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1.
Int J Mol Sci ; 25(18)2024 Sep 16.
Artículo en Inglés | MEDLINE | ID: mdl-39337457

RESUMEN

In recent years, several strategies have been developed for the treatment of transthyretin-related amyloidosis, whose complex clinical manifestations involve cardiomyopathy and polyneuropathy. In view of this, transthyretin stabilizers represent a major cornerstone in treatment thanks to the introduction of tafamidis into therapy and the entry of acoramidis into clinical trials. However, the clinical treatment of transthyretin-related amyloidosis still presents several challenges, urging the development of new and improved therapeutics. Bearing this in mind, in this paper, the most promising among the recently published transthyretin stabilizers were reviewed. Their activity was described to provide some insights into their clinical potential, and crystallographic data were provided to explain their modes of action. Finally, structure-activity relationship studies were performed to give some guidance to future researchers aiming to synthesize new transthyretin stabilizers. Interestingly, some new details emerged with respect to the previously known general rules that guided the design of new compounds.


Asunto(s)
Neuropatías Amiloides Familiares , Prealbúmina , Humanos , Prealbúmina/química , Prealbúmina/metabolismo , Neuropatías Amiloides Familiares/tratamiento farmacológico , Relación Estructura-Actividad , Benzoxazoles/química , Benzoxazoles/uso terapéutico , Animales
2.
Chem Res Toxicol ; 37(10): 1670-1681, 2024 Oct 21.
Artículo en Inglés | MEDLINE | ID: mdl-39258767

RESUMEN

Transthyretin (TTR) is one of the serum binding proteins responsible for transport of thyroid hormones (TH) to target tissue and for maintaining the balance of available TH. Chemical binding to TTR and subsequent displacement of TH has been identified as an end point in screening chemicals for potential disruption of the thyroid system. To address the lack of data regarding chemicals binding to TTR, we optimized an in vitro assay utilizing the fluorescent probe 8-anilino-1-napthalenesulfonic acid (ANSA) and the human protein TTR to screen over 1500 chemicals from the U.S. EPA's ToxCast ph1_v2, ph2, and e1k libraries utilizing a tiered approach. Testing of a single high concentration (target 100 µM) resulted in 888 chemicals with 20% or greater activity based on displacement of ANSA from TTR. Of these, 282 chemicals had activity of 85% or greater and were further tested in 12-point concentration-response with target concentrations ranging from 0.015 to 100 µM. An EC50 was obtained for 276 of these 301 chemicals. To date, this is the largest set of chemicals screened for binding to TTR. Utilization of this assay is a significant contribution toward expanding the suite of in vitro assays used to identify chemicals with the potential to disrupt thyroid hormone homeostasis.


Asunto(s)
Prealbúmina , Bibliotecas de Moléculas Pequeñas , Prealbúmina/metabolismo , Prealbúmina/antagonistas & inhibidores , Prealbúmina/química , Humanos , Bibliotecas de Moléculas Pequeñas/química , Bibliotecas de Moléculas Pequeñas/farmacología , Bibliotecas de Moléculas Pequeñas/metabolismo , Unión Proteica , Naftalenosulfonatos de Anilina/química , Naftalenosulfonatos de Anilina/metabolismo , Colorantes Fluorescentes/química , Estructura Molecular , Sitios de Unión
3.
Proc Natl Acad Sci U S A ; 121(34): e2315007121, 2024 Aug 20.
Artículo en Inglés | MEDLINE | ID: mdl-39133861

RESUMEN

Kinetic stability is thought to be an attribute of proteins that require a long lifetime, such as the transporter of thyroxine and holo retinol-binding protein or transthyretin (TTR) functioning in the bloodstream, cerebrospinal fluid, and vitreous humor. TTR evolved from ancestral enzymes known as TTR-related proteins (TRPs). Here, we develop a rate-expansion approach that allows unfolding rates to be measured directly at low denaturant concentration, revealing that kinetic stability exists in the Escherichia coli TRP (EcTRP), even though the enzyme structure is more energetically frustrated and has a more mutation-sensitive folding mechanism than human TTR. Thus, the ancient tetrameric enzyme may already have been poised to mutate into a kinetically stable human transporter. An extensive mutational study that exchanges residues at key sites within the TTR and EcTRP dimer-dimer interface shows that tyrosine 111, replaced by a threonine in TTR, is the gatekeeper of frustration in EcTRP because it is critical for function. Frustration, virtually absent in TTR, occurs at multiple sites in EcTRP and even cooperatively for certain pairs of mutations. We present evidence that evolution at the C terminus of TTR was a compensatory event to maintain the preexisting kinetic stability while reducing frustration and sensitivity to mutation. We propose an "overcompensation" pathway from EcTRPs to functional hybrids to modern TTRs that is consistent with the biophysics discussed here. An alternative plausible pathway is also presented.


Asunto(s)
Prealbúmina , Prealbúmina/metabolismo , Prealbúmina/química , Prealbúmina/genética , Humanos , Cinética , Desplegamiento Proteico , Escherichia coli/metabolismo , Escherichia coli/genética , Pliegue de Proteína , Modelos Moleculares , Estabilidad Proteica , Mutación , Proteínas de Escherichia coli/metabolismo , Proteínas de Escherichia coli/química , Proteínas de Escherichia coli/genética , Desnaturalización Proteica
4.
ACS Appl Mater Interfaces ; 16(34): 45371-45382, 2024 Aug 28.
Artículo en Inglés | MEDLINE | ID: mdl-39140178

RESUMEN

The self-assembly of proteins and peptides into fibrillar amyloid aggregates is a highly promising route to define the next generation of functional nanomaterials. Amyloid fibrils, traditionally associated with neurodegenerative diseases, offer exceptional conformational and chemical stability and mechanical properties, and resistance to degradation. Here, we report the development of catalytic amyloid nanomaterials through the conjugation of a miniaturized artificial peroxidase (FeMC6*a) to a self-assembling amyloidogenic peptide derived from human transthyretin, TTR(105-115), whose sequence is YTIAALLSPYS. Our synthetic approach relies on fast and selective click ligation upon proper modification of both the peptide and FeMC6*a, leading to TTRLys108@FeMC6*a. Mixing unmodified TTR(105-115) with TTRLys108@FeMC6*a allowed the generation of enzyme-loaded amyloid fibrils, namely, FeMC6*a@fibrils. Catalytic studies, performed in aqueous solution at nearly neutral pH, using ABTS as a model substrate and H2O2 as the oxidizing agent revealed that the enzyme retains its catalytic activity. Moreover, the activity was found to depend on the TTRLys108@FeMC6*a/unmodified TTR(105-115) peptide ratio. In particular, those with the 2:100 ratio showed the highest activity in terms of initial rates and substrate conversion among the screened nanoconjugates and compared to the freely diffusing enzyme. Finally, the newly developed nanomaterials were integrated into a flow system based on a polyvinylidene difluoride membrane filter. Within this flow-reactor, multiple reaction cycles were performed, showcasing the reusability and stability of the catalytic amyloids over extended periods, thus offering significantly improved characteristics compared to the isolated FeMC6*a in the application to a number of practical scenarios.


Asunto(s)
Amiloide , Nanoestructuras , Prealbúmina , Amiloide/química , Nanoestructuras/química , Catálisis , Humanos , Prealbúmina/química , Prealbúmina/metabolismo , Peróxido de Hidrógeno/química , Peroxidasa/química , Peroxidasa/metabolismo , Hemo/química
5.
Protein Sci ; 33(9): e5101, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39149996

RESUMEN

Aberrant formation and deposition of human transthyretin (TTR) aggregates causes transthyretin amyloidosis. To initialize aggregation, transthyretin tetramers must first dissociate into monomers that partially unfold to promote entry into the aggregation pathway. The native TTR tetramer (T) is stabilized by docking of the F87 sidechain into an interfacial cavity enclosed by several hydrophobic residues including A120. We have previously shown that an alternative tetramer (T*) with mispacked F87 sidechains is more prone to dissociation and aggregation than the native T state. However, the molecular basis for the reduced stability in T* remains unclear. Here we report characterization of the A120L mutant, where steric hindrance is introduced into the F87 binding site. The x-ray structure of A120L shows that the F87 sidechain is displaced from its docking site across the subunit interface. In A120S, a naturally occurring pathogenic mutant that is less aggregation-prone than A120L, the F87 sidechain is correctly docked, as in the native TTR tetramer. Nevertheless, 19F-NMR aggregation assays show an elevated population of a monomeric aggregation intermediate in A120S relative to a control containing the native A120, due to accelerated tetramer dissociation and slowed monomer tetramerization. The mispacking of the F87 sidechain is associated with enhanced exchange dynamics for interfacial residues. At 298 K, the T* populations of various naturally occurring mutants fall between 4% and 7% (ΔG ~ 1.5-1.9 kcal/mol), consistent with the free energy change expected for undocking and solvent exposure of one of the four F87 sidechains in the tetramer (ΔG ~ 1.6 kcal/mol). Our data provide a molecular-level picture of the likely universal F87 sidechain mispacking in tetrameric TTR that promotes interfacial conformational dynamics and increases aggregation propensity.


Asunto(s)
Prealbúmina , Prealbúmina/química , Prealbúmina/genética , Prealbúmina/metabolismo , Humanos , Modelos Moleculares , Cristalografía por Rayos X , Conformación Proteica , Multimerización de Proteína , Agregado de Proteínas , Neuropatías Amiloides Familiares/genética , Neuropatías Amiloides Familiares/metabolismo , Sitios de Unión , Sustitución de Aminoácidos
6.
Commun Biol ; 7(1): 905, 2024 Jul 27.
Artículo en Inglés | MEDLINE | ID: mdl-39068302

RESUMEN

ATTR amyloidosis results from the conversion of transthyretin into amyloid fibrils that deposit in tissues causing organ failure and death. This conversion is facilitated by mutations in ATTRv amyloidosis, or aging in ATTRwt amyloidosis. ATTRv amyloidosis exhibits extreme phenotypic variability, whereas ATTRwt amyloidosis presentation is consistent and predictable. Previously, we found unique structural variabilities in cardiac amyloid fibrils from polyneuropathic ATTRv-I84S patients. In contrast, cardiac fibrils from five genotypically different patients with cardiomyopathy or mixed phenotypes are structurally homogeneous. To understand fibril structure's impact on phenotype, it is necessary to study the fibrils from multiple patients sharing genotype and phenotype. Here we show the cryo-electron microscopy structures of fibrils extracted from four cardiomyopathic ATTRwt amyloidosis patients. Our study confirms that they share identical conformations with minimal structural variability, consistent with their homogenous clinical presentation. Our study contributes to the understanding of ATTR amyloidosis biopathology and calls for further studies.


Asunto(s)
Amiloide , Microscopía por Crioelectrón , Miocardio , Humanos , Amiloide/metabolismo , Amiloide/química , Amiloide/ultraestructura , Miocardio/patología , Miocardio/ultraestructura , Prealbúmina/genética , Prealbúmina/metabolismo , Prealbúmina/química , Neuropatías Amiloides Familiares/genética , Neuropatías Amiloides Familiares/patología , Masculino , Femenino , Persona de Mediana Edad , Anciano , Amiloidosis/metabolismo , Amiloidosis/patología , Amiloidosis/genética , Mutación , Cardiomiopatías/genética , Cardiomiopatías/patología , Cardiomiopatías/metabolismo
7.
J Am Soc Mass Spectrom ; 35(8): 1854-1864, 2024 Aug 07.
Artículo en Inglés | MEDLINE | ID: mdl-39057193

RESUMEN

Transthyretin (TTR), a 56 kDa homotetramer that is involved in the transport of thyroxine and retinol, has been linked to amyloidosis through disassembly of tetramers to form monomers, dimers, and trimers that then reassemble into higher order oligomers and/or fibrils. Hybrid TTR (hTTR) tetramers are found in heterozygous individuals that express both wild type TTR (wt-TTR) and mutant TTR (mTTR) forms of the protein, and these states display increased rates of amyloidosis. Here we monitor subunit exchange (SUE) reactions involving homomeric and mixed tetramers using high resolution native mass spectrometry (nMS). Our results show evidence that differences in TTR primary structure alter tetramer stabilities, and hTTR products can form spontaneously by SUE reactions. In addition, we find that solution temperature has strong effects on TTR tetramer stabilities and formation of SUE products. Lower temperatures promote formation of hTTR tetramers containing L55P and V30M subunits, whereas small effects on the formation of hTTR tetramers containing F87A and T119M subunits are observed. We hypothesize that the observed temperature dependent stabilities and subsequent SUE behavior are a result of perturbations to the network of "two kinds of water": hydrating and structure stabilizing water molecules (Spyrakis et al. J. Med. Chem. 2017, 60 (16), 6781-6827; Xu et al. Soft Matter 2012, 8, 324-336) that stabilize wt-TTR and mTTR tetramers. The results presented in this work illustrate the utility of high resolution nMS for studies of the structures, stabilities, and dynamics of protein complexes that directly influence SUE reactions.


Asunto(s)
Prealbúmina , Multimerización de Proteína , Agua , Prealbúmina/química , Prealbúmina/genética , Prealbúmina/metabolismo , Agua/química , Humanos , Estabilidad Proteica , Mutación , Espectrometría de Masas/métodos , Temperatura , Modelos Moleculares
8.
Biomater Sci ; 12(17): 4275-4282, 2024 Aug 20.
Artículo en Inglés | MEDLINE | ID: mdl-39046441

RESUMEN

Amyloid diseases including Alzheimer's, Parkinson's and over 30 others are incurable life-threatening disorders caused by abnormal protein deposition as fibrils in various organs. Cardiac amyloidosis is particularly challenging to diagnose and treat. Identification of the fibril-forming protein, which in the heart is usually amyloid transthyretin (ATTR) or amyloid immunoglobulin light chain (AL), is paramount to treatment. A transformative non-invasive diagnostic modality is imaging using technetium-labeled pyrophosphate or diphosphonate bone tracers, 99mTc-PYP/DPD/HMDP. For unknown reasons, these tracers show preferential uptake by ATTR deposits. The tracer-binding moiety is unknown and potentially involves amyloid fibrils and/or amyloid-associated calcific deposits. We propose that, like in the bone, the tracers chelate to surface-bound Ca2+ in amyloid. In high-affinity protein sites, Ca2+ is coordinated by pairs of acidic residues. To identify such residues on amyloids, we harnessed atomic structures of patient-derived cardiac amyloids determined using cryogenic electron microscopy since 2019. These structures help explain why most but not all ATTR deposits uptake 99mTc-PYP/DPD/HMDP radiotracers, while in AL the opposite is true. Moreover, fibril structures help explain greater microcalcification observed in ATTR vs. AL deposits. These findings may aid the diagnostics and therapeutic targeting of cardiac amyloidosis and are relevant to other amyloids.


Asunto(s)
Amiloide , Humanos , Amiloide/metabolismo , Amiloide/química , Huesos/metabolismo , Huesos/diagnóstico por imagen , Amiloidosis/metabolismo , Amiloidosis/diagnóstico por imagen , Amiloidosis/diagnóstico , Prealbúmina/química , Prealbúmina/metabolismo , Miocardio/metabolismo , Calcio/metabolismo
9.
J Mol Biol ; 436(16): 168673, 2024 Aug 15.
Artículo en Inglés | MEDLINE | ID: mdl-38909653

RESUMEN

The aggregation pathway of transthyretin (TTR) proceeds through rate-limiting dissociation of the tetramer (a dimer of dimers) and partial misfolding of the resulting monomer, which assembles into amyloid structures through a downhill polymerization mechanism. The structural features of the aggregation-prone monomeric intermediate are poorly understood. NMR relaxation dispersion offers a unique opportunity to characterize amyloidogenic intermediates when they exchange on favorable timescales with NMR-visible ground states. Here we use NMR to characterize the structure and conformational dynamics of the monomeric F87E mutant of human TTR. Chemical shifts derived from analysis of multinuclear relaxation dispersion data provide insights into the structure of a low-lying excited state that exchanges with the ground state of the F87E monomer at a rate of 3800 s-1. Disruption of the subunit interfaces of the TTR tetramer leads to destabilization of edge strands in both ß-sheets of the F87E monomer. Conformational fluctuations are propagated through the entire hydrogen bonding network of the DAGH ß-sheet, from the inner ß-strand H, which forms the strong dimer-dimer interface in the TTR tetramer, to outer strand D which is unfolded in TTR fibrils. Fluctuations are also propagated from the AB loop in the weak dimer-dimer interface to the EF helix, which undergoes structural remodeling in fibrils. The conformational fluctuations in both regions are enhanced at acidic pH where amyloid formation is most favorable. The relaxation dispersion data provide insights into the conformational dynamics of the amyloidogenic state of monomeric TTR that predispose it for structural remodeling and progression to amyloid fibrils.


Asunto(s)
Amiloide , Prealbúmina , Conformación Proteica , Prealbúmina/química , Prealbúmina/metabolismo , Prealbúmina/genética , Humanos , Amiloide/química , Amiloide/metabolismo , Multimerización de Proteína , Modelos Moleculares , Enlace de Hidrógeno , Mutación , Resonancia Magnética Nuclear Biomolecular
10.
ChemMedChem ; 19(19): e202400244, 2024 Oct 01.
Artículo en Inglés | MEDLINE | ID: mdl-38863235

RESUMEN

Proteinopathies or amyloidoses are a group of life-threatening disorders that result from misfolding of proteins and aggregation into toxic insoluble amyloid aggregates. Amyloid aggregates have low clearance from the body due to the insoluble nature, leading to their deposition in various organs and consequent organ dysfunction. While amyloid deposition in the central nervous system leads to neurodegenerative diseases that mostly cause dementia and difficulty in movement, several other organs, including heart, liver and kidney are also affected by systemic amyloidoses. Regardless of the site of amyloid deposition, misfolding and structural alteration of the precursor proteins play the central role in amyloid formation. Kinetic stabilizers are an emerging class of drugs, which act like pharmacological chaperones to stabilize the native state structure of amyloidogenic proteins and to increase the activation energy barrier that is required for adopting a misfolded structure or conformation, ultimately leading to the inhibition of protein aggregation. In this review, we discuss the kinetic stabilizers that stabilize the native quaternary structure of transthyretin, immunoglobulin light chain and superoxide dismutase 1 that cause transthyretin amyloidoses, light chain amyloidosis and familial amyotrophic lateral sclerosis, respectively.


Asunto(s)
Proteínas Amiloidogénicas , Humanos , Cinética , Proteínas Amiloidogénicas/metabolismo , Proteínas Amiloidogénicas/antagonistas & inhibidores , Proteínas Amiloidogénicas/química , Agregado de Proteínas/efectos de los fármacos , Superóxido Dismutasa-1/metabolismo , Superóxido Dismutasa-1/química , Superóxido Dismutasa-1/antagonistas & inhibidores , Prealbúmina/metabolismo , Prealbúmina/química , Prealbúmina/antagonistas & inhibidores , Amiloidosis/tratamiento farmacológico , Amiloidosis/metabolismo , Relevancia Clínica
11.
J Biol Chem ; 300(8): 107495, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38925327

RESUMEN

Transthyretin (TTR) is an homotetrameric protein involved in the transport of thyroxine. More than 150 different mutations have been described in the TTR gene, several of them associated with familial amyloid cardiomyopathy. Recently, our group described a new variant of TTR in Brazil, namely A39D-TTR, which causes a severe cardiac condition. Position 39 is in the AB loop, a region of the protein that is located within the thyroxine-binding channels and is involved in tetramer formation. In the present study, we solved the structure and characterize the thermodynamic stability of this new variant of TTR using urea and high hydrostatic pressure. Interestingly, during the process of purification, A39D-TTR turned out to be a dimer and not a tetramer, a variation that might be explained by the close contact of the four aspartic acids at position 39, where they face each other inside the thyroxine channel. In the presence of subdenaturing concentrations of urea, bis-ANS binding and dynamic light scattering revealed A39D-TTR in the form of a molten-globule dimer. Co-expression of A39D and WT isoforms in the same bacterial cell did not produce heterodimers or heterotetramers, suggesting that somehow a negative charge at the AB loop precludes tetramer formation. A39D-TTR proved to be highly amyloidogenic, even at mildly acidic pH values where WT-TTR does not aggregate. Interestingly, despite being a dimer, aggregation of A39D-TTR was inhibited by diclofenac, which binds to the thyroxine channel in the tetramer, suggesting the existence of other pockets in A39D-TTR able to accommodate this molecule.


Asunto(s)
Cardiomiopatías , Prealbúmina , Multimerización de Proteína , Termodinámica , Prealbúmina/genética , Prealbúmina/química , Prealbúmina/metabolismo , Humanos , Cardiomiopatías/metabolismo , Cardiomiopatías/genética , Tiroxina/metabolismo , Tiroxina/química , Mutación Missense , Amiloide/metabolismo , Amiloide/química , Amiloide/genética , Sustitución de Aminoácidos , Urea/química , Urea/metabolismo
12.
Arch Toxicol ; 98(9): 3035-3047, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-38884658

RESUMEN

Per- and poly-fluorinated compounds constitute a wide group of fluorocarbon chemicals with widespread industrial applications, ranging from non-stick coating in cookware to water surfactants, from fire-fighting foams to water-repellent coatings on textiles. Presently, over 12,000 PFAS are known worldwide. In recent years, extensive research has focused on investigating the biological effects of these molecules on various organisms, including humans. Here, we conducted in silico simulations to examine the potential binding of a representative selection of PFAS to various human proteins known to be involved in chemical transportation and accumulation processes. Specifically, we targeted human serum albumin (HSA), transthyretin (TTR), thyroxine binding protein (TBG), fatty acid binding proteins (FABPs), organic anion transporters (OATs), aiming to assess the potential for bioaccumulation. Molecular docking simulations were employed for this purpose, supplemented by molecular dynamics (MD) simulations to account for protein flexibility, when necessary. Our findings indicate that so-called "legacy PFAS" such as PFOA or PFOS exhibit a higher propensity for interaction with the analysed human protein targets compared to newly formulated PFAS, characterised by higher branching and hydrophilicity, and possibly a higher accumulation in the human body.


Asunto(s)
Simulación por Computador , Fluorocarburos , Simulación del Acoplamiento Molecular , Simulación de Dinámica Molecular , Humanos , Fluorocarburos/química , Prealbúmina/metabolismo , Prealbúmina/química , Albúmina Sérica Humana/química , Albúmina Sérica Humana/metabolismo , Unión Proteica , Contaminantes Ambientales/química , Contaminantes Ambientales/toxicidad , Contaminantes Ambientales/metabolismo
13.
PLoS One ; 19(6): e0304891, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38843135

RESUMEN

ATTR amyloidosis is caused by deposition of large, insoluble aggregates (amyloid fibrils) of cross-ß-sheet TTR protein molecules on the intercellular surfaces of tissues. The process of amyloid formation from monomeric TTR protein molecules to amyloid deposits has not been fully characterized and is therefore modeled in this paper. Two models are considered: 1) TTR monomers in the blood spontaneously fold into a ß-sheet conformation, aggregate into short proto-fibrils that then circulate in the blood until they find a complementary tissue where the proto-fibrils accumulate to form the large, insoluble amyloid fibrils found in affected tissues. 2) TTR monomers in the native or ß-sheet conformation circulate in the blood until they find a tissue binding site and deposit in the tissue or tissues forming amyloid deposits in situ. These models only differ on where the selection for ß-sheet complementarity occurs, in the blood where wt-wt, wt-v, and v-v interactions determine selectivity, or on the tissue surface where tissue-wt and tissure-v interactions also determine selectivity. Statistical modeling in both cases thus involves selectivity in fibril aggregation and tissue binding. Because binding of protein molecules into fibrils and binding of fibrils to tissues occurs through multiple weak non-covalent bonds, strong complementarity between ß-sheet molecules and between fibrils and tissues is required to explain the insolubility and tissue selectivity of ATTR amyloidosis. Observation of differing tissue selectivity and thence disease phenotypes from either pure wildtype TTR protein or a mix of wildtype and variant molecules in amyloid fibrils evidences the requirement for fibril-tissue complementarity. Understanding the process that forms fibrils and binds fibrils to tissues may lead to new possibilities for interrupting the process and preventing or curing ATTR amyloidosis.


Asunto(s)
Amiloide , Prealbúmina , Prealbúmina/metabolismo , Prealbúmina/química , Humanos , Amiloide/metabolismo , Amiloide/química , Neuropatías Amiloides Familiares/metabolismo , Neuropatías Amiloides Familiares/patología , Amiloidosis/metabolismo , Modelos Moleculares , Conformación Proteica en Lámina beta
14.
Amyloid ; 31(3): 184-194, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-38801321

RESUMEN

BACKGROUND: Numerous studies suggest a progressive accumulation of post-translationally modified peptides within amyloid fibrils, including isoaspartate (isoD) modifications. Here, we generated and characterised novel monoclonal antibodies targeting isoD-modified transthyretin (TTR). The antibodies were used to investigate the presence of isoD-modified TTR in deposits from transthyretin amyloidosis patients and to mediate antibody-dependent phagocytosis of TTR fibrils. METHODS: Monoclonal antibodies were generated by immunisation of mice using an isoD-modified peptide and subsequent hybridoma generation. The antibodies were characterised in terms of affinity and specificity to isoD-modified TTR using surface plasmon resonance, transmission electron microscopy and immunohistochemical staining of human cardiac tissue. The potential to elicit antibody-dependent phagocytosis of TTR fibrils was assessed using THP-1 cells. RESULTS: We developed two mouse monoclonal antibodies, 2F2 and 4D4, with high nanomolar affinity for isoD-modified TTR and strong selectivity over the unmodified epitope. Both antibodies show presence of isoD-modified TTR in human cardiac tissue, but not in freshly purified recombinant TTR, suggesting isoD modification only present in aged fibrillar deposits. Likewise, the antibodies only facilitated phagocytosis of TTR fibrils and not TTR monomers by THP-1 cells. CONCLUSIONS: These antibodies label aged, non-native TTR deposits, leaving native TTR unattended and thereby potentially enabling new therapeutic approaches.


Asunto(s)
Neuropatías Amiloides Familiares , Anticuerpos Monoclonales , Inmunoterapia , Prealbúmina , Prealbúmina/inmunología , Prealbúmina/metabolismo , Prealbúmina/química , Humanos , Animales , Neuropatías Amiloides Familiares/inmunología , Neuropatías Amiloides Familiares/patología , Neuropatías Amiloides Familiares/metabolismo , Neuropatías Amiloides Familiares/terapia , Ratones , Anticuerpos Monoclonales/inmunología , Inmunoterapia/métodos , Amiloide/metabolismo , Amiloide/inmunología , Fagocitosis/inmunología , Células THP-1 , Femenino , Procesamiento Proteico-Postraduccional
15.
Biochim Biophys Acta Proteins Proteom ; 1872(5): 141027, 2024 Sep 01.
Artículo en Inglés | MEDLINE | ID: mdl-38796131

RESUMEN

Misfolding and aggregation of transthyretin (TTR) is associated with numerous ATTR amyloidosis. TTR aggregates extracted from ATTR patients consist of not only full-length TTR, but also N-terminally truncated TTR fragments that can be produced by proteolytic cleavage, suggesting the presence of multiple misfolding pathways. Here, we report mechanistic studies of an early stage of TTR aggregation to probe the oligomerization process for the full-length as well as N-terminally truncated TTR. Our kinetic analyses using size exclusion chromatography revealed that amyloidogenic monomers dissociated from wild-type (WT) as well as pathogenic variants (V30M and L55P) form misfolded dimers, which self-assemble into oligomers, precursors of fibril formation. Dimeric interfaces in the full-length misfolded oligomers were investigated by examining the effect of single-point mutations on the two ß-strands (F and H). The single-point mutations on the two ß-strands (E92P on strand F and T119W on strand H) inhibited the dimerization of misfolded monomers, while the TTR variants can still form native dimers through the same F and H strands. These results suggest that the two strands are involved in intermolecular associations for both native and misfolded dimers, but detailed intermolecular interactions are different in the two forms of dimers. In the presence of a proteolytic enzyme, TTR aggregation is greatly accelerated. The two mutations on the two ß-strands, however, inhibited TTR aggregation even in the presence of a proteolytic enzyme, trypsin. These results suggest that the two ß-strands (F and H) play a critical role in aggregation of the N-terminally truncated TTR as well.


Asunto(s)
Prealbúmina , Pliegue de Proteína , Multimerización de Proteína , Prealbúmina/química , Prealbúmina/genética , Prealbúmina/metabolismo , Humanos , Mutación Puntual , Cinética , Neuropatías Amiloides Familiares/metabolismo , Neuropatías Amiloides Familiares/genética , Amiloide/química , Amiloide/metabolismo
16.
J Phys Chem Lett ; 15(17): 4761-4766, 2024 May 02.
Artículo en Inglés | MEDLINE | ID: mdl-38661515

RESUMEN

Heart tissue can experience a progressive accumulation of transthyretin (TTR), a small four subunit protein that transports holoretinol binding protein and thyroxine. This severe pathology is known as transthyretin amyloid cardiomyopathy. Numerous experimental studies indicated that the aggregation rate and toxicity of TTR fibrils could be altered by the presence of lipids; however, the role of plasmalogens in this process remains unknown. In this study, we investigate the effect of choline plasmalogens (CPs) with different lengths and saturations of fatty acids (FAs) on TTR aggregation. We found that CPs with saturated and unsaturated FAs strongly suppressed TTR aggregation. We also found that CPs with saturated FAs did not change the morphology of TTR fibrils; however, much thicker fibrillar species were formed in the presence of CPs with unsaturated FAs. Finally, we found that CPs with C16:0, C18:0, and C18:1 FAs substantially lowered the cytotoxicity of TTR fibrils that were formed in their presence.


Asunto(s)
Plasmalógenos , Prealbúmina , Prealbúmina/química , Prealbúmina/metabolismo , Plasmalógenos/metabolismo , Plasmalógenos/química , Humanos , Amiloide/química , Amiloide/metabolismo , Agregado de Proteínas/efectos de los fármacos , Ácidos Grasos/química , Ácidos Grasos/metabolismo
17.
J Hazard Mater ; 471: 134240, 2024 Jun 05.
Artículo en Inglés | MEDLINE | ID: mdl-38678700

RESUMEN

Surface and treated wastewater are contaminated with highly complex mixtures of micropollutants, which may cause numerous adverse effects, often mediated by endocrine disruption. However, there is limited knowledge regarding some important modes of action, such as interference with thyroid hormone (TH) regulation, and the compounds driving these effects. This study describes an effective approach for the identification of compounds with the potential to bind to transthyretin (TTR; protein distributing TH to target tissues), based on their specific separation in a pull-down assay followed by non-target analysis (NTA). The method was optimized with known TTR ligands and applied to complex water samples. The specific separation of TTR ligands provided a substantial reduction of chromatographic features from the original samples. The applied NTA workflow resulted in the identification of 34 structures. Twelve compounds with available standards were quantified in the original extracts and their TH-displacement potency was confirmed. Eleven compounds were discovered as TTR binders for the first time and linear alkylbenzene sulfonates (LAS) were highlighted as contaminants of concern. Pull-down assay combined with NTA proved to be a well-functioning approach for the identification of unknown bioactive compounds in complex mixtures with great application potential across various biological targets and environmental compartments.


Asunto(s)
Disruptores Endocrinos , Prealbúmina , Contaminantes Químicos del Agua , Prealbúmina/química , Prealbúmina/metabolismo , Prealbúmina/análisis , Disruptores Endocrinos/química , Disruptores Endocrinos/análisis , Contaminantes Químicos del Agua/análisis , Contaminantes Químicos del Agua/química , Ligandos , Espectrometría de Masas/métodos , Aguas Residuales/química
18.
Nat Chem Biol ; 20(8): 981-990, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38503834

RESUMEN

Segments of proteins with high ß-strand propensity can self-associate to form amyloid fibrils implicated in many diseases. We describe a general approach to bind such segments in ß-strand and ß-hairpin conformations using de novo designed scaffolds that contain deep peptide-binding clefts. The designs bind their cognate peptides in vitro with nanomolar affinities. The crystal structure of a designed protein-peptide complex is close to the design model, and NMR characterization reveals how the peptide-binding cleft is protected in the apo state. We use the approach to design binders to the amyloid-forming proteins transthyretin, tau, serum amyloid A1 and amyloid ß1-42 (Aß42). The Aß binders block the assembly of Aß fibrils as effectively as the most potent of the clinically tested antibodies to date and protect cells from toxic Aß42 species.


Asunto(s)
Péptidos beta-Amiloides , Humanos , Péptidos beta-Amiloides/química , Péptidos beta-Amiloides/metabolismo , Unión Proteica , Péptidos/química , Péptidos/farmacología , Amiloide/química , Amiloide/metabolismo , Modelos Moleculares , Fragmentos de Péptidos/química , Fragmentos de Péptidos/metabolismo , Diseño de Fármacos , Proteínas Amiloidogénicas/química , Proteínas Amiloidogénicas/metabolismo , Proteínas tau/metabolismo , Proteínas tau/química , Prealbúmina/química , Prealbúmina/metabolismo , Secuencia de Aminoácidos
19.
Nat Commun ; 15(1): 581, 2024 Jan 17.
Artículo en Inglés | MEDLINE | ID: mdl-38233397

RESUMEN

ATTR amyloidosis is caused by the deposition of transthyretin in the form of amyloid fibrils in virtually every organ of the body, including the heart. This systemic deposition leads to a phenotypic variability that has not been molecularly explained yet. In brain amyloid conditions, previous studies suggest an association between clinical phenotype and the molecular structures of their amyloid fibrils. Here we investigate whether there is such an association in ATTRv amyloidosis patients carrying the mutation I84S. Using cryo-electron microscopy, we determined the structures of cardiac fibrils extracted from three ATTR amyloidosis patients carrying the ATTRv-I84S mutation, associated with a consistent clinical phenotype. We found that in each ATTRv-I84S patient, the cardiac fibrils exhibited different local conformations, and these variations can co-exist within the same fibril. Our finding suggests that one amyloid disease may associate with multiple fibril structures in systemic amyloidoses, calling for further studies.


Asunto(s)
Neuropatías Amiloides Familiares , Encefalopatías , Humanos , Amiloide/química , Neuropatías Amiloides Familiares/genética , Microscopía por Crioelectrón , Prealbúmina/genética , Prealbúmina/química , Corazón
20.
FEBS J ; 291(8): 1732-1743, 2024 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-38273457

RESUMEN

Amyloid fibrils of transthyretin (TTR) consist of full-length TTR and C-terminal fragments starting near residue 50. However, the molecular mechanism underlying the production of the C-terminal fragment remains unclear. Here, we investigated trypsin-induced aggregation and urea-induced unfolding of TTR variants associated with hereditary amyloidosis. Trypsin strongly induced aggregation of variants V30G and V30A, in each of which Val30 in the hydrophobic core of the monomer was mutated to less-bulky amino acids. Variants V30L and V30M, in each of which Val30 was mutated to bulky amino acids, also exhibited trypsin-induced aggregation. On the other hand, pathogenic variant I68L as well as the nonpathogenic V30I did not exhibit trypsin-induced aggregation. The V30G variant was extremely unstable compared with the other variants. The V30G mutation caused the formation of a cavity and the rearrangement of Leu55 in the hydrophobic core of the monomer. These results suggest that highly destabilized transthyretin variants are more susceptible to trypsin digestion.


Asunto(s)
Amiloidosis Familiar , Valina , Humanos , Tripsina/genética , Tripsina/metabolismo , Valina/genética , Prealbúmina/química , Amiloide/química , Amiloidosis Familiar/genética
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