RESUMEN
BACKGROUND: Castor is an important industrial raw material. Drought-induced oxidative stress leads to slow growth and decreased yields in castor. However, the mechanisms of drought-induced oxidative stress in castor remain unclear. Therefore, in this study, physiological, biochemical, and RNA-seq analyses were conducted on the roots of castor plants under PEG-6000 stress for 3 d and 7 d followed by 4 d of hydration. RESULTS: The photosynthetic rate of castor leaves was inhibited under PEG-6000 stress for 3 and 7 d. Biochemical analysis of castor roots stressed for 3 d and 7 d, and rehydrated for 4 d revealed that the activities of APX and CAT were highest after only 3 d of stress, whereas the activities of POD, GR, and SOD peaked after 7 d of stress. RNA-seq analysis revealed 2926, 1507, and 111 differentially expressed genes (DEGs) in the roots of castor plants under PEG-6000 stress for 3 d and 7 d and after 4 d of rehydration, respectively. GO analysis of the DEGs indicated significant enrichment in antioxidant activity. Furthermore, KEGG enrichment analysis of the DEGs revealed significantly enriched metabolic pathways, including glutathione metabolism, fatty acid metabolism, and plant hormone signal transduction. WGCNA identified the core genes PP2C39 and GA2ox4 in the navajowhite1 module, which was upregulated under PEG-6000 stress. On the basis of these results, we propose a model for the response to drought-induced oxidative stress in castor. CONCLUSIONS: This study provides valuable antioxidant gene resources, deepening our understanding of antioxidant regulation and paving the way for further molecular breeding of castor plants.
Asunto(s)
Estrés Oxidativo , Polietilenglicoles , Transcriptoma , Polietilenglicoles/farmacología , Raíces de Plantas/genética , Raíces de Plantas/metabolismo , Raíces de Plantas/efectos de los fármacos , Ricinus/genética , Ricinus/fisiología , Ricinus/metabolismo , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Sequías , Ricinus communis/genética , Ricinus communis/metabolismo , Antioxidantes/metabolismo , Fotosíntesis/efectos de los fármacos , Hojas de la Planta/genética , Hojas de la Planta/metabolismo , Hojas de la Planta/efectos de los fármacos , Perfilación de la Expresión GénicaRESUMEN
Castor (Ricinus communis L.) is an importance crop cultivated for its oil and economic value. Seed size is a crucial factor that determines crop yield. Gaining insight into the molecular regulatory processes of seed development is essential for the genetic enhancement and molecular breeding of castor. Here, we successfully fine-mapped a major QTL related to seed size, qSS3, to a 180â kb interval on chromosome 03 using F2 populations (DL01×WH11). A 17.6-kb structural variation (SV) was detected through genomic comparison between DL01 and WH11. Analysis of haplotypes showed that the existence of the complete 17.6â kb structural variant may lead to the small seed characteristic in castor. In addition, we found that qSS3 contains the microRNA396b (miR396b) sequence, which is situated within the 17.6â kb SV. The results of our experiment offer additional evidence that miR396-Growth Regulating Factor 4 (GRF4) controls seed size by impacting the growth and multiplication of seed coat and endosperm cells. Furthermore, we found that RcGRF4 activates the expression of YUCCA6 (YUC6), facilitating the production of IAA in seeds and thereby impacting the growth of castor seeds. Our research has discovered a crucial functional module that controls seed size, offering a fresh understanding of the mechanism underlying seed size regulation in castor.
Asunto(s)
Regulación de la Expresión Génica de las Plantas , Ácidos Indolacéticos , MicroARNs , Semillas , MicroARNs/genética , MicroARNs/metabolismo , Semillas/genética , Semillas/crecimiento & desarrollo , Semillas/metabolismo , Ácidos Indolacéticos/metabolismo , Sitios de Carácter Cuantitativo/genética , Ricinus communis/genética , Ricinus communis/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Ricinus/genética , Ricinus/metabolismo , Ricinus/crecimiento & desarrollo , ARN de Planta/genética , ARN de Planta/metabolismoRESUMEN
Genomic imprinting refers to parent-of-origin-dependent gene expression and primarily occurs in the endosperm of flowering plants, but its functions and epigenetic mechanisms remain to be elucidated in eudicots. Castor bean, a eudicot with large and persistent endosperm, provides an excellent system for studying the imprinting. Here, we identified 131 imprinted genes in developing endosperms and endosperm at seed germination phase of castor bean, involving into the endosperm development, accumulation of storage compounds and specially seed germination. Our results showed that the transcriptional repression of maternal allele of DNA METHYLTRANSFERASE 1 (MET1) may be required for maternal genome demethylation in the endosperm. DNA methylation analysis showed that only a small fraction of imprinted genes was associated with allele-specific DNA methylation, and most of them were closely associated with constitutively unmethylated regions (UMRs), suggesting a limited role for DNA methylation in controlling genomic imprinting. Instead, histone modifications can be asymmetrically deposited in maternal and paternal genomes in a DNA methylation-independent manner to control expression of most imprinted genes. These results expanded our understanding of the occurrence and biological functions of imprinted genes and showed the evolutionary flexibility of the imprinting machinery and mechanisms in plants.
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Proteínas de Arabidopsis , Arabidopsis , Ricinus communis , Endospermo/genética , Endospermo/metabolismo , Ricinus communis/genética , Ricinus communis/metabolismo , Arabidopsis/genética , Epigénesis Genética , Impresión Genómica , Metilación de ADN/genética , Semillas/metabolismo , Alelos , Regulación de la Expresión Génica de las Plantas , ADN (Citosina-5-)-Metiltransferasas/genética , Proteínas de Arabidopsis/metabolismoRESUMEN
Castor bean (Ricinus communis L.) can withstand long periods of water deficit and high temperatures, and therefore has been recognized as a drought-resistant plant species, allowing the study of gene networks involved in drought response and tolerance. The identification of genes networks related to drought response in this plant may yield important information in the characterization of molecular mechanisms correlating changes in the gene expression with the physiological adaptation processes. In this context, gene families related to abscisic acid (ABA) signaling play a crucial role in developmental and environmental adaptation processes of plants to drought stress. However, the families that function as the core components of ABA signaling, as well as genes networks related to drought response, are not well understood in castor bean. In this study 7 RcPYL, 63 RcPP2C, and 6 RcSnRK2 genes were identified in castor bean genome, which was further supported by chromosomal distribution, gene structure, evolutionary relationships, and conserved motif analyses. The castor bean general expression profile was investigated by RNAseq in root and leaf tissues in response to drought stress. These analyses allowed the identification of genes differentially expressed, including genes from the ABA signaling core, genes related to photosynthesis, cell wall, energy transduction, antioxidant response, and transcription factors. These analyses provide new insights into the core components of ABA signaling in castor bean, allow the identification of several molecular responses associated with the high physiological adaptation of castor bean to drought stress, and contribute to the identification of candidate genes for genetic improvement.
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Ricinus communis , Ricinus communis/genética , Ricinus communis/metabolismo , Ricinus/genética , Ricinus/metabolismo , Redes Reguladoras de Genes , Sequías , Perfilación de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Transcriptoma , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Ácido Abscísico/metabolismoRESUMEN
Castor (Ricinus communis L.) is a dicotyledonous oilseed crop that can have either spineless or spiny capsules. Spines are protuberant structures that differ from thorns or prickles. The developmental regulatory mechanisms governing spine formation in castor or other plants have remained largely unknown. Herein, using map-based cloning in 2 independent F2 populations, F2-LYY5/DL01 and F2-LYY9/DL01, we identified the RcMYB106 (myb domain protein 106) transcription factor as a key regulator of capsule spine development in castor. Haplotype analyses demonstrated that either a 4,353-bp deletion in the promoter or a single nucleotide polymorphism leading to a premature stop codon in the RcMYB106 gene could cause the spineless capsule phenotype in castor. Results of our experiments indicated that RcMYB106 might target the downstream gene RcWIN1 (WAX INDUCER1), which encodes an ethylene response factor known to be involved in trichome formation in Arabidopsis (Arabidopsis thaliana) to control capsule spine development in castor. This hypothesis, however, remains to be further tested. Nevertheless, our study reveals a potential molecular regulatory mechanism underlying the spine capsule trait in a nonmodel plant species.
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Aceite de Ricino , Ricinus communis , Aceite de Ricino/metabolismo , Ricinus/genética , Ricinus/metabolismo , Regulación de la Expresión Génica de las Plantas , Ricinus communis/genética , Ricinus communis/metabolismoRESUMEN
The rise in oil prices, global warming, and the depletion of nonrenewable resources have led researchers to study sustainable alternatives to increasing energy demand. The autocatalysis from castor oil and castor lipases to produce biodiesel can be an excellent alternative to reduce the production costs and avoid the drawbacks of chemical transesterification. This study aimed to evaluate the catalytic activity of castor bean lipase extract (CBLE) on three vegetable oils hydrolysis, to obtain and enhance biodiesel yield by an autocatalysis from castor oil and CBLE. Furthermore, the enzymatic biodiesel physicochemical quality was analyzed. The enzymatic activity for olive oil was 76.12 U, 90.06 U for commercial castor oil, and 75.60 U in raw castor oil. The hydrolysis percentages were high at 25 °C, pH 4.5, for 4 h with 97.18% for olive oil, 98.86%, and 96.19% for commercial and raw castor oil, respectively. The CBLE catalyzed the transesterification reaction on castor oil to obtain 82.91% biodiesel yield under the selected conditions of 20% lipase loading, 1:6 oil/methanol molar ratio, and 10% buffer pH 4.5, 37 °C for 8 h. The castor biodiesel quality satisfied the ASTM-D6751 (USA) and EN-14214 (European Union) values, except for the density, viscosity, and moisture, as expected for this kind of biodiesel.
Asunto(s)
Aceite de Ricino , Ricinus communis , Ricinus communis/metabolismo , Biocombustibles/análisis , Lipasa/metabolismo , Aceite de Oliva , Aceites de Plantas , Esterificación , Catálisis , Extractos VegetalesRESUMEN
BACKGROUND: Understanding the processes governing angiosperm seed growth and development is essential both for fundamental plant biology and for agronomic purposes. Master regulators of angiosperm seed development are expressed in a seed-specific manner. However, it is unclear how this seed specificity of transcription is established. In some vertebrates, DNA methylation valleys (DMVs) are highly conserved and strongly associated with key developmental genes, but comparable studies in plants are limited to Arabidopsis and soybean. Castor bean (Ricinus communis) is a valuable model system for the study of seed biology in dicots and source of economically important castor oil. Unlike other dicots such as Arabidopsis and soybean, castor bean seeds have a relatively large and persistent endosperm throughout seed development, representing substantial structural differences in mature seeds. Here, we performed an integrated analysis of RNA-seq, whole-genome bisulfite sequencing, and ChIP-seq for various histone marks in the castor bean. RESULTS: We present a gene expression atlas covering 16 representative tissues and identified 1162 seed-specific genes in castor bean (Ricinus communis), a valuable model for the study of seed biology in dicots. Upon whole-genome DNA methylation analyses, we detected 32,567 DMVs across five tissues, covering ~33% of the castor bean genome. These DMVs are highly hypomethylated during development and conserved across plant species. We found that DMVs have the potential to activate transcription, especially that of tissue-specific genes. Focusing on seed development, we found that many key developmental regulators of seed/endosperm development, including AGL61, AGL62, LEC1, LEC2, ABI3, and WRI1, were located within DMVs. ChIP-seq for five histone modifications in leaves and seeds clearly showed that the vast majority of histone modification peaks were enriched within DMVs, and their remodeling within DMVs has a critical role in the regulation of seed-specific gene expression. Importantly, further experiment analysis revealed that distal DMVs may act as cis-regulatory elements, like enhancers, to activate downstream gene expression. CONCLUSIONS: Our results point to the importance of DMVs and special distal DMVs behaving like enhancers, in the regulation of seed-specific genes, via the reprogramming of histone modifications within DMVs. Furthermore, these results provide a comprehensive understanding of the epigenetic regulator roles in seed development in castor bean and other important crops.
Asunto(s)
Arabidopsis , Ricinus communis , Animales , Arabidopsis/genética , Ricinus communis/genética , Ricinus communis/metabolismo , Metilación de ADN , Epigénesis Genética , Expresión Génica , Regulación de la Expresión Génica de las Plantas , Semillas/genética , Glycine max/genéticaRESUMEN
Phosphoenolpyruvate carboxylase (PEPC) is a tightly regulated enzyme that plays a crucial anaplerotic role in central plant metabolism. Bacterial-type PEPC (BTPC) of developing castor oil seeds (COS) is highly expressed as a catalytic and regulatory subunit of a novel Class-2 PEPC heteromeric complex. Ricinus communis Ca2+-dependent protein kinase-1 (RcCDPK1) catalyzes in vivo inhibitory phosphorylation of COS BTPC at Ser451. Autokinase activity of recombinant RcCDPK1 was detected and 42 autophosphorylated Ser, Thr or Tyr residues were mapped via liquid chromatography-tandem mass spectrometry. Prior autophosphorylation markedly attenuated the ability of RcCDPK1 to transphosphorylate its BTPC substrate at Ser451. However, fully dephosphorylated RcCDPK1 rapidly autophosphorylated during the initial stages of a BTPC transphosphorylation assay. This suggests that Ca2+-dependent binding of dephospho-RcCDPK1 to BTPC may trigger a structural change that leads to rapid autophosphorylation and subsequent substrate transphosphorylation. Tyr30 was identified as an autophosphorylation site via LC-MS/MS and immunoblotting with a phosphosite-specific antibody. Tyr30 occurs at the junction of RcCDPK1's N-terminal variable (NTVD) and catalytic domains and is widely conserved in plant and protist CDPKs. Interestingly, a reduced rate and extent of BTPC transphosphorylation occurred with a RcCDPK1Y30F mutant. Prior research demonstrated that RcCDPK1's NTVD is essential for its Ca2+-dependent autophosphorylation or BTPC transphosphorylation activities but plays no role in target recognition. We propose that Tyr30 autophosphorylation facilitates a Ca2+-dependent interaction between the NTVD and Ca2+-activation domain that primes RcCDPK1 for transphosphorylating BTPC at Ser451. Our results provide insights into links between the post-translational control of COS anaplerosis, Ca2+-dependent signaling and the biological significance of RcCDPK1 autophosphorylation.
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Fosfoenolpiruvato Carboxilasa , Ricinus communis , Bacterias/metabolismo , Calcio/metabolismo , Ricinus communis/metabolismo , Aceite de Ricino/metabolismo , Cromatografía Liquida , Fosfoenolpiruvato Carboxilasa/metabolismo , Fosforilación , Proteínas Quinasas/metabolismo , Ricinus/metabolismo , Semillas/metabolismo , Espectrometría de Masas en TándemRESUMEN
Chelating agents have been considered as an important phytoremediation strategy to enhance heavy metal extraction from contaminated soil. A pot experiment was conducted to explore the effects of low molecular weight organic acids (LMWOAs) on the phytoremediation efficiency of copper (Cu) by castor bean, and soil enzyme activities. Results indicated that the addition of all the three kinds of LMWOAs (citric, tartaric, oxalic acids) did not decrease the biomass of castor bean, despite the fact they reduced the concentration of chlorophyll-a in leaves compared to the control. The Cu concentrations in the roots and shoots significantly increased by 6-106% and 5-148%, respectively, in the LMWOAs treatments so that the total accumulation of Cu by whole plants in all the LMWOAs treatments increased by 21-189% in comparison with the control. The values of the translocation factor (TF) and bio-concentration factor (BCF) of Cu in castor bean also rose following the addition of LMWOAs, indicating that the LMWOAs enhanced the uptake and transportation of Cu. Moreover, the application of LMWOAs did not significantly change the soil pH but significantly increased the activity of soil enzymes (urease, catalase, and alkaline phosphatase). The addition of exogenous LMWOAs increased the available Cu significantly in the soil, thus promoted the phytoextraction efficiency of Cu by castor bean. These results will provide some new insights into the practical use of LMWOAs for the phytoremediation of heavy-metal-contaminated soil employing castor bean.
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Bioacumulación , Quelantes/química , Cobre/metabolismo , Compuestos Orgánicos/química , Ricinus communis/metabolismo , Contaminantes del Suelo/metabolismo , Suelo/química , Ácidos/administración & dosificación , Ácidos/química , Biodegradación Ambiental , Ricinus communis/efectos de los fármacos , Quelantes/administración & dosificación , Peso Molecular , Compuestos Orgánicos/administración & dosificaciónRESUMEN
Castor oil contains approximately 90% ricinoleic acid (RA) which is stored mainly in the form of tri-ricinoleic acid containing triacylglycerols (TAG). Ricinoleate is synthesized from oleate (18:1n-9) esterified to the sn-2 position of phosphatidylcholine (PtdCho) catalyzed by oleoyl-12-hydroxylase. PtdCho-derived diacylglycerol (DAG) is an important substrate pool for TAG synthesis, and the interconversion between PtdCho and DAG has been shown to play a critical role in channeling hydroxy fatty acids (HFA) to TAG. Although phospholipase D (PLD) has been reported to catalyze the hydrolysis of PtdCho to produce phosphatidic acid which can then be converted to DAG, its potential functions in the channeling of RA from PtdCho to DAG and the assembly of RA on TAG is largely unknown. In the present study, 11 PLD genes were identified from the Castor Bean Genome Database. Gene expression analysis indicated that RcPLD9 is expressed at relatively high levels in developing seeds compared to other plant tissues. Sequence and phylogenetic analyses revealed that RcPLD9 is a homolog of Arabidopsis PLDζ2. Overexpression of RcPLD9 in the Arabidopsis CL7 line producing C18-HFA resulted in RA content reductions in the polar lipid fraction (mainly PtdCho) and mono-HFA-TAG, but increased RA content in di-HFA-TAG. Since part of RA in di-HFA-TAG is derived from HFA-DAG, the results indicated that RcPLD9 facilitates the channeling of RA from PtdCho to DAG for its assembly on TAG in developing seeds.
Asunto(s)
Proteínas de Arabidopsis/genética , Fosfolipasa D/genética , Ácidos Ricinoleicos/metabolismo , Ricinus communis/genética , Triglicéridos/metabolismo , Arabidopsis/genética , Ricinus communis/metabolismo , Aceite de Ricino/química , Aceite de Ricino/genética , Aceite de Ricino/metabolismo , Endospermo/genética , Endospermo/metabolismo , Ácidos Grasos/genética , Ácidos Grasos/metabolismo , Plantas Modificadas Genéticamente/genética , Plantas Modificadas Genéticamente/metabolismo , Ácidos Ricinoleicos/química , Semillas/genética , Semillas/metabolismo , Triglicéridos/genéticaRESUMEN
Soil salinity is a major source of abiotic plant stress, adversely affecting plant growth, development and productivity. Although the physiological and molecular mechanisms that underlie plant responses to salt stress are becoming increasingly understood, epigenetic modifications, such as histone methylations and their potential regulation of the transcription of masked genes at the genome level in response to salt stress, remain largely unclear. Castor bean, an important nonedible oil crop, has evolved the capacity to grow under salt stress. Here, based on high-throughput RNA-seq and ChIP-seq data, we systematically investigated changes in genomic transcription and histone methylation using typical histone H3 lysine 4 trimethylation (H3K4me3) and histone H3 tri-methylated lysine 27 (H3K27me3) markers in castor bean leaves subjected to salt stress. The results showed that gain or loss of histone methylation was closely associated with activated or repressed gene expression, though variations in both transcriptome and histone methylation modifications were relatively narrow in response to salt stress. Diverse salt responsive genes and switched histone methylation sites were identified in this study. In particular, we found for the first time that the transcription of the key salt-response regulator RADIALIS-LIKE SANT (RSM1), a MYB-related transcription factor involved in ABA(abscisic acid)-mediated salt stress signaling, was potentially regulated by bivalent H3K4me3-H3K27me3 modifications. Combining phenotypic variations with transcriptional and epigenetic changes, we provide a comprehensive profile for understanding histone modification, genomic transcription and their associations in response to salt stress in plants.
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Regulación de la Expresión Génica de las Plantas , Histonas/metabolismo , Ricinus communis/metabolismo , Transcripción Genética , Ricinus communis/fisiología , Regulación de la Expresión Génica de las Plantas/fisiología , Código de Histonas , Metilación , Hojas de la Planta/metabolismo , Hojas de la Planta/fisiología , Estrés Salino , Transcripción Genética/fisiologíaRESUMEN
BACKGROUND: Little is known about the molecular basis of seed size formation in endospermic seed of dicotyledons. The seed of castor bean (Ricinus communis L.) is considered as a model system in seed biology studies because of its persistent endosperms throughout seed development. RESULTS: We compared the size of endosperm and endospermic cells between ZB107 and ZB306 and found that the larger seed size of ZB107 resulted from a higher cell count in the endosperm, which occupy a significant amount of the total seed volume. In addition, fresh weight, dry weight, and protein content of seeds were remarkably higher in ZB107 than in ZB306. Comparative proteomic and transcriptomic analyses were performed between large-seed ZB107 and small-seed ZB306, using isobaric tags for relative and absolute quantification (iTRAQ) and RNA-seq technologies, respectively. A total of 1416 protein species were identified, of which 173 were determined as differentially abundant protein species (DAPs). Additionally, there were 9545 differentially expressed genes (DEGs) between ZB306 and ZB107. Functional analyses revealed that these DAPs and DEGs were mainly involved in cell division and the metabolism of carbohydrates and proteins. CONCLUSIONS: These findings suggest that both cell number and storage-component accumulation are critical for the formation of seed size, providing new insight into the potential mechanisms behind seed size formation in endospermic seeds.
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Proteínas de Plantas/metabolismo , Proteoma/metabolismo , Ricinus communis/crecimiento & desarrollo , Semillas/crecimiento & desarrollo , Transcriptoma , Ricinus communis/genética , Ricinus communis/metabolismo , Endospermo/genética , Endospermo/crecimiento & desarrollo , Endospermo/metabolismo , Perfilación de la Expresión Génica , Proteómica , Semillas/genética , Semillas/metabolismoRESUMEN
Cellular autophagy is a widely-occurring conserved process for turning over damaged organelles or recycling cytoplasmic contents in cells. Although autophagy-related genes (ATGs) have been broadly identified from many plants, little is known about the potential function of autophagy in mediating plant growth and development, particularly in recycling cytoplasmic contents during seed development and germination. Castor bean (Ricinus communis) is one of the most important inedible oilseed crops. Its mature seed has a persistent and large endosperm with a hard and lignified seed coat, and is considered a model system for studying seed biology. Here, a total of 34 RcATG genes were identified in the castor bean genome and their sequence structures were characterized. The expressional profiles of these RcATGs were examined using RNA-seq and real-time PCR in a variety of tissues. In particular, we found that most RcATGs were significantly up-regulated in the later stage of seed coat development, tightly associated with the lignification of cell wall tissues. During seed germination, the expression patterns of most RcATGs were associated with the decomposition of storage oils. Furthermore, we observed by electron microscopy that the lipid droplets were directly swallowed by the vacuoles, suggesting that autophagy directly participates in mediating the decomposition of lipid droplets via the microlipophagy pathway in germinating castor bean seeds. This study provides novel insights into understanding the potential function of autophagy in mediating seed development and germination.
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Proteínas Relacionadas con la Autofagia/genética , Perfilación de la Expresión Génica/métodos , Regulación de la Expresión Génica de las Plantas , Genoma de Planta/genética , Genómica/métodos , Ricinus communis/genética , Autofagia/genética , Proteínas Relacionadas con la Autofagia/clasificación , Proteínas Relacionadas con la Autofagia/metabolismo , Ricinus communis/metabolismo , Aceite de Ricino/metabolismo , Endospermo/genética , Endospermo/metabolismo , Germinación/genética , Secuenciación de Nucleótidos de Alto Rendimiento , Gotas Lipídicas/metabolismo , Filogenia , Semillas/genética , Semillas/metabolismoRESUMEN
Fertilization is an important agricultural strategy for enhancing the efficiency of phytoremediation in copper (Cu)-contaminated soils. In this study, the effects of nitrogen (N) forms, including ammonium (NH4+-N) and nitrate (NO3--N), on the growth, translocation, and accumulation of Cu in the tissues of Ricinus communis L. were investigated in pot and hydroponic experiments. The results demonstrated that higher biomass and N contents in plants were obtained when N was supplied as NO3--N rather than NH4+-N. Application of N increased the Cu content in the roots of R. communis, with a higher content after NH4+-N (53.10-64.20 mg kg-1) than NO3--N (37.62-53.75 mg kg-1) treatment. On the contrary, the levels of Cu translocation factors were much higher in NO3--fed plants (0.34-0.45) than in NH4+-fed plants (0.28-0.38). The suggested amount of N for fertilizer application is 225 kg hm-2, which resulted in the highest Cu content in R. communis and optimal plant growth. As the main Cu-binding site, root cell walls accumulated less Cu in plants treated with NH4+-N compared with NO3--N. Additionally, NH4+-N induced a higher malondialdehyde content and more severe root damage compared with NO3--N. In the leaf, a larger number of black granules, which could be protein and starch grains involved in the detoxification of Cu in R. communis, were present after NH4+-N than NO3--N treatment. These results illustrate that N forms are especially important for Cu translocation and accumulation and that immobilization and transformation of Cu in roots were improved more by NH4+-N than NO3--N. In conclusion, N fertilizers containing the appropriate forms applied at suitable rates may enhance the biomass and Cu accumulation of R. communis and thereby the remediation efficiency of Cu-contaminated soils.
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Cobre/metabolismo , Fertilizantes/análisis , Nitrógeno/metabolismo , Ricinus/metabolismo , Contaminantes del Suelo/metabolismo , Compuestos de Amonio/análisis , Biodegradación Ambiental , Biomasa , Ricinus communis/metabolismo , Nitratos/análisis , Raíces de Plantas/metabolismoRESUMEN
The physiological and molecular basis of seed size formation is complex, and the development of seed coat (derived from integument cells) might be a critical factor that determines seed size formation for many endospermic seeds. Castor bean (Ricinus communis L.), a model system of studying seed biology, has large and persistent endosperm with a hard seed coat at maturity. Here, we investigated the potential molecular mechanisms underlying seed size formation in castor bean by comparing the difference between global gene expression within developing seed coat tissues between the large-seed ZB107 and small-seed ZB306. First, we observed the cell size of seed coat and concluded that the large seed coat area of ZB107 resulted from more cell numbers (rather than cell size). Furthermore, we found that the lignin proportion of seed coat was higher in ZB306. An investigation into global gene expression of developing seed coat tissues revealed that 815 genes were up-regulated and 813 were down-regulated in ZB306 relative to ZB107. Interestingly, we found that many genes involved in regulating cell division were up-regulated in ZB107, whereas many genes involved in regulating lignin biosynthesis (including several NAC members, as well as MYB46/83 and MYB58/63) and in mediating programmed cell death (such as CysEP1 and ßVPE) were up-regulated in ZB306. Furthermore, the expression patterns of the genes mentioned above indicated that the lignification of seed coat tissues was enhanced and occurred earlier in the developing seeds of ZB306. Taken together, we tentatively proposed a potential scenario for explaining the molecular mechanisms of seed coat governing seed size formation in castor bean by increasing the cell number and delaying the onset of lignification in seed coat tissues in large-seed ZB107. This study not only presents new information for possible modulation of seed coat related genes to improve castor seed yield, but also provides new insights into understanding the molecular basis of seed size formation in endospermic seeds with hard seed coat.
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Perfilación de la Expresión Génica/métodos , Redes Reguladoras de Genes , Ricinus communis/anatomía & histología , Semillas/anatomía & histología , Ricinus communis/genética , Ricinus communis/metabolismo , Regulación de la Expresión Génica de las Plantas , Ontología de Genes , Secuenciación de Nucleótidos de Alto Rendimiento , Lignina/biosíntesis , Filogenia , Proteínas de Plantas/genética , Semillas/genética , Semillas/metabolismo , Análisis de Secuencia de ADNRESUMEN
INTRODUCTION: Castor (Ricinus communis L.) seeds are valued for their production of oils which can comprise up to 90% hydroxy-fatty acids (ricinoleic acid). Castor oil contains mono-, di- and tri- ricinoleic acid containing triacylglycerols (TAGs). Although the enzymatic synthesis of ricinoleic acid is well described, the differential compartmentalization of these TAG molecular species has remained undefined. OBJECTIVES: To examine the distribution of hydroxy fatty acid accumulation within the endosperm and embryo tissues of castor seeds. METHODS: Matrix assisted laser desorption/ionization mass spectrometry imaging was used to map the distribution of triacylglycerols in tissue sections of castor seeds. In addition, the endosperm and embryo (cotyledons and embryonic axis) tissues were dissected and extracted for quantitative lipidomics analysis and Illumina-based RNA deep sequencing. RESULTS: This study revealed an unexpected heterogeneous tissue distribution of mono-, di- and tri- hydroxy-triacylglycerols in the embryo and endosperm tissues of castor seeds. Pathway analysis based on transcript abundance suggested that distinct embryo- and endosperm-specific mechanisms may exist for the shuttling of ricinoleic acid away from phosphatidylcholine (PC) and into hydroxy TAG production. The embryo-biased mechanism appears to favor removal of ricinoleic acid from PC through phophatidylcholine: diacylglycerol acyltransferase while the endosperm pathway appears to remove ricinoleic acid from the PC pool by preferences of phospholipase A (PLA2α) and/or phosphatidylcholine: diacylglycerol cholinephosphotransferase. CONCLUSIONS: Collectively, a combination of lipidomics and transcriptomics analyses revealed previously undefined spatial aspects of hydroxy fatty acid metabolism in castor seeds. These studies underscore a need for tissue-specific studies as a means to better understand the regulation of triacylglycerol accumulation in oilseeds.
Asunto(s)
Ácidos Ricinoleicos/metabolismo , Ricinus/metabolismo , Ricinus communis/metabolismo , Aceite de Ricino/metabolismo , Diacilglicerol Colinafosfotransferasa , Ácidos Grasos/metabolismo , Fosfolipasas A2 Grupo IV , Fosfatidilcolinas , Ácidos Ricinoleicos/análisis , Ricinus/química , Ricinus/genética , Semillas/química , Semillas/metabolismo , Análisis de Secuencia de ARN , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Triglicéridos/metabolismoRESUMEN
The castor bean, Ricinus communis L., is a non-host plant for the large black chafer, Holotrichia parallela Motschulsky (Coleoptera: Scarabaeidae). In laboratory bioassays we found that this plant was no less attractive than the main host plant (peanut, Arachis hypogaea) and three food plant species: velvetleaf (Abutilon theophrasti), the glossy privet (Ligustrum lucidum), and the Siberian elm (Ulmus pumila). In field trapping experiments a Soxhlet extract of castor bean leaves caught more beetles than the optimal sex lure blend [(R)-(-)-linalool and (L)-isoleucine methyl ester blended in a ratio of 1:4], compared at equal doses (500 µl), and laboratory bioassays indicated that a castor bean plant could enhance the attractiveness of different blend ratios of sex lures. Olfactometer bioassays showed that males prefer volatiles emitted from different combinations of castor bean plant extracts and a signaling female over a female alone. In the presence of castor bean plants copulation rates of H. parallela were highest among all test environments both in laboratory bioassays (60%) and in field tests (70%). This study, combined with our previous observation of the feeding behavior of H. parallela adults on castor bean leaves, suggests that castor bean plants may provide an attractive but risky mating site for H. parallela beetles. The enhancement of male mate-location and copulation rate in the presence of castor bean plants can balance its paralytic effects on H. parallela after intake of potential toxins contained in its leaves.
Asunto(s)
Escarabajos/efectos de los fármacos , Ricinus communis/metabolismo , Conducta Sexual Animal/efectos de los fármacos , Animales , Femenino , Masculino , Riesgo , Compuestos Orgánicos Volátiles/metabolismo , Compuestos Orgánicos Volátiles/farmacologíaRESUMEN
Cadmium (Cd) is considered to be the most phytotoxic heavy metal pollutant. The selection of castor bean cultivars with Cd tolerance and the exploration of the physiological mechanisms involved in Cd tolerance are critical steps for improving phytoremediation performance. In this study, a hydroponic experiment was used to investigate variations in Cd transportation, chelation, and subcellular distribution in two different castor bean cultivars, namely JX-22 and ZB-9. Both cultivars had high tolerance index scores, indicating that both cultivars were tolerant to Cd. The findings of the present study indicate that Cd is significantly more mobile in JX-22 than in ZB-9 during xylem and phloem transportation, resulting in the accumulation of Cd in the shoots of JX-22 was 7.67 times that in ZB-9. Subcellular distribution assessment verified that more Cd was bound to the biologically detoxified metal fractions than the metal sensitive fractions in JX-22. The contents of the non-protein thiol pool and glutathione in the leaves were higher in JX-22 than ZB-9 when exposed to Cd. These results indicate that JX-22 has a greater ability to accumulate Cd, and well-coordinated physiological changes in JX-22 afford greater Cd tolerance in comparison to ZB-9 under Cd exposure, indicating that JX-22 is suitable for use in the remediation of Cd-contaminated soils.
Asunto(s)
Adaptación Fisiológica , Cadmio/metabolismo , Inactivación Metabólica , Metales Pesados/metabolismo , Ricinus communis/metabolismo , Contaminantes del Suelo/metabolismo , Adsorción , Biodegradación Ambiental , Transporte Biológico , Ricinus communis/clasificación , Quelantes , Floema/metabolismo , Hojas de la Planta/metabolismo , Raíces de Plantas/metabolismo , Ricinus/metabolismo , Especificidad de la Especie , Xilema/metabolismoRESUMEN
In plants, trehalose 6-phosphate (T6P) is a key signaling metabolite that functions as both a signal and negative feedback regulator of sucrose levels. The mode of action by which T6P senses and regulates sucrose is not fully understood. Here, we demonstrate that the sucrolytic activity of RcSUS1, the dominant sucrose synthase isozyme expressed in developing castor beans, is allosterically inhibited by T6P. The feedback inhibition of SUS by T6P may contribute to the control of sink strength and sucrolytic flux in heterotrophic plant tissues.
Asunto(s)
Glucosiltransferasas/metabolismo , Glucólisis , Ricinus communis/metabolismo , Sacarosa/metabolismo , Fosfatos de Azúcar/fisiología , Trehalosa/análogos & derivados , Ricinus communis/enzimología , Ricinus communis/crecimiento & desarrollo , Retroalimentación Fisiológica/efectos de los fármacos , Glucólisis/efectos de los fármacos , Redes y Vías Metabólicas/efectos de los fármacos , Desarrollo de la Planta/fisiología , Fosfatos de Azúcar/farmacología , Trehalosa/metabolismo , Trehalosa/farmacología , Trehalosa/fisiologíaRESUMEN
While plant oils are an important source of food, plants also produce oils containing specialized fatty acids with chemical and physical properties valued in industry. Ricinoleic acid, a hydroxy fatty acid (HFA) produced in the seed of castor (Ricinus communis), is of particular value, with a wide range of applications. Since castor cultivation is currently successful only in tropical climates, and because castor seed contain the toxin ricin, there are ongoing efforts to develop a temperate crop capable of HFA biosynthesis. In castor, ricinoleic acid is incorporated into triacylglycerol (TAG) which accumulates in the seed lipid droplets. Research in the model plant Arabidopsis (Arabidopsis thaliana) has successfully produced HFA constituting 30% of the total seed oil, but this is far short of the level required to engineer commercially viable crops. Strategies to increase HFA have centered on co-expression of castor TAG biosynthesis enzymes. However, since lipid droplets are the location of neutral lipid storage, manipulating droplets offers an alternative method to increase oil that contains specialized fatty acids. The Arabidopsis Seipin1 protein modulates TAG accumulation by affecting lipid droplet size. Here, we overexpress Seipin1 in a hydroxylase-expressing Arabidopsis line, increasing seed HFA by 62% and proportionally increasing total oil. Increased seed oil was concomitant with a 22% increase in single seed weight and a 69% increase in harvest weight, while seed germination rose by 45%. Because Seipin1 function is unaffected by the structure of the HFA, these results demonstrate a novel strategy that may increase accumulation of many specialized seed oils.