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1.
Microb Cell Fact ; 23(1): 179, 2024 Jun 18.
Artículo en Inglés | MEDLINE | ID: mdl-38890717

RESUMEN

BACKGROUND: Human lysozyme (hLYZ) is a natural antibacterial protein with broad applications in food and pharmaceutical industries. Recombinant production of hLYZ in Komagataella phaffii (K. phaffii) has attracted considerable attention, but there are very limited strategies for its hyper-production in yeast. RESULTS: Here through Atmospheric and Room Temperature Plasma (ARTP)-based mutagenesis and transcriptomic analysis, the expression of two genes MYO1 and IQG1 encoding the cytokinesis core proteins was identified downregulated along with higher hLYZ production. Deletion of either gene caused severe cytokinesis defects, but significantly enhanced hLYZ production. The highest hLYZ yield of 1,052,444 ± 23,667 U/mL bioactivity and 4.12 ± 0.11 g/L total protein concentration were obtained after high-density fed-batch fermentation in the Δmyo1 mutant, representing the best production of hLYZ in yeast. Furthermore, O-linked mannose glycans were characterized on this recombinant hLYZ. CONCLUSIONS: Our work suggests that cytokinesis-based morphology engineering is an effective way to enhance the production of hLYZ in K. phaffii.


Asunto(s)
Muramidasa , Proteínas Recombinantes , Saccharomycetales , Muramidasa/metabolismo , Muramidasa/genética , Muramidasa/biosíntesis , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Saccharomycetales/metabolismo , Saccharomycetales/genética , Humanos , Fermentación , Citocinesis , Ingeniería Metabólica/métodos , Técnicas de Cultivo Celular por Lotes
2.
Protein Expr Purif ; 190: 105993, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-34656738

RESUMEN

Several sperm lysozyme-like genes evolved from lysozyme by successive duplications and mutations; however their functional role in the reproduction of farm animals is not well understood. To understand the function and molecular properties of buffalo sperm lysozyme-like protein 1 (buSLLP1), it was expressed in E. coli; however, it partitioned to inclusion bodies. Lowering of temperature and inducer concentration did not help in the recovery of the expressed protein in the biologically active form. Therefore, buSLLP1 was cloned and expressed in Pichiapink system based on auxotrophic Pichia pastoris in a labscale fermenter. The expressed protein was obtained in flow-through by using a 30 kDa ultrafiltration membrane followed by MonoQ anion exchange chromatography, resulting in a homogenous preparation of 40 mg recombinant buSLLP1 per liter of initial spent culture-supernatant. Circular dichroism spectroscopy showed that recombinant buSLLP1 possessed a native-like secondary structure. The recombinant buSLLP1 also showed thermal denaturation profile typical of folded globular proteins; however, the thermal stability was lower than the hen egg white lysozyme. Binding of buSLLP1 to chitin and zona pellucida of buffalo oocytes showed that the recombinant buSLLP1 possessed a competent binding pocket, therefore, the produced protein could be used to study its functional role in the reproduction of farm animals.


Asunto(s)
Búfalos/genética , Expresión Génica , Muramidasa , Animales , Escherichia coli/genética , Escherichia coli/metabolismo , Muramidasa/biosíntesis , Muramidasa/química , Muramidasa/genética , Muramidasa/aislamiento & purificación , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Saccharomycetales/genética , Saccharomycetales/metabolismo
3.
Mucosal Immunol ; 14(6): 1358-1368, 2021 11.
Artículo en Inglés | MEDLINE | ID: mdl-34465896

RESUMEN

Young age is a risk factor for respiratory and gastrointestinal infections. Here, we compared infant and adult mice to identify age-dependent mechanisms that drive susceptibility to mucosal infections during early life. Transcriptional profiling of the upper respiratory tract (URT) epithelium revealed significant dampening of early life innate mucosal defenses. Epithelial-mediated production of the most abundant antimicrobial molecules, lysozyme, and lactoferrin, and the polymeric immunoglobulin receptor (pIgR), responsible for IgA transcytosis, was expressed in an age-dependent manner. This was attributed to delayed functional development of serous cells. Absence of epithelial-derived lysozyme and the pIgR was also observed in the small intestine during early life. Infection of infant mice with lysozyme-susceptible strains of Streptococcus pneumoniae or Staphylococcus aureus in the URT or gastrointestinal tract, respectively, demonstrated an age-dependent regulation of lysozyme enzymatic activity. Lysozyme derived from maternal milk partially compensated for the reduction in URT lysozyme activity of infant mice. Similar to our observations in mice, expression of lysozyme and the pIgR in nasopharyngeal samples collected from healthy human infants during the first year of life followed an age-dependent regulation. Thus, a global pattern of reduced antimicrobial and IgA-mediated defenses may contribute to increased susceptibility of young children to mucosal infections.


Asunto(s)
Antiinfecciosos/metabolismo , Células Epiteliales/metabolismo , Inmunidad Innata , Inmunidad Mucosa , Membrana Mucosa/inmunología , Membrana Mucosa/metabolismo , Factores de Edad , Animales , Péptidos Antimicrobianos/biosíntesis , Biomarcadores , Resistencia a la Enfermedad , Regulación de la Expresión Génica , Humanos , Inmunohistoquímica , Ratones , Muramidasa/biosíntesis , Muramidasa/genética , Especificidad de Órganos
4.
Mol Immunol ; 135: 204-216, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-33930715

RESUMEN

Beauveria bassiana is a harmful pathogen to the economically important insect silkworm, always causes serious disease to the silkworm, which results in great losses to the sericulture industry. In order to explore the silkworm (Bombyx mori) response to B. bassiana infection, differential proteomes of the silkworm responsive to B. bassiana infection were identified with isobaric tags for relative and absolute quantitation (iTRAQ) at the different stage of the 3rd instar silkworm larvae. Among the 5040 proteins identified with confidence level of ≥95 %, total 937 proteins were differentially expressed, of which 488 proteins were up-regulated and 449 proteins were down-regulated. 23, 15, 250, 649 differentially expressed proteins (DEPs) were reliably quantified by iTRAQ analysis in the B. bassiana infected larvae at 18, 24, 36, 48 h post infection (hpi) respectively. Based on GO annotations, 6, 4, 128, 316 DEPs were involved in biological processes, 12, 5, 143, 376 DEPs were involved in molecular functions, and 6, 3, 108, 256 DEPs were involved in cell components at 18, 24, 36, 48 hpi respectively. KEGG pathway analysis displayed that 18, 12, 210, 548 DEPs separately participated in 63, 35, 201, 264 signal transduction pathways at different time of infection, and moreover a higher proportion of DEPs involved in metabolic pathways. The cluster analysis on the DEPs of different infection stages distinguished a co-regulated DEP, lysozyme precursor, which was up-regulated at both the mRNA level and the protein level, indicating that the lysozyme protein kept playing an important role in defending the silkworm against B. bassiana infection. This was the first report using an iTRAQ approach to analyze proteomes of the whole silkworm against B. bassiana infection, which contributes to better understanding the defense mechanisms of silkworm to B. bassiana infection and provides important experimental data for the identification of key factors involved in the interaction between the pathogenic fungus and its host.


Asunto(s)
Beauveria/inmunología , Bombyx/inmunología , Bombyx/microbiología , Inmunidad Innata/inmunología , Muramidasa/metabolismo , Animales , Beauveria/patogenicidad , Bombyx/metabolismo , Regulación de la Expresión Génica/inmunología , Larva/metabolismo , Larva/microbiología , Muramidasa/biosíntesis , Muramidasa/genética , Proteoma/análisis , Proteómica/métodos , Transducción de Señal , Espectrometría de Masas en Tándem/métodos
5.
Gastroenterol Hepatol ; 43(6): 293-300, 2020.
Artículo en Inglés, Español | MEDLINE | ID: mdl-32278502

RESUMEN

INTRODUCTION: To study the expression of defensin-5 (RD-5), soluble phospholipase A2 (sPLA2) and lysozyme in the intestine in a rat model of acute liver failure and its relationship with intestinal bacterial translocation (BT). PATIENTS AND METHODS: Sprague-Dawley (SD) rats were divided into two groups. The experimental group was divided into five subgroups according to the lapsing time after the model was established, which were designated accordingly as 8h, 16h, 24h, 48h, and 72h groups. Acute liver failure (ALF) model was induced by intraperitoneal injection of 10% d-galactosamine. The homogenates of mesenteric lymph nodes (MLNs), liver and spleen from each group were cultured in agar to determine the bacterial outgrowth. The mRNA expression of RD-5, sPLA2, lysozyme and the protein expression of sPLA2, lysozyme were determined. RESULTS: No bacteria grew in the organ cultures from the control group while experimental groups had positive cultures. Expression of the RD-5 and sPLA2 mRNA in the experimental groups gradually increased at early time points and peaked 16h after induction of ALF, then progressively decreased. The mRNA expression of lysozyme in the experimental group peaked at 8h after ALF induction, then progressively decreased. Similar results were obtained with Western blot and immunohistochemical staining. DISCUSSION: The immune barrier function of the ileal mucosa in the rat model of acute liver failure was compromised as demonstrated by the decreased expression of RD-5, sPLA2 and lysozyme in Paneth cells along with increased intestinal bacterial translocation.


Asunto(s)
Traslocación Bacteriana , Mucosa Intestinal/metabolismo , Intestinos/microbiología , Fallo Hepático Agudo/metabolismo , Muramidasa/biosíntesis , Fosfolipasas A2/biosíntesis , Animales , Modelos Animales de Enfermedad , Masculino , Ratas , Ratas Sprague-Dawley
6.
Curr Microbiol ; 77(5): 846-854, 2020 May.
Artículo en Inglés | MEDLINE | ID: mdl-31932996

RESUMEN

In this work, the high-level expression of the human lysozyme (HLY) was achieved by both optimization of the gene copy number and co-expression of the transcription factor Hac1p for the unfolded protein response (UPR) in the host strain Pichia pastoris KM71H. A series of recombinant constructs with various numbers of HLY expression cassettes was generated for the production of recombinant strains integrated with different copies of the HLY gene. The copy number of the HLY gene was determined by real-time quantitative polymerase chain reaction, and the recombinant strains of P. pastoris carrying one, two, three, four, or six copies of the HLY gene were obtained. Maximum extracellular protein and lysozyme enzyme activity reached 436.99 ± 26.08 µg/mL and 61,900 ± 2036.47 U/mL, respectively, in the recombinant strain HLYH4-3 with the four copies of the HLY gene after shaking flask fermentation. Moreover, the co-expression of the transcription factor Hac1p in the recombinant strains further enhanced the HLY yields. Extracellular protein and lysozyme enzyme activity, respectively, reached 517.82 ± 4.19 µg/mL and 78,600 ± 1134.95 U/mL by using the Hac1p co-expression strain HLYH4-3/Hac1p. These values are the highest recorded level of human lysozyme expressed by P. pastoris in shaking flask fermentation so far.


Asunto(s)
Dosificación de Gen , Muramidasa/biosíntesis , Pichia/genética , Factores de Transcripción/genética , Técnicas de Cultivo Celular por Lotes , Fermentación , Proteínas Fúngicas/genética , Regulación de la Expresión Génica , Humanos , Muramidasa/genética , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Respuesta de Proteína Desplegada
7.
Int J Mol Sci ; 21(2)2020 Jan 13.
Artículo en Inglés | MEDLINE | ID: mdl-31941098

RESUMEN

Lysozymes are key antimicrobial peptides in the host innate immune system that protect against pathogen infection. In this study, the full-length cDNAs of two c-type lysozymes (gfLyz-C1 and gfLyz-C2) were cloned from goldfish (Carassius auratus). The structural domains, three-dimensional structures, and amino acid sequences of gfLyz-C1 and gfLyz-C2 were highly comparable, as the two proteins shared 89.7% sequence identity. The gfLyz-C1 and gfLyz-C2 recombinant proteins were generated in the insoluble fractions of an Escherichia coli system. Based on the results of lysoplate and turbidimetric assays, gfLyz-C1 and gfLyz-C2 showed broad-spectrum antimicrobial properties with high levels of activity against Micrococcus lysodeikticus, Vibrio parahemolyticus, and Edwardsiella tarda, and relatively low activity against E. coli. Both gfLyz-C1 and gfLyz-C2 mRNAs were mainly expressed in the trunk kidney and head kidney, and gfLyz-C1 was expressed at much higher levels than gfLyz-C2 in the corresponding tissues. The expression of the gfLyz-C1 and gfLyz-C2 transcripts in the trunk kidney and head kidney was induced in these tissues by challenge with heat-inactivated E. coli and lipopolysaccharides (LPS), and the transcriptional responses of gfLyz-C1 were more intense. In goldfish primary trunk kidney cells, the levels of the gfLyz-C1 and gfLyz-C2 transcripts were upregulated by heat-inactivated E. coli, V. parahemolyticus, and E. tarda, as well as LPS, and downregulated by treatment with dexamethasone and leptins. Overall, this study may provide new insights that will improve our understanding of the roles of c-type lysozymes in the innate immunity of cyprinid fish, including the structural and phylogenetic characteristics, antimicrobial effects, and regulatory mechanism.


Asunto(s)
Antiinfecciosos , Bacterias/metabolismo , Dexametasona/farmacología , Proteínas de Peces , Regulación Enzimológica de la Expresión Génica/efectos de los fármacos , Carpa Dorada , Leptina/farmacología , Lipopolisacáridos/toxicidad , Muramidasa , Transcripción Genética/efectos de los fármacos , Animales , Antiinfecciosos/química , Antiinfecciosos/metabolismo , Proteínas de Peces/biosíntesis , Proteínas de Peces/química , Proteínas de Peces/genética , Carpa Dorada/genética , Carpa Dorada/metabolismo , Muramidasa/biosíntesis , Muramidasa/química , Muramidasa/genética
8.
Fish Shellfish Immunol ; 98: 334-341, 2020 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-31881330

RESUMEN

Tumor necrosis factors (TNFs) are a group of multifunctional inflammatory cytokines involved in various pathological and immune processes. Recently, a few primitive TNFs have been characterized from molluscs, which play important roles in modulating cell apoptosis, phagocytosis and production of immune-related enzymes. In the present study, a novel TNF (named as CgTNF-2) with the activity to mediate antibacterial response was identified from the Pacific oyster Crassostrea gigas. The open reading frame of CgTNF-2 was of 783 bp encoding a putative polypeptide of 261 amino acids with a typical TNF domain. The deduced amino acid sequence of CgTNF-2 shared high identity with that of TNFs previously identified from other molluscs, such as 96.1% identity with that in oyster C. hongkongensis, 33.7% identity with that in scallop Mizuhopecten yessoensis and 33.0% identity with CgTNF-1 in oyster C. gigas. There were two distinct TNF branches of vertebrate and invertebrate in the phylogenetic tree, and CgTNF-2 was firstly clustered with TNF-14 from C. hongkongensis, and then clustered with other molluscan TNFs. The mRNA transcripts of CgTNF-2 were widely expressed in various oyster tissues, with the highest expression level in hemocytes. The expression level of CgTNF-2 increased significantly at 6 h (2.45-fold and 6.20-fold, respectively, p < 0.05) after peptidoglycan and lipopolysaccharides treatments, and peaked at 12 h (31.86-fold and 7.90-fold, respectively, p < 0.05). The recombinant protein of CgTNF-2 (rCgTNF-2) inhibited the growth of human alveolar basal epithelial (A549) cells at a concentration of 800 ng/mL. After the oysters received an injection of rCgTNF-2, the serum from those oysters exhibited significantly higher antibacterial activity compared to that from control group, evidenced by inhibiting the growth of Vibrio splendidus. Moreover, the lysozyme activity as well as the contents of nitric oxide in the oyster serum also increased significantly. The above results collectively suggested that CgTNF-2 was a novel member of bivalve TNF-α family, which could prompt the antibacterial activity by inducing the lysozyme activity and the production of nitric oxide in the innate immune response of oyster.


Asunto(s)
Actividad Bactericida de la Sangre , Crassostrea/inmunología , Muramidasa/biosíntesis , Óxido Nítrico/biosíntesis , Factor de Necrosis Tumoral alfa/metabolismo , Células A549 , Secuencia de Aminoácidos , Animales , Actividad Bactericida de la Sangre/efectos de los fármacos , Supervivencia Celular/efectos de los fármacos , Clonación Molecular , Crassostrea/clasificación , Crassostrea/genética , Hemocitos/metabolismo , Humanos , Cinética , Muramidasa/sangre , Óxido Nítrico/sangre , Filogenia , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/farmacología , Distribución Tisular , Factor de Necrosis Tumoral alfa/química , Factor de Necrosis Tumoral alfa/genética , Factor de Necrosis Tumoral alfa/farmacología , Vibrio/fisiología
9.
Environ Pollut ; 251: 746-755, 2019 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-31121539

RESUMEN

Gabapentin (GPT) has become an emerging contaminant in aquatic environments due to its wide application in medical treatment all over the world. In this study, embryos of zebrafish were exposed to gabapentin at realistically environmental concentrations, 0.1 µg/L and 10 µg/L, so as to evaluate the ecotoxicity of this emergent contaminant. The transcriptomics profiling of deep sequencing was employed to illustrate the mechanisms. The zebrafish (Danio rerio) embryo were exposed to GPT from 12 hpf to 96 hpf resulting in 136 and 750 genes differentially expressed, respectively. The results of gene ontology (GO) analysis and the Kyoto encyclopedia of genes and genomes (KEGG) pathway analysis illustrated that a large amount of differentially expressed genes (DEGs) were involved in the antioxidant system, the immune system and the nervous system. RT-qPCR was applied to validate the results of RNA-seq, which provided direct evidence that the selected genes involved in those systems mentioned above were all down-regulated. Acetylcholinesterase (AChE), lysozyme (LZM) and the content of C-reactive protein (CRP) were decreased at the end of exposure, which is consistent with the transcriptomics results. The overall results of this study demonstrate that GPT simultaneously affects various vital functionalities of zebrafish at early developmental stage, even at environmentally relevant concentrations.


Asunto(s)
Embrión no Mamífero/embriología , Gabapentina/toxicidad , Sistema Inmunológico/embriología , Sistema Nervioso/embriología , Contaminantes Químicos del Agua/toxicidad , Pez Cebra/embriología , Acetilcolinesterasa/biosíntesis , Animales , Proteína C-Reactiva/biosíntesis , Regulación hacia Abajo , Perfilación de la Expresión Génica , Secuenciación de Nucleótidos de Alto Rendimiento , Muramidasa/biosíntesis
10.
Semin Cell Dev Biol ; 88: 129-137, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-29432952

RESUMEN

The gastrointestinal tract is a complex environment in which the host immune system interacts with a diverse array of microorganisms, both symbiotic and pathogenic. As such, mobilizing a rapid and appropriate antimicrobial response depending on the nature of each stimulus is crucial for maintaining the balance between homeostasis and inflammation in the gut. Here we focus on the mechanisms by which intestinal antimicrobial peptides regulate microbial communities during dysbiosis and infection. We also discuss classes of bacterial peptides that contribute to reducing enteric pathogen outgrowth. This review aims to provide a comprehensive overview on the interplay of diverse antimicrobial responses with enteric pathogens and the gut microbiota.


Asunto(s)
Bacteriocinas/inmunología , Defensinas/inmunología , Disbiosis/prevención & control , Tracto Gastrointestinal/inmunología , Mucosa Intestinal/inmunología , Animales , Bacteriocinas/biosíntesis , Bacteriocinas/farmacología , Catelicidinas/biosíntesis , Catelicidinas/inmunología , Catelicidinas/farmacología , Defensinas/biosíntesis , Defensinas/farmacología , Disbiosis/inmunología , Disbiosis/microbiología , Microbioma Gastrointestinal/inmunología , Tracto Gastrointestinal/efectos de los fármacos , Tracto Gastrointestinal/microbiología , Expresión Génica/inmunología , Humanos , Inmunidad Mucosa/efectos de los fármacos , Inflamación , Mucosa Intestinal/efectos de los fármacos , Mucosa Intestinal/microbiología , Lipocalina 2/biosíntesis , Lipocalina 2/inmunología , Lipocalina 2/farmacología , Muramidasa/biosíntesis , Muramidasa/inmunología , Muramidasa/farmacología , Simbiosis/inmunología
11.
Biotechnol Appl Biochem ; 66(2): 202-208, 2019 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-30382618

RESUMEN

The use of lactoferrin antimicrobial peptides and lysozymes as traditional antibiotic alternatives is suitable for solving drug residue and pathogen resistance. In this study, bovine lactoferrin (LfcinB) and human lysozyme (hLY) were combined through fusion expression in Pichia pastoris GS115 driven by constitutive GAP promoter. For neutralizing the toxic property of the antimicrobial peptide, anion antioxidant peptides from porcine myofibrillar protein and enzymatically hydrolyzed chicken egg white were fused to the hybrid antimicrobial peptide LfcinB-hLY. The 72-H culture supernatant of the strain GS-LfcinB-hLY exhibited antibacterial activity toward both Escherichia coli K88 and Staphylococcus aureus (ATCC 25923). The LfcinB-hLY yield was 15.7 mg/L, and approximately 1.8 mg of pure LfcinB-hLY was obtained from 500 mL of cell culture after purification via ion exchange and reversed-phase chromatography. The LfcinB-hLY fusion peptide demonstrates good antibacterial activity toward both Gram-positive and Gram-negative bacteria. This recombination protein with good stability demonstrates a potential use as animal feed additive to partly replace antibiotics.


Asunto(s)
Péptidos Catiónicos Antimicrobianos , Escherichia coli/crecimiento & desarrollo , Lactoferrina , Muramidasa , Proteínas Recombinantes de Fusión , Staphylococcus aureus/crecimiento & desarrollo , Animales , Péptidos Catiónicos Antimicrobianos/biosíntesis , Péptidos Catiónicos Antimicrobianos/genética , Péptidos Catiónicos Antimicrobianos/farmacología , Bovinos , Humanos , Lactoferrina/biosíntesis , Lactoferrina/genética , Lactoferrina/farmacología , Muramidasa/biosíntesis , Muramidasa/genética , Muramidasa/farmacología , Pichia/genética , Pichia/metabolismo , Proteínas Recombinantes de Fusión/biosíntesis , Proteínas Recombinantes de Fusión/genética , Proteínas Recombinantes de Fusión/farmacología
12.
Dev Comp Immunol ; 93: 66-77, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30590065

RESUMEN

As pattern recognition receptors (PRRs), C-type lectins (CTLs) play crucial roles in recognizing and eliminating pathogens in innate immunity. In this study, a novel CTL (HcCUB-Lec) was identified from the triangle sail mussel Hyriopsis cumingii. The full-length of HcCUB-Lec cDNA was 1558 bp with an open reading frame of 1281 bp that encodes a putative protein of 426 amino acid residues, including an N-terminal signal peptide, a complement Uegf Bmp1 (CUB) domain, a single carbohydrate recognition domain (CRD), and a transmembrane domain. Quantitative real-time PCR analysis revealed that HcCUB-Lec transcript was distributed in all examined tissues with the highest levels in hepatopancreas and was significantly upregulated in gills and hepatopancreas after immune challenge with Staphyloccocus aureus and Vibrio parahaemolyticus. When HcCUB-Lec was silenced by RNAi, the expression levels of three antimicrobial peptides, including whey acidic protein (HcWAP), defensin (HcDef), and lysozyme (HcLyso), were dramatically decreased in gills. The recombinant HcCUB-Lec and its individual CUB and CRD domains can bind with Gram-positive bacteria (S. aureus and Bacillus subtilis), Gram-negative bacteria (V. parahaemolyticus and Aeromonas hydrophila), and polysaccharides (lipopolysaccharide and peptidoglycan). Moreover, rHcCUB-Lec and its domains could also agglutinate S. aureus and V. parahaemolyticus in the presence of Ca2+ and can clear V. parahaemolyticus in H. cumingii. Results of this study suggest that HcCUB-Lec acts as an antimicrobial PRR that participates in the innate immune responses of H. cumingii.


Asunto(s)
Bivalvos/inmunología , Lectinas Tipo C/inmunología , Receptores de Reconocimiento de Patrones/inmunología , Staphylococcus aureus/inmunología , Vibrio parahaemolyticus/inmunología , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Defensinas/biosíntesis , Branquias/inmunología , Hepatopáncreas/inmunología , Inmunidad Innata/inmunología , Lectinas Tipo C/genética , Proteínas de la Leche/biosíntesis , Muramidasa/biosíntesis , Interferencia de ARN , ARN Interferente Pequeño/genética , Receptores de Reconocimiento de Patrones/genética
13.
ACS Synth Biol ; 7(2): 510-521, 2018 02 16.
Artículo en Inglés | MEDLINE | ID: mdl-29295615

RESUMEN

Although polyethylene glycol (PEG) is commonly used to improve protein stability and therapeutic efficacy, the optimal location for attaching PEG onto proteins is not well understood. Here, we present a cell-free protein synthesis-based screening platform that facilitates site-specific PEGylation and efficient evaluation of PEG attachment efficiency, thermal stability, and activity for different variants of PEGylated T4 lysozyme, including a di-PEGylated variant. We also report developing a computationally efficient coarse-grain simulation model as a potential tool to narrow experimental screening candidates. We use this simulation method as a novel tool to evaluate the locational impact of PEGylation. Using this screen, we also evaluated the predictive impact of PEGylation site solvent accessibility, conjugation site structure, PEG size, and double PEGylation. Our findings indicate that PEGylation efficiency, protein stability, and protein activity varied considerably with PEGylation site, variations that were not well predicted by common PEGylation guidelines. Overall our results suggest current guidelines are insufficiently predictive, highlighting the need for experimental and simulation screening systems such as the one presented here.


Asunto(s)
Bacteriófago T4/enzimología , Escherichia coli/química , Expresión Génica , Modelos Biológicos , Muramidasa/biosíntesis , Polietilenglicoles/química , Proteínas Virales/biosíntesis , Bacteriófago T4/genética , Sistema Libre de Células/química , Escherichia coli/genética , Muramidasa/química , Muramidasa/genética , Proteínas Recombinantes/sangre , Proteínas Recombinantes/genética , Proteínas Virales/química , Proteínas Virales/genética
14.
Regul Toxicol Pharmacol ; 89: 57-69, 2017 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-28720348

RESUMEN

Safety evaluation of a muramidase produced by a Trichoderma reesei strain (safe lineage), expressing a muramidase gene isolated from Acremonium alcalophilum is presented. Intended use in feed of this enzyme is as digestive aid in broiler chickens. Muramidase 007, was non-mutagenic and non-clastogenic in vitro, and no adverse effects were observed in 90-day subchronic toxicity studies in rats at doses up to 1132 mg TOS/kg body weight/day. The enzyme did not exhibit, in vitro, skin, nor eye irritation potential. Acute aquatic toxicity evaluated on daphnia and algae showed absence of effect of the enzyme at the standard doses tested. Muramidase 007 was fully tolerated by broiler chickens in a 6-weeks tolerance study showing no adverse effects in any of the dietary treatments (0, 1×, 5× and 10× maximum recommended dose). In conclusion, Muramidase 007 is found to be toxicologically inert, and there are no worker's safety concerns if standard precautions are instituted and a non-dusty formulation is employed. Muramidase 007 is well tolerated by the target species (broiler chickens) and cause no harm to the environment. The beneficial safety evaluation of Muramidase 007 is in line with this type of enzyme that is found ubiquitously in nature.


Asunto(s)
Alimentación Animal/toxicidad , Pollos , Muramidasa/toxicidad , Trichoderma/enzimología , Acremonium/genética , Animales , Seguridad de Productos para el Consumidor , Daphnia/efectos de los fármacos , Ojo/efectos de los fármacos , Muramidasa/biosíntesis , Muramidasa/genética , Ratas , Seguridad , Piel/efectos de los fármacos , Pruebas de Toxicidad Aguda , Pruebas de Toxicidad Subcrónica/métodos
15.
Microbiology (Reading) ; 163(6): 829-839, 2017 06.
Artículo en Inglés | MEDLINE | ID: mdl-28635591

RESUMEN

Multiple interacting factors affect the performance of engineered biological systems in synthetic biology projects. The complexity of these biological systems means that experimental design should often be treated as a multiparametric optimization problem. However, the available methodologies are either impractical, due to a combinatorial explosion in the number of experiments to be performed, or are inaccessible to most experimentalists due to the lack of publicly available, user-friendly software. Although evolutionary algorithms may be employed as alternative approaches to optimize experimental design, the lack of simple-to-use software again restricts their use to specialist practitioners. In addition, the lack of subsidiary approaches to further investigate critical factors and their interactions prevents the full analysis and exploitation of the biotechnological system. We have addressed these problems and, here, provide a simple-to-use and freely available graphical user interface to empower a broad range of experimental biologists to employ complex evolutionary algorithms to optimize their experimental designs. Our approach exploits a Genetic Algorithm to discover the subspace containing the optimal combination of parameters, and Symbolic Regression to construct a model to evaluate the sensitivity of the experiment to each parameter under investigation. We demonstrate the utility of this method using an example in which the culture conditions for the microbial production of a bioactive human protein are optimized. CamOptimus is available through: (https://doi.org/10.17863/CAM.10257).


Asunto(s)
Biología Computacional/métodos , Muramidasa/biosíntesis , Pichia/genética , Algoritmos , Evolución Biológica , Biotecnología , Biología Computacional/instrumentación , Humanos , Internet , Muramidasa/genética , Pichia/metabolismo , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Programas Informáticos
16.
Dev Comp Immunol ; 73: 109-118, 2017 08.
Artículo en Inglés | MEDLINE | ID: mdl-28344168

RESUMEN

Lysozymes play an important role in the innate immune responses with which mollusks respond to bacterial invasion through its lytic activity. In the present study, two c-type lysozymes (designed as VpCLYZ-1 and VpCLYZ-2, respectively) were identified and characterized from the manila clam Venerupis philippinarum. The full-length cDNA of VpCLYZ-1 and VpCLYZ-2 was of 629 and 736 bp, encoding a polypeptide of 156 and153 amino acid residues, respectively. The deduced amino acid sequences of VpCLYZs showed high similarity to other known invertebrate c-type lysozymes. Multiple alignments and phylogenetic relationship strongly suggested that VpCLYZ-1 and VpCLYZ-2 belonged to the c-type lysozyme family. Both VpCLYZ-1 and VpCLYZ-2 transcripts were constitutively expressed in a wide range of tissues with different levels. The VpCLYZ-1 transcript was dominantly expressed in hepatopancreas and hemocytes, while VpCLYZ-2 transcript was mainly expressed in the tissues of hepatopancreas and gills. Both the mRNA expression of VpCLYZ-1 and VpCLYZ-2 was significantly up-regulated at 12 h post Vibrio anguillarum challenge. The recombinant VpCLYZ-1 and VpCLYZ-2 (designed as rVpCLYZ-1 and rVpCLYZ-2) exhibited lytic activity against all tested bacteria, and rVpCLYZ-1 showed higher activities than rVpCLYZ-2 in killing Micrococcus luteus and V. anguillarum. Overall, our results suggested that VpCLYZ-1 and VpCLYZ-2 belonged to the c-type lysozyme family, and played important roles in the immune responses of manila clam, especially in the elimination of pathogens.


Asunto(s)
Bivalvos/inmunología , Inmunidad Innata/inmunología , Muramidasa/inmunología , Animales , Bivalvos/enzimología , Perfilación de la Expresión Génica , Muramidasa/biosíntesis , Transcriptoma
17.
Poult Sci ; 96(7): 2447-2453, 2017 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-28339926

RESUMEN

Due to its antimicrobial properties and low toxicity, human lysozyme (hLYZ) has broad application in the medical field and as a preservative used by the food industry. However, limited availability hinders its widespread use. Hence, we constructed a recombinant avian adeno-associated virus (rAAAV) that would specifically express hLYZ in the chicken oviduct and harvested hLYZ from the egg whites of laying hens. The oviduct-specific human lysozyme expression cassette flanked by avian adeno-associated virus (AAAV) inverted terminal repeats (ITRs) was subcloned into the modified baculovirus transfer vector pFBX, and then the recombinant baculovirus rBac-ITRLYZ was generated. The recombinant avian adeno-associated virus was produced by co-infecting Sf9 cells with rBac-ITRLYZ and the other 2 baculoviruses containing AAAV functional genes and structural genes, respectively. Electron microscopy and real-time PCR revealed that the recombinant viral particles were generated successfully with a typical AAAV morphology and a high titer. After one intravenous injection of each laying hen with 2 × 1011 viral particles, oviduct-specific expression of recombinant human lysozyme (rhLYZ) was detected by reverse transcription-PCR. The expression level of rhLYZ in the first wk increased to 258 ± 11.5 µg/mL, reached a maximum of 683 ± 16.4 µg/mL at the fifth wk, and then progressively declined during the succeeding 7 wk of the study. Western blotting indicated that the oviduct-expressed rhLYZ had the same molecular weight as the natural enzyme. These results indicate that an efficient and convenient oviduct bioreactor mediated by rAAAV has been established, and it is useful for production of other recombinant proteins.


Asunto(s)
Pollos/metabolismo , Muramidasa/biosíntesis , Oviductos/metabolismo , Parvovirinae/genética , Animales , Reactores Biológicos , Pollos/genética , Femenino , Humanos , Microorganismos Modificados Genéticamente , Muramidasa/genética , Oviductos/fisiología , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética
18.
Protein Sci ; 25(11): 2102-2108, 2016 11.
Artículo en Inglés | MEDLINE | ID: mdl-27515297

RESUMEN

Recombinant protein production is at the core of biotechnology and numerous molecular tools and bacterial strains have been developed to make the process more efficient. One commonly used generic solution is to supply extra copies of low-abundance tRNAs to compensate for the presence of complementary rare codons in genes-of-interest. Here we show that such extra tRNA, supplied by the commonly used pLysSRARE2 plasmid, can cause two side effects: (1) growth and gene expression can be impaired, and (2) apparent positive effects can be caused by differential expression of the lysozyme gene encoded on the same plasmid and not the tRNAs per se. These phenomena seem to have been largely overlooked despite the huge popularity of the T7/pET-based systems for bacterial protein production.


Asunto(s)
Escherichia coli , Expresión Génica , Muramidasa , ARN de Transferencia , Escherichia coli/genética , Escherichia coli/metabolismo , Muramidasa/biosíntesis , Muramidasa/genética , Plásmidos/genética , Plásmidos/metabolismo , ARN de Transferencia/genética , ARN de Transferencia/metabolismo , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética
19.
Head Neck Pathol ; 10(4): 429-436, 2016 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-27177644

RESUMEN

Lysozyme is an enzymatic marker of acinar and intercalated duct cells of normal salivary glands. The aim of this study was to verify whether lysozyme expression could be useful to distinguish acinic cell carcinoma (ACC) from its main mimic, mammary analog secretory carcinoma (MASC). For comparison, DOG1 expression was analyzed as well. Seventeen cases of ACC, 15 MASC, and 125 other salivary tumors were studied. Lysozyme expression was found in tumor cells as well as in secreted material of MASC (86.6 % of cases) and in ductal cells of epithelial-myoepithelial carcinoma (EMC-53.8 %), pleomorphic adenoma (PA-29.1 %) and polymorphous low-grade adenocarcinoma (PLGA-23.8 %). However, in ACC, lysozyme was not expressed. Three patterns of DOG1 staining were seen: apical-luminal, cytoplasmic, and mixed cytoplasmic/membranous. The apical-luminal pattern was detected in ductal cells of ACC (58.8 % of cases), EMC (38.4 %), adenoid-cystic carcinoma (AdCC-35.3 %), PA (8.3 %), and PLGA (4.8 %). These tumors also showed mixed membranous/cytoplasmic staining for DOG1. MASC, mucoepidermoid, and salivary duct carcinomas exhibited only DOG1 cytoplasmic staining. In conclusion, lysozyme cannot be used as a marker of acinar differentiation in salivary tumors. However, lysozyme expression can be helpful to distinguish MASC from ACC due to its high frequency in the former and absence in ACC. It is likely that in MASC, lysozyme expression may reflect a lactational-like secretory differentiation since lysozyme belongs to breast milk proteins. Regarding DOG1 expression, the apical-luminal pattern is related to acinar and intercalated duct differentiation whereas the cytoplasmic staining does not seem to be associated with a specific cellular phenotype.


Asunto(s)
Biomarcadores de Tumor/análisis , Carcinoma de Células Acinares/diagnóstico , Carcinoma Secretor Análogo al Mamario/diagnóstico , Muramidasa/biosíntesis , Neoplasias de las Glándulas Salivales/diagnóstico , Adulto , Anciano , Carcinoma de Células Acinares/enzimología , Diagnóstico Diferencial , Femenino , Humanos , Inmunohistoquímica , Masculino , Carcinoma Secretor Análogo al Mamario/enzimología , Persona de Mediana Edad , Muramidasa/análisis , Neoplasias de las Glándulas Salivales/enzimología , Adulto Joven
20.
Sci Rep ; 6: 22947, 2016 Mar 10.
Artículo en Inglés | MEDLINE | ID: mdl-26961596

RESUMEN

Human lysozyme is an important natural non-specific immune protein that is highly expressed in breast milk and participates in the immune response of infants against bacterial and viral infections. Considering the medicinal value and market demand for human lysozyme, an animal model for large-scale production of recombinant human lysozyme (rhLZ) is needed. In this study, we generated transgenic cloned cows with the marker-free vector pBAC-hLF-hLZ, which was shown to efficiently express rhLZ in cow milk. Seven transgenic cloned cows, identified by polymerase chain reaction, Southern blot, and western blot analyses, produced rhLZ in milk at concentrations of up to 3149.19 ± 24.80 mg/L. The purified rhLZ had a similar molecular weight and enzymatic activity as wild-type human lysozyme possessed the same C-terminal and N-terminal amino acid sequences. The preliminary results from the milk yield and milk compositions from a naturally lactating transgenic cloned cow 0906 were also tested. These results provide a solid foundation for the large-scale production of rhLZ in the future.


Asunto(s)
Animales Modificados Genéticamente/genética , Leche/enzimología , Muramidasa/biosíntesis , Proteínas Recombinantes/biosíntesis , Animales , Animales Modificados Genéticamente/metabolismo , Bovinos , Clonación de Organismos , Fermentación , Humanos , Leche/química , Muramidasa/genética , Proteínas Recombinantes/genética
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