkin/patología , Humanos , FN-kappa B/antagonistas & inhibidores , FN-kappa B/metabolismo , Proteína Inhibidora de la Apoptosis Ligada a X/metabolismo , beta Caroteno/farmacología
9.
RNA ; 18(8): 1435-45, 2012 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-22736799

RESUMEN

The key postulate that one gene encodes one protein has been overhauled with the discovery that one gene can generate multiple RNA transcripts through alternative mRNA processing. In this study, we describe SplicerEX, a novel and uniquely motivated algorithm designed for experimental biologists that (1) detects widespread changes in mRNA isoforms from both conventional and splice sensitive microarray data, (2) automatically categorizes mechanistic changes in mRNA processing, and (3) mitigates known technological artifacts of exon array-based detection of alternative splicing resulting from 5' and 3' signal attenuation, background detection limits, and saturation of probe set signal intensity. In this study, we used SplicerEX to compare conventional and exon-based Affymetrix microarray data in a model of EBV transformation of primary human B cells. We demonstrated superior detection of 3'-located changes in mRNA processing by the Affymetrix U133 GeneChip relative to the Human Exon Array. SplicerEX-identified exon-level changes in the EBV infection model were confirmed by RT-PCR and revealed a novel set of EBV-regulated mRNA isoform changes in caspases 6, 7, and 8. Finally, SplicerEX as compared with MiDAS analysis of publicly available microarray data provided more efficiently categorized mRNA isoform changes with a significantly higher proportion of hits supported by previously annotated alternative processing events. Therefore, SplicerEX provides an important tool for the biologist interested in studying changes in mRNA isoform usage from conventional or splice-sensitive microarray platforms, especially considering the expansive amount of archival microarray data generated over the past decade. SplicerEX is freely available upon request.


Asunto(s)
Empalme Alternativo/genética , Infecciones por Virus de Epstein-Barr/genética , Exones/genética , Perfilación de la Expresión Génica , Análisis de Secuencia por Matrices de Oligonucleótidos , ARN Mensajero/análisis , ARN Mensajero/genética , Algoritmos , Automatización , Linfocitos B/patología , Linfocitos B/virología , Biomarcadores/análisis , Línea Celular Transformada/patología , Línea Celular Transformada/virología , Células Cultivadas , Infecciones por Virus de Epstein-Barr/virología , Herpesvirus Humano 4/genética , Humanos , Isoformas de ARN , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa
10.
J Clin Invest ; 122(4): 1487-502, 2012 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-22406538

RESUMEN

Epstein-Barr virus (EBV) persistently infects more than 90% of the human population and is etiologically linked to several B cell malignancies, including Burkitt lymphoma (BL), Hodgkin lymphoma (HL), and diffuse large B cell lymphoma (DLBCL). Despite its growth transforming properties, most immune-competent individuals control EBV infection throughout their lives. EBV encodes various oncogenes, and of the 6 latency-associated EBV-encoded nuclear antigens, only EBNA3B is completely dispensable for B cell transformation in vitro. Here, we report that infection with EBV lacking EBNA3B leads to aggressive, immune-evading monomorphic DLBCL-like tumors in NOD/SCID/γc-/- mice with reconstituted human immune system components. Infection with EBNA3B-knockout EBV (EBNA3BKO) induced expansion of EBV-specific T cells that failed to infiltrate the tumors. EBNA3BKO-infected B cells expanded more rapidly and secreted less T cell-chemoattractant CXCL10, reducing T cell recruitment in vitro and T cell-mediated killing in vivo. B cell lines from 2 EBV-positive human lymphomas encoding truncated EBNA3B exhibited gene expression profiles and phenotypic characteristics similar to those of tumor-derived lines from the humanized mice, including reduced CXCL10 secretion. Screening EBV-positive DLBCL, HL, and BL human samples identified additional EBNA3B mutations. Thus, EBNA3B is a virus-encoded tumor suppressor whose inactivation promotes immune evasion and virus-driven lymphomagenesis.


Asunto(s)
Transformación Celular Viral/genética , Infecciones por Virus de Epstein-Barr/virología , Antígenos Nucleares del Virus de Epstein-Barr/fisiología , Genes Supresores de Tumor , Genes Virales , Herpesvirus Humano 4/fisiología , Linfoma de Células B/virología , Trastornos Linfoproliferativos/virología , Complicaciones Posoperatorias/virología , Proteínas Supresoras de Tumor/fisiología , Infecciones Tumorales por Virus/virología , Animales , Línea Celular Transformada/trasplante , Línea Celular Transformada/virología , Quimiocina CXCL10/biosíntesis , Quimiocina CXCL10/deficiencia , Quimiocina CXCL10/genética , Quimera , Análisis Mutacional de ADN , Infecciones por Virus de Epstein-Barr/genética , Antígenos Nucleares del Virus de Epstein-Barr/genética , Eliminación de Gen , Trasplante de Células Madre Hematopoyéticas , Herpesvirus Humano 4/genética , Herpesvirus Humano 4/patogenicidad , Humanos , Interferón gamma/deficiencia , Interferón gamma/genética , Linfoma de Células B/genética , Trastornos Linfoproliferativos/genética , Ratones , Ratones Endogámicos NOD , Ratones Noqueados , Ratones SCID , Mutación , Complicaciones Posoperatorias/genética , Trasplante Heterólogo , Proteínas Supresoras de Tumor/genética , Infecciones Tumorales por Virus/genética
11.
Virol J ; 9: 77, 2012 Mar 30.
Artículo en Inglés | MEDLINE | ID: mdl-22458412

RESUMEN

BACKGROUND: Epstain-Barr virus (EBV) can transform human B lymphocytes making them immortalized and inducing tumorigenic ability in vitro, but the molecular mechanisms remain unclear. The aim of the present study is to detect and analyze differentially expressed genes in two types of host cells, normal human lymphocytes and coupled EBV-transformed lymphoblasts in vitro using gene chips, and to screen the key regulatory genes of lymphocyte transformation induced by EB virus. METHODS: Fresh peripheral blood samples from seven healthy donors were collected. EBV was used to transform lymphocytes in vitro. Total RNA was extracted from 7 cases of the normal lymphocytes and transformed lymphoblasts respectively, marked with dihydroxyfluorane after reverse transcription, then hybridized with 4 × 44 K Agilent human whole genome microarray. LIMMA, String, Cytoscape and other softwares were used to screen and analyze differentially expressed genes. Real-time PCR was applied to verify the result of gene expression microarrays. RESULTS: There were 1745 differentially expressed genes that had been screened, including 917 up-regulated genes and 828 down-regulated genes. According to the results of Generank, String and Cytoscape analyses, 38 genes may be key controlled genes related to EBV-transformed lymphocytes, including 22 up-regulated genes(PLK1, E2F1, AURKB, CDK2, PLCG2, CD80, PIK3R3, CDC20, CDC6, AURKA, CENPA, BUB1B, NUP37, MAD2L1, BIRC5, CDC25A, CCNB1, RPA3, HJURP, KIF2C, CDK1, CDCA8) and 16 down-regulated genes(FYN, CD3D, CD4, CD3G, ZAP70, FOS, HCK, CD247, PRKCQ, ITK, LCP2, CXCL1, CD8A, ITGB5, VAV3, CXCR4), which primarily control biological processes such as cell cycle, mitosis, cytokine-cytokine pathway, immunity response and so on. CONCLUSIONS: Human lymphocyte transformation induced by EB virus is a complicated process, involving multiple-genes and -pathways in virus-host interactions. Global gene expression profile analysis showed that EBV may transform human B lymphocytes by promoting cell cycle and mitosis, inhibiting cell apoptosis, hindering host immune function and secretion of cytokines.


Asunto(s)
Línea Celular Transformada/metabolismo , Transformación Celular Viral , Perfilación de la Expresión Génica , Regulación de la Expresión Génica , Herpesvirus Humano 4/fisiología , Linfocitos , Línea Celular Transformada/virología , Perfilación de la Expresión Génica/métodos , Humanos , Activación de Linfocitos , Linfocitos/metabolismo , Linfocitos/virología , Análisis de Secuencia por Matrices de Oligonucleótidos , Proteínas/genética , Proteínas/metabolismo
12.
J Virol ; 86(6): 2970-7, 2012 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-22238296

RESUMEN

Many cell lines commonly used for biological studies have been found to harbor exogenous agents such as the human tumor viruses Epstein-Barr virus (EBV) and human papillomavirus. Nevertheless, broad-based, unbiased approaches to globally assess the presence of ectopic organisms within cell model systems have not previously been available. We reasoned that high-throughput sequencing should provide unparalleled insights into the microbiomes of tissue culture cell systems. Here we have used our RNA-seq analysis pipeline, PARSES (Pipeline for Analysis of RNA-Seq Exogenous Sequences), to investigate the presence of ectopic organisms within two EBV-positive B-cell lines commonly used by EBV researchers. Sequencing data sets from both the Akata and JY B-cell lines were found to contain reads for EBV, and the JY data set was found to also contain reads from the murine leukemia virus (MuLV). Further investigation revealed that MuLV transcription in JY cells is highly active. We also identified a number of MuLV alternative splicing events, and we uncovered evidence of APOBEC3G (apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like 3G)-dependent DNA editing. Finally, reverse transcription-PCR analysis showed the presence of MuLV in three other human B-cell lines (DG75, Ramos, and P3HR1 Cl.13) commonly used by investigators in the Epstein-Barr virus field. We believe that a thorough examination of tissue culture microbiomes using RNA-seq/PARSES-like approaches is critical for the appropriate utilization of these systems in biological studies.


Asunto(s)
Linfocitos B/virología , Línea Celular Transformada/virología , Biología Computacional/métodos , Herpesvirus Humano 4/fisiología , Virus de la Leucemia Murina/aislamiento & purificación , ARN Viral/genética , Herpesvirus Humano 4/genética , Herpesvirus Humano 4/aislamiento & purificación , Humanos , Virus de la Leucemia Murina/genética , Datos de Secuencia Molecular
13.
DNA Cell Biol ; 30(12): 975-85, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-21649506

RESUMEN

DNA vaccines are known to be lacking in immunogenicity in humans. Presently, electroporation (EP) is thought to overcome this limitation. Here, we investigate whether human papillomavirus 16 E7 DNA vaccines delivered by EP might elicit potent antitumor activity in animal cervical cancer models, with a focus on the underlying mechanism(s). Intramuscular (IM)-EP delivery of E7 DNA vaccines induced more potent antitumor therapeutic and antimetastatic activity compared with IM delivery. Moreover, the tumor-controlled animals by IM-EP possessed long-term memory responses to parental tumor cells. This improved antitumor effect was concomitant with augmented Ag-specific CTL activities. IM-EP also induced IgG and Th-cell responses higher than IM delivery. Finally, IM-EP resulted in more antigen production in and more attraction of immune cells into the site of DNA injection, suggesting that these biological and immunological changes made by IM-EP might be responsible for enhanced CTL activities and antitumor resistance. Thus, this study shows that IM-EP can induce more potent antitumor activity by augmenting CTL responses possibly through more antigen production in and more attraction of immune cells into the muscle sites. This study also suggests that IM-EP of E7 DNA vaccines might be a potential approach toward treating patients with cervical cancer.


Asunto(s)
Vacunas contra el Cáncer/uso terapéutico , Papillomavirus Humano 16/inmunología , Proteínas E7 de Papillomavirus/inmunología , Vacunas contra Papillomavirus/uso terapéutico , Animales , Vacunas contra el Cáncer/administración & dosificación , Línea Celular Transformada/trasplante , Línea Celular Transformada/virología , Modelos Animales de Enfermedad , Ensayos de Selección de Medicamentos Antitumorales , Electroporación , Células Epiteliales/trasplante , Células Epiteliales/virología , Femenino , Humanos , Esquemas de Inmunización , Inyecciones Intramusculares , Interferón gamma/análisis , Pulmón/citología , Neoplasias Pulmonares/secundario , Neoplasias Pulmonares/terapia , Ratones , Ratones Endogámicos C57BL , Neoplasias Experimentales/inmunología , Neoplasias Experimentales/secundario , Neoplasias Experimentales/terapia , Vacunas contra Papillomavirus/administración & dosificación , Tejido Subcutáneo , Neoplasias del Cuello Uterino , Vacunas de ADN/administración & dosificación , Vacunas de ADN/uso terapéutico
14.
J Lipid Res ; 51(12): 3542-7, 2010 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-20871013

RESUMEN

Acid ceramidase (aCDase) is one of several enzymes responsible for ceramide degradation within mammalian cells. As such, aCDase regulates the intracellular levels of the bioactive lipid ceramide. An inherited deficiency of aCDase activity results in Farber disease (FD), also called lipogranulomatosis, which is characterized by ceramide accumulation in the tissues of patients. Diagnosis of FD is confirmed by demonstration of a deficient aCDase activity and the subsequent storage of ceramide. Existing methods include extremely complex assays, many of them using radiolabeled compounds. Therefore, the aCDase assay and the in vitro enzymatic diagnosis of FD are still performed in only a very limited number of specialized laboratories. Here, the new fluorogenic substrate Rbm14-12 was synthesized and characterized as a new tool to determine aCDase activity. The resulting optimized assay was performed in 96-well plates, and different fibroblast and lymphoid cell lines derived from FD patients and controls were tested to measure aCDase activity. As a result, the activity in cells of FD patients was found to be very low or even null. This new fluorogenic method offers a very easy and rapid way for specific and accurate determination of aCDase activity and, consequently, for diagnosis of FD.


Asunto(s)
Ceramidasa Ácida/análisis , Lipogranulomatosis de Farber/diagnóstico , Espectrometría de Fluorescencia/métodos , Ceramidasa Ácida/metabolismo , Animales , Línea Celular , Línea Celular Transformada/citología , Línea Celular Transformada/metabolismo , Línea Celular Transformada/virología , Infecciones por Virus de Epstein-Barr/metabolismo , Infecciones por Virus de Epstein-Barr/patología , Lipogranulomatosis de Farber/metabolismo , Fibroblastos/citología , Fibroblastos/metabolismo , Colorantes Fluorescentes/química , Tejido Linfoide/citología , Tejido Linfoide/metabolismo , Tejido Linfoide/virología , Piel/citología , Piel/metabolismo
15.
Oral Oncol ; 45(12): e239-44, 2009 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-19833545

RESUMEN

Ameloblastoma (AM) is recognized as a benign tumour but locally invasive with a high risk of recurrence. In vitro model systems for studying AM are limited due to the fact that AM cells grow poorly and begin to senesce early. Japanese researchers have reported the construction of an AM cell line, AM-1, by exposing cells to human papillomavirus 16 (HPV16) but retaining the potential of transformation. In this study, we used a retroviral infection method to over-express the human telomerase reverse transcriptase (hTERT) gene to acquire immortality of hTERT(+)-AM cells. Furthermore, it was revealed both by reverse transcriptase-polymerase chain reaction (RT-PCR) and Western blot that the pathway of immortalization was loss of p16, not p53 or p21. Also, there was no evidence indicating that the hTERT(+)-AM cells underwent malignant transformation by the nude mouse tumorigenicity assay. Taken together, this hTERT-immortalized cell line may be a potentially valuable and reliable cell model for further study of the invasive properties of AM in vitro.


Asunto(s)
Ameloblastoma/patología , Neoplasias Maxilomandibulares/patología , Proteínas de Neoplasias/metabolismo , Telomerasa/metabolismo , Ameloblastoma/enzimología , Ameloblastoma/genética , Western Blotting , Técnicas de Cultivo de Célula , Línea Celular Transformada/virología , Línea Celular Tumoral , Proliferación Celular , Transformación Celular Viral , Activación Enzimática , Epigénesis Genética , Papillomavirus Humano 16 , Humanos , Neoplasias Maxilomandibulares/enzimología , Neoplasias Maxilomandibulares/genética , Masculino , Persona de Mediana Edad , Proteínas de Neoplasias/genética , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Telomerasa/genética , Transfección/métodos
16.
J Virol Methods ; 142(1-2): 159-68, 2007 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-17337070

RESUMEN

HTLV-1 and HTLV-2 are highly related delta-retroviruses that infect and transform T-lymphocytes, but have distinct pathogenic properties. HTLV replication and survival requires the expression of multiple gene products from an unspliced and a series of highly related alternatively spliced mRNA species. To date, the comparative levels of all known HTLV-1 and HTLV-2 viral mRNAs in different transformed cell lines and at different stages of virus infection have not been assessed. In this study, we compiled a series of oligonucleotide primer pairs and probes to quantify both HTLV-1 and HTLV-2 mRNA species using real-time RT-PCR. The optimized reaction for detection of each mRNA had amplification efficiency greater than 90% with a linear range spanning 25-2.5 x 10(7) copies. The R(2)'s of all standard curves were greater than 0.97. Quantitation of HTLV mRNAs between different cell lines showed variability (gag/pol>or=tax/rex>env>or=accessory proteins), but the overall levels of each mRNA relative to each other within a cell line were similar. These results provide a method to quantify all specific mRNAs from both HTLV-1 and HTLV-2, which can be used to evaluate further viral gene expression and correlate transcript levels to key stages of the virus life cycle and ultimately, pathogenesis.


Asunto(s)
Virus Linfotrópico T Tipo 1 Humano/metabolismo , Virus Linfotrópico T Tipo 2 Humano/metabolismo , ARN Mensajero/metabolismo , ARN Viral/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa/métodos , Linfocitos B/virología , Línea Celular Transformada/virología , Cartilla de ADN , Virus Linfotrópico T Tipo 1 Humano/genética , Virus Linfotrópico T Tipo 2 Humano/genética , Humanos , ARN Mensajero/análisis , ARN Mensajero/genética , ARN Viral/análisis , ARN Viral/genética , Linfocitos T/virología , Proteínas Virales/genética , Proteínas Virales/metabolismo
17.
Int J Cancer ; 120(7): 1591-7, 2007 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-17205512

RESUMEN

Adult T-cell leukemia (ATL) is a highly aggressive mature CD4+ T-cell malignancy that is etiologically associated with human T-lymphotropic virus Type 1 (HTLV-1). ATL is characterized by frequent infiltration of lymph nodes, spleen, liver, skin and gut. Previously, we and others have shown that the majority of ATL cases are strongly positive for CCR4, which may explain the frequent skin invasion of ATL. Here, we examined whether ATL cells express CCR9, which is involved in T-cell homing to the gastrointestinal tract. Human T cell lines carrying HTLV-1 consistently expressed CCR9 together with the HTLV-1-encoded transcriptional activator Tax. Although ATL cells freshly isolated from peripheral blood hardly expressed CCR9, ATL cells cultured for 1 day consistently expressed CCR9 in parallel with the upregulation of Tax. Induction of Tax by Cd2+ in JPX-9, a subline of Jurkat human T cell line carrying Tax under the control of metallothionein promoter, led to upregulation of CCR9. A luciferase reporter gene under the control of the CCR9 promoter was expressed by cotransfection of an expression vector for Tax or in Cd2+-treated JPX-9 cells. Furthermore, immunohistochemical staining demonstrated that ATL cells infiltrating gastrointestinal tract were frequently positive for CCR9. Collectively, CCR9 is inducible in ATL cells expressing Tax and may play a role in the gastrointestinal involvement of ATL.


Asunto(s)
Neoplasias Gastrointestinales/metabolismo , Regulación de la Expresión Génica , Productos del Gen tax/metabolismo , Leucemia-Linfoma de Células T del Adulto/metabolismo , Receptores de Quimiocina/metabolismo , Linfocitos T/metabolismo , Adulto , Anciano , Anciano de 80 o más Años , Línea Celular Transformada/metabolismo , Línea Celular Transformada/patología , Línea Celular Transformada/virología , Femenino , Neoplasias Gastrointestinales/patología , Productos del Gen tax/genética , Virus Linfotrópico T Tipo 1 Humano/genética , Humanos , Leucemia-Linfoma de Células T del Adulto/patología , Luciferasas/metabolismo , Masculino , Persona de Mediana Edad , Regiones Promotoras Genéticas/genética , Receptores CCR , Receptores CCR4 , Receptores de Quimiocina/genética , Linfocitos T/patología , Linfocitos T/virología , Transcripción Genética , Células Tumorales Cultivadas/metabolismo , Células Tumorales Cultivadas/patología , Células Tumorales Cultivadas/virología
18.
J Virol Methods ; 139(2): 132-42, 2007 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17049626

RESUMEN

Reovirus has been shown to lyse most transformed cells while establishing a persistent or abortive infection in non-transformed cells. Developing methods to identify the reovirus genes associated with oncolysis is an important step toward understanding the mechanisms involved. This report is the first to develop and apply the use of monoreassortants and reverse genetics to identify an individual reovirus gene associated with reovirus oncolysis. Infection with reovirus serotypes 1/Lang, 2/Jones or 3/Dearing of cells transformed with a normal copy of c-Ha-RAS (N1 cells) or with a normal copy of c-Myc (Myc-3 cells), produces large amounts of progeny virus of all three serotypes and results in lysis of both these cell lines. Infection of cells transformed with a mutant c-Ha-RAS gene (T1 cells) with either serotype 1/Lang and 2/Jones results in the production of large amounts of virus and lysis of the cells. In sharp contrast, serotype 3/Dearing virus infection of these cells produced small amounts of virus and resulted in limited lysis of these cells. Using monoreassortants and reverse genetics we exploited this phenotypic difference between the three serotypes to identify a single reovirus gene linked to the preferential lysis of the T1 cells, the S4 gene.


Asunto(s)
Técnicas Genéticas , Virus Reordenados/genética , Reoviridae/metabolismo , Proteínas ras/genética , Línea Celular Transformada/virología , Reoviridae/genética , Reoviridae/fisiología , Células Tumorales Cultivadas , Proteínas ras/fisiología
19.
Cell Prolif ; 39(6): 457-69, 2006 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-17109631

RESUMEN

Infection of freshly isolated and cryopreserved lymphocytes with Epstein-Barr virus (EBV) leads to the establishment of human B lymphoblastoid cell lines (LCLs). Techniques for optimal infection of the lymphocytes are vital for the establishment of a human biobank. The present study found that more than half (58-86%) of such established LCLs had transport times of less than 48 h, cell densities exceeding 10(6) cells/ml and cell viabilities greater than 90%. After EBV infection, 3306 freshly isolated lymphocytes required 30.0 +/- 0.1 days to become LCLs. Conversely, 1210 cryopreserved lymphocytes required 36.2 +/- 0.4 days. Cell density and viability of the culture affected transformation time in freshly isolated lymphocytes. On the other hand, blood transport time, cryopreservation time and initial cell viability were major factors in cryopreserved specimens. These results contribute to general information concerning the establishment of a human biobank for EBV infected cells.


Asunto(s)
Linfocitos B/citología , Linfocitos B/virología , Transformación Celular Viral , Herpesvirus Humano 4 , Animales , Callithrix , Recuento de Células , Línea Celular Transformada/citología , Línea Celular Transformada/virología , Separación Celular , Supervivencia Celular , Criopreservación , Humanos
20.
Int J Oral Maxillofac Surg ; 35(7): 653-7, 2006 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-16513324

RESUMEN

E6 and E7 oncoproteins from high-risk human papillomavirus (HPV) can transform cells in tissue culture and induce tumors in vivo by abrogating the cell-cycle checkpoint. To investigate the impact of HPV16 E6 and E7 on the cell-cycle regulatory machinery in oral epithelial cells, normal human oral epithelial cells were transfected with HPV16 E6 and E7 open reading frames, and alterations in cell-cycle regulatory proteins in cells expressing HPV16 E6 and E7 were analyzed. E6 and E7 expression results in immortalization of oral epithelial cells. E7 inactivates retinoblastoma protein (Rb) by forming complexes with hypophosphorylated Rb in immortalized oral epithelial cells. P53 and P21 protein levels were increased in immortalized cells compared to normal primary oral epithelial cells. Cyclin D1-cell-cycle-dependent kinase 4 binary association is disrupted in immortalized oral epithelial cells. These results indicate that E7 plays an important role in abrogation of cell-cycle regulation in oral epithelial cells, with E6 having a smaller impact. This suggests that the pathogenesis of HPV in oral epithelial cells differs from that in cervical epithelial cells.


Asunto(s)
Proteínas de Ciclo Celular/metabolismo , Transformación Celular Viral/fisiología , Células Epiteliales/virología , Papillomavirus Humano 16/patogenicidad , Proteínas Oncogénicas Virales/metabolismo , Proteínas Represoras/metabolismo , Western Blotting , Línea Celular Transformada/virología , Ciclina D1/metabolismo , Quinasa 4 Dependiente de la Ciclina/metabolismo , Inhibidor p16 de la Quinasa Dependiente de Ciclina/metabolismo , Inhibidor p21 de las Quinasas Dependientes de la Ciclina/metabolismo , Células Epiteliales/metabolismo , Humanos , Inmunoprecipitación , Mucosa Bucal/citología , Proteínas E7 de Papillomavirus , Proteína de Retinoblastoma/metabolismo , Transfección , Proteína p53 Supresora de Tumor/metabolismo
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