RESUMEN
Six soils, obtained from grasslands and wooded areas in Northeastern Illinois, were physicochemically characterized. Measured parameters included total organic carbon (TOC) content, contents of humic acid, fulvic acid and humin, pore volume and pore size distribution, and chemical makeup of soil organic matter (determined using solid-state 13C-NMR). Moistened, gamma-sterilized soils were spiked with 200 ppm of either phenanthrene or pyrene (including 14C label); following 0, 40, or 120 days of aging, the contaminant-spiked soils were then inoculated with Mycobacterium austroafricanum strain GTI-23, and evolution of 14CO2 was assessed over a 28-day period. Results for both phenanthrene and pyrene indicated that increased contact time led to increased sequestration and reduced biodegradation, and that TOC content was the most important parameter governing these processes. One soil, although only tested with phenanthrene, showed significantly lower-than-expected sequestration (higher-than-expected mineralization) after 40 days of aging, despite a very high TOC value (>24%). Because the level of sequestration in this soil was proportional to the others after 120 days of aging, this implies some difference in the temporal progression of sequestration in this soil, although not in its final result. The primary distinguishing feature of this soil was its considerably elevated fulvic acid content. Further experiments showed that addition of exogenous fulvic acid to a soil with very low endogenous humic acids/fulvic acids content greatly enhanced pyrene mineralization by M. austroafricanum. Extractabilities of 13 three- to six-ring coal tar PAHs in n-butanol from the six soils after 120 days of sequestration were strongly TOC-dependent; however, there was no discernible correlation between n-butanol extractability and mycobacterial PAH mineralization.
Asunto(s)
Química Física/métodos , Mycobacterium/metabolismo , Hidrocarburos Policíclicos Aromáticos/metabolismo , Suelo , 1-Butanol/química , Benzopiranos/análisis , Benzopiranos/metabolismo , Biodegradación Ambiental , Carbono/análisis , Dióxido de Carbono/metabolismo , Sustancias Húmicas/análisis , Sustancias Húmicas/metabolismo , Illinois , Minerales/metabolismo , Fenantrenos/metabolismo , Hidrocarburos Policíclicos Aromáticos/química , Microbiología del SueloRESUMEN
A quinone-respiring, enrichment culture derived from methanogenic granular sludge was phylogenetically characterized by using a combined cloning-denaturing gradient gel electrophoresis (DGGE) method, which revealed that the consortium developed was dominated by a single microorganism: 97% related, in a sequence of 1520 base pairs, to Geobacter sulfurreducens. The enrichment culture could grow with acetate, formate or H2 when humic acids, the humic model compound, anthraquinone-2,6-disulfonate (AQDS), or chelated Fe(III) was provided as a terminal electron acceptor. The occurrence of a humic acid- or quinone-respiring microorganism in the microbial community of a wastewater treatment system suggests that this type of microorganisms may play a potential role in anaerobic bioreactors treating humus-containing wastewaters.
Asunto(s)
Acetatos/metabolismo , Antraquinonas/metabolismo , Deltaproteobacteria/aislamiento & purificación , Deltaproteobacteria/metabolismo , Aguas del Alcantarillado/microbiología , Anaerobiosis , Técnicas de Cultivo de Célula/métodos , Ensayo Cometa/métodos , Medios de Cultivo/metabolismo , Deltaproteobacteria/genética , Deltaproteobacteria/crecimiento & desarrollo , Deltaproteobacteria/fisiología , Transporte de Electrón , Formiatos/metabolismo , Sustancias Húmicas/metabolismo , Hidrógeno/metabolismo , Oxidación-Reducción , Filogenia , Quinonas/metabolismo , Alineación de Secuencia/métodos , Análisis de Secuencia/métodos , Microbiología del Suelo , Especificidad por SustratoRESUMEN
Phenolic compounds originating from plant residue decomposition or microbial metabolism form humic-like polymers during oxidative coupling reactions mediated by various phenoloxidases or metal oxides. Xenobiotic phenols participating in these reactions undergo either polymerization or binding to soil organic matter. Another effect of oxidative coupling is dehalogenation, decarboxylation or demethoxylation of the substrates. To investigate these phenomena, several naturally occurring and xenobiotic phenols were incubated with various phenoloxidases (peroxidase, laccase, tyrosinase) or with birnessite (delta-MnO(2)), and monitored for chloride release, CO(2) evolution, and methanol or methane production. The release of chloride ions during polymerization and binding ranged between 0.2% and 41.4%. Using the test compounds labeled with 14C in three different locations (carboxyl group, aromatic ring, or aliphatic chain), it was demonstrated that 14CO(2) evolution was mainly associated with the release of carboxyl groups (17.8-54.8% of the initial radioactivity). Little mineralization of 14C-labeled aromatic rings or aliphatic carbons occurred in catechol, ferulic or p-coumaric acids (0.1-0.7%). Demethoxylation ranged from 0.5% to 13.9% for 2,6-dimethoxyphenol and syringic acid, respectively. Methylphenols showed no demethylation. In conclusion, dehalogenation, decarboxylation and demethoxylation of phenolic substrates appear to be controlled by a common mechanism, in which various substituents are released if they are attached to carbon atoms involved in coupling. Electron-withdrawing substituents, such as -COOH and -Cl, are more susceptible to release than electron-donating ones, such as -OCH(3) and -CH(3). The release of organic substituents during polymerization and binding of phenols may add to CO(2) production in soil.
Asunto(s)
Fenoles/metabolismo , Dióxido de Carbono/análisis , Dióxido de Carbono/metabolismo , Isótopos de Carbono , Cloruros/análisis , Cloruros/química , Cloruros/metabolismo , Descarboxilación , Radicales Libres/química , Radicales Libres/metabolismo , Halógenos/química , Sustancias Húmicas/metabolismo , Manganeso/química , Manganeso/metabolismo , Metilación , Oxidación-Reducción , Oxidorreductasas/metabolismo , Fenoles/química , Polímeros/química , Polímeros/metabolismoRESUMEN
Three samples of high-molecular-weight humin-like substances were obtained by solid-phase cultivation of Coriolus hirsutus and/or Cerrena maxima on oat straw. The yield of humin-like substances amounted to 1.38-2.26% of the weight of the plant substrate consumed. These substances, produced both by individual and mixed cultures of the basidiomycetes, were shown to be similar in their structure and physicochemical properties. According to the data of IR and 13C-NMR spectroscopy, the substances contained aromatic fragments and were close to soil humic acids. Studies of the dynamics of laccase production suggested that the humin-like substances were produced bia direct degradation of lignin macromolecules with direct involvement of extracellular laccase.
Asunto(s)
Basidiomycota/metabolismo , Sustancias Húmicas/metabolismo , Árboles/metabolismo , Avena , Basidiomycota/crecimiento & desarrollo , Biodegradación Ambiental , Cromatografía en Gel , Medios de Cultivo , Sustancias Húmicas/análisis , Sustancias Húmicas/aislamiento & purificación , Lacasa , Lignina/metabolismo , Espectroscopía de Resonancia Magnética , Oxidorreductasas/metabolismo , Espectrofotometría InfrarrojaRESUMEN
Biosorption of high molecular weight humic substances (HS) to activated sludge (AS) biomass may be considered as a preliminary step previous to enzymatic hydrolysis breakdown and biological uptake. Two standard HS, Suwannee River humic and fulvic acids, were biosorbed onto live AS biomass collected from full-scale wastewater treatment plants. Biosorption isotherms were corrected for interference from organic matter desorbed from AS biomass. The effect of pH, calcium and ionic strength on biosorption was tested. HS biosorption to live AS biomass obeyed the Freundlich isotherm equation. Biosorption increased with decreasing pH, increasing calcium and ionic strength concentration. Higher biosorption at low pH may be attributed to hydrophobic interactions between HS and AS biomass extracellular polymers (EPS). Hydrophobic and cationic bridging effects between HS and AS EPS were the mechanisms responsible for biosorption under the presence of divalent cations; however, the former was most significant at low pH, whereas the latter was predominant near neutral pH. The effect of ionic strength on HS biosorption followed the colloidal chemistry theory as the electric double layer became compressed when the ionic strength increased, resulting in closer approach of HS and AS biomass. The humic acid fraction of Suwannee River was removed more efficiently than its fulvic acid fraction because the humic acid was more hydrophobic. These results showed that pH, divalent cation concentration and ionic strength play an important role in the fate and removal of influent wastewater HS in full-scale treatment plants.
Asunto(s)
Benzopiranos/farmacocinética , Sustancias Húmicas/farmacocinética , Aguas del Alcantarillado/microbiología , Purificación del Agua/métodos , Absorción , Benzopiranos/metabolismo , Biomasa , Reactores Biológicos , Cationes , Sustancias Húmicas/metabolismo , Concentración de Iones de Hidrógeno , Peso Molecular , Aguas del Alcantarillado/química , Eliminación de Residuos LíquidosRESUMEN
In terrestrial ecosystems, changes in environmental conditions that affect plant performance cause a cascade of effects through many trophic levels. In a 2-year field study, seasonal abundance measurements were conducted for fast-growing bacterial heterotrophs, humate-degrading actinomycetes, fungal heterotrophs, and fluorescent pseudomonads that represent the decomposers in soil. Links between plant health and soil microbiota abundance in pinyon rhizospheres were documented across two soil types: a dry, nutrient-poor volcanic cinder field and a sandy-loam soil. On the stressful cinder fields, we identified relationships between soil decomposer abundance, pinyon age, and stress due to insect herbivory. Across seasonal variation, consistent differences in microbial decomposer abundance were identified between the cinders and sandy-loam soil. Abundance of bacterial heterotrophs and humate-degrading actinomycetes was affected by both soil nutritional status and the pinyon rhizosphere. In contrast, abundance of the fungal heterotrophs and fluorescent pseudomonads was affected primarily by the pinyon rhizosphere. On the cinder field, the three bacterial groups were more abundant on 150-year-old trees than on 60-year-old trees, whereas fungal heterotrophs were unaffected by tree age. Fungal heterotrophs and actinomycetes were more abundant on insect-resistant trees than on susceptible trees, but the opposite was true for the fluorescent pseudomonads. Although all four groups were present in all the environments, the four microbial groups were affected differently by the pinyon rhizosphere, by tree age, and by tree stress caused by the cinder soil and insect herbivory.
Asunto(s)
Sustancias Húmicas/metabolismo , Pinus , Raíces de Plantas/microbiología , Microbiología del Suelo , Animales , Ecosistema , Hongos , Insectos , Dinámica Poblacional , Pseudomonadaceae , Estaciones del AñoRESUMEN
Stenohaline freshwater stingrays (Potamotrygon spp.) are endemic to the very dilute (Na(+), Cl(-), Ca2(+)
Asunto(s)
Calcio/metabolismo , Agua Dulce/química , Rajidae/fisiología , Sodio/metabolismo , Amoníaco/metabolismo , Animales , Brasil , Calcio/análisis , Sustancias Húmicas/metabolismo , Concentración de Iones de Hidrógeno , Iones/análisis , Iones/metabolismo , Cinética , Rajidae/metabolismo , Sodio/análisisRESUMEN
Ozone is widely used to disinfect drinking water and wastewater due to its strong biocidal oxidizing properties. Recently, it was reported that hydroxyl radicals ((.)OH), resulting from ozone decomposition, play a significant role in microbial inactivation when Bacillus subtilis endospores were used as the test microorganisms in pH controlled distilled water. However, it is not yet known how natural organic matter (NOM), which is ubiquitous in sources of drinking water, affects this process of disinfection by ozone-initiated radical reactions. Two types of water matrix were considered for this study. One is water containing humic acid, which is commercially available. The other is water from the Han River. This study reported that hydroxyl radicals, initiated by the ozone chain reaction, were significantly effective at B. subtilis endospore inactivation in water containing NOM, as well as in pH-controlled distilled water. The type of NOM and the pH have a considerable effect on the percentage of disinfection by hydroxyl radicals, which ranged from 20 to 50%. In addition, the theoretical T value of hydroxyl radicals for 2-log B. subtilis removal was estimated to be about 2.4 x 10(4) times smaller than that of ozone, assuming that there is no synergistic activity between ozone and hydroxyl radicals.
Asunto(s)
Desinfección/métodos , Radicales Libres/metabolismo , Sustancias Húmicas/metabolismo , Compuestos Orgánicos/metabolismo , Ozono/metabolismo , Purificación del Agua/métodos , Bacillus subtilis/efectos de los fármacos , Bacillus subtilis/crecimiento & desarrollo , Radicales Libres/farmacología , Agua Dulce/microbiología , Esporas Bacterianas/efectos de los fármacos , Esporas Bacterianas/crecimiento & desarrolloRESUMEN
DNA quantification of soils and sediments is useful for the investigation of microbial communities and for the acquisition of their genomes that are exploited for the production of natural products. However, in such samples DNA quantification is impaired by humic acids (HA). Due to its lack of specificity and sensitivity, UV spectrophotometry cannot be applied. Consequently, fluorimetric assays applying Hoechst (H) 33258 or PicoGreen (PG) are used. Here, we investigated the SYBR Green I (SG) assay, which was also affected by HA, but was found to be 25- and 1.7-fold more sensitive compared to the H 33258 and PG assays, respectively. Spectrophotometric, fluorimetric and quenching studies as well as gel mobility shift assays suggested that the effect of HA on the SG assay was based on an inner filter effect, collisional quenching and binding of SG to HA. As to the latter finding, the standard 6250-fold dilution of the SG reagent was optimised to a 2000-fold dilution. Although the sensitivity of the optimised SG assay was reduced by a factor of 1.3, the interfering effect of HA could be reduced up to 22-fold. A significant reduction of HA interferences by lowering the pH of the assay was not observed. Finally, the performance of the modified SG assay and the corresponding evaluation methods were verified by the determination of DNA recoveries and concentrations of standards and environmental samples in comparison to the PG assay.
Asunto(s)
ADN/análisis , Colorantes Fluorescentes/química , Sedimentos Geológicos/análisis , Sustancias Húmicas/química , Compuestos Orgánicos , Suelo/análisis , Agua/análisis , Benzotiazoles , Unión Competitiva , ADN/metabolismo , Diaminas , Ensayo de Cambio de Movilidad Electroforética , Colorantes Fluorescentes/metabolismo , Sustancias Húmicas/metabolismo , Concentración de Iones de Hidrógeno , Quinolinas , Sensibilidad y Especificidad , Espectrometría de Fluorescencia/métodosRESUMEN
The retention of phenol, o-cresol, 2,4-dichlorophenol (DCP), and their peroxidase-catalyzed polymerization products was evaluated on two surface soils. The extractability of the parent solutes and their polymerization products was also investigated. (14)C-Labeled radioisotopes were used to quantify the contaminant retained on soil as water-extractable, methanol-extractable, humic/fulvic (HA/FA) acid-bound, and soil/humin bound. Between 2 and 20% of the solute retained on soil after a 7-day contact period remained bound to the HA/FA and soil/humin components in unamended soils; in the presence of peroxidase this amount was as high as 40-75%. The alkali-extractable HA/FA component contained the largest fraction of radioactivity in peroxidase-amended soils. Whereas the soil organic matter content was the predominant factor controlling the extent of sorption of the parent phenols, the clay content and particle surface area appeared to contribute to the retention of the polymerization products. High molecular weight oligomers produced during peroxidase-mediated polymerization of phenols associate strongly with soil components and are likely incorporated into the soil organic matter via oxidative coupling reactions.
Asunto(s)
Clorofenoles/química , Cresoles/química , Peroxidasa de Rábano Silvestre/metabolismo , Fenol/química , Suelo/análisis , Benzopiranos/metabolismo , Radioisótopos de Carbono , Fenómenos Químicos , Química Física , Clorofenoles/aislamiento & purificación , Clorofenoles/metabolismo , Cresoles/aislamiento & purificación , Cresoles/metabolismo , Sustancias Húmicas/metabolismo , Concentración de Iones de Hidrógeno , Fenol/aislamiento & purificación , Fenol/metabolismo , Polímeros/metabolismo , Contaminantes del Suelo/aislamiento & purificación , Contaminantes del Agua/aislamiento & purificaciónRESUMEN
The biodegradation of two acetanilide herbicides, acetochlor and butachlor in soil after other environmental organic matter addition were measured during 35 days laboratory incubations. The herbicides were applied to soil alone, soil-SDBS (sodium dodecylbenzene sulfonate) mixtures and soil-HA (humic acid) mixtures. Herbicide biodegradation kinetics were compared in the different treatment. Biodegradation products of herbicides in soil alone samples were identified by GC/MS at the end of incubation. Addition of SDBS and HA to soil decreased acetochlor biodegradation, but increased butachlor biodegradation. The biodegradation half-life of acetochlor and butachlor in soil alone, soil-SDBS mixtures and soil-HA mixtures were 4.6 d, 6.1 d and 5.4 d and 5.3 d, 4.9 d and 5.3 d respectively. The biodegradation products were hydroxyacetochlor and 2-methyl-6-ethylaniline for acetochlor, and hydroxybutachlor and 2,6-diethylaniline for butachlor.
Asunto(s)
Acetanilidas/metabolismo , Herbicidas/metabolismo , Microbiología del Suelo , Toluidinas/metabolismo , Bencenosulfonatos/metabolismo , Biodegradación Ambiental , Semivida , Sustancias Húmicas/metabolismo , CinéticaRESUMEN
In riverbank filtration, contaminant transport is affected by colloidal particles such as dissolved organic matter (DOM) and bacterial particles. In addition, the subsurface heterogeneity influences the behavior of contaminant transport in riverbank filtration. A mathematical model is developed to describe the contaminant transport in dual-porosity media in the presence of DOM and bacteria as mobile colloids. In the model development, a porous medium is divided into the mobile and immobile regions to consider the presence of ineffective micropores in physically heterogeneous riverbanks. We assume that the contaminant transport in the mobile region is controlled by the advection and dispersion while the contaminant transport in the immobile region occurs due to the molecular diffusion. The contaminant transfer between the mobile and immobile regions takes place by diffusive mass transfer. The mobile region is conceptualized as a four-phase system: two mobile colloidal phases, an aqueous phase, and a solid matrix. The complete set of governing equations is solved numerically with a fully implicit finite difference method. The model results show that in riverbank filtration, the contaminant can migrate further than expected due to the presence of DOM and bacteria. In addition, the contaminant mobility increases further in the presence of the immobile region in aquifers. A sensitivity analysis shows that in dual-porosity media, earlier breakthrough of the contaminant takes place as the volumetric fraction of the mobile region decreases. It is also demonstrated that as the contaminant mass transfer rate coefficient between the mobile and immobile regions increases, the contaminant concentration gradient between the two regions reverses at earlier pore volumes. The contaminant mass transfer coefficient between the mobile and immobile regions mainly controls the tailing effect of the contaminant breakthrough. The contaminant breakthrough curves are sensitive to changes in contaminant adsorption and desorption rate coefficients on DOM and bacteria. In situations where the contaminant is released in the presence of DOM and bacteria in dual-porosity media, the early breakthrough and tailing occur due to the colloidal facilitation and presence of immobile regions.
Asunto(s)
Bacterias/crecimiento & desarrollo , Coloides , Modelos Químicos , Contaminantes Químicos del Agua , Adsorción , Simulación por Computador , Filtración/métodos , Agua Dulce/microbiología , Sustancias Húmicas/metabolismo , Compuestos Orgánicos/químicaRESUMEN
The changes of the total nitrogen, average yearly concentration of ammonia, nitrate ions, urease activity, total amount of amino acids in humic acids (HA) and the structure of humic acids were monitored in relation to the effect of shelterbelt as biogeochemical barrier located on a mineral and mineral-organic soil. The transformation of different forms of nitrogen in the soil under shelterbelt was strongly connected with the humification process and the molecular structure of humic acids.
Asunto(s)
Aminoácidos/metabolismo , Sustancias Húmicas/análisis , Sustancias Húmicas/metabolismo , Nitrógeno/metabolismo , Suelo , Agricultura , Aminoácidos/análisis , Isótopos de Carbono/análisis , Fenómenos Geológicos , Geología , Espectroscopía de Resonancia Magnética , Nitrógeno/análisis , Compuestos Orgánicos/análisis , Compuestos Orgánicos/metabolismo , ÁrbolesRESUMEN
This study measured the chemical uptake of three hydrophobic chemicals (1,2,4-trichlorobenzene (1,2,4-TCB), 1,2,3,4,5-pentachlorobenzene (PeCB) and 2,2',4,4',6,6'-hexachlorobiphenyl (HCBP) with differing octanol-water partition coefficients (log K(ow) values of 3.95, 5.05 and 7.55, respectively) in juvenile rainbow trout (Oncorhynchus mykiss) after 2-day and 4-day aqueous exposures. Because of the affinity of hydrophobic compounds for dissolved organic carbon (DOC) and previous work demonstrating that fish gills take up these three hydrophobic chemicals, we predicted that chemical uptake into the fish would be lowered by the addition of humic acid to the water (1.54, 4.81 and 14.3 mg/l) compared with control fish (no humic acid added to the water). As predicted, humic acid concentrations of >or=4.81 mg/l significantly reduced the whole body concentrations of all three chemicals when compared with 1.54 mg/l humic acid. This effect of humic acid was greatest for HCBP, the chemical with the highest log K(ow), such that chemical uptake was reduced by 3.4-fold for 14.3 mg/l humic acid compared with the control exposure. However, an unexpected finding was that, compared with the control exposure, the lowest concentration of humic acid tested (1.54 mg/l humic acid) significantly increased chemical uptake by up to 112% for the two chemicals with the lower log K(ow), PeCB and 1,2,4-TCB, and did not affect uptake of the high log K(ow) chemical HCBP. We conclude that the ability of DOC to inhibit aqueous uptake of hydrophobic chemicals was dependent on both the concentration of DOC and the log K(ow) of the chemical, but that low humic acid concentrations of approximately 1.5 mg/l can significantly increase uptake of certain chemicals with a log K(ow) between 4 and 5.
Asunto(s)
Clorobencenos/metabolismo , Sustancias Húmicas/farmacología , Interacciones Hidrofóbicas e Hidrofílicas , Oncorhynchus mykiss/metabolismo , Bifenilos Policlorados/metabolismo , Animales , Sustancias Húmicas/metabolismo , SolubilidadRESUMEN
Aquatic humic substances (HS) from a bog lake water, a riverwater, and a groundwater were isolated after enrichment on XAD 8 columns and added to a Czapek-Dox nutrient broth which was used either in full strength or without glucose and/or NaNO3. The individual flasks were inoculated with natural microbial populations of corresponding water samples or with a Pseudomonas fluorescens strain isolated from groundwater. The presence of HS resulted in an increase of bacterial numbers in nearly all cultures incubated for 3 weeks at 25 degrees C on a shaker. HS reisolated from cultures without glucose or NaNO3 showed no or only minor quantitative differences as compared to those from sterile controls. In full strength nutrient broth up to 27% of HS were utilized. Data obtained by spectroscopic methods (UV/vis/FTIR) and elemental analysis indicated a decrease in particle size and a loss in aromaticity and aliphatic carbon in HS reisolated from the microbial cultures. Simultaneously an increase in the N content of HS was observed, which probably originated from some constituents of microbial biomass such as proteins and amino sugars. The NMR data also documented that significant transformations of HS occurred in the individual microbial cultures. After incubation, increased amounts of aromatic acids were detected in some liquid media and residual HS by GC/MS or capillary electrophoresis. 1H NMR spectroscopy was less effective in indicating structural differences in the HS than 13C NMR but revealed considerable detail of the microbial degradation of riverine HS, when limited sample was available. The newly developed NMR increment analysis provided substantial detail of aromatic structures in a microbially altered HS. The microbial degradation of HS strongly depended on the composition of the HS, the species selection of the microorganisms, and to a lesser extent on the culture conditions. For any series of identical inoculum and HS, full broth media initiated the most extensive alteration of HS.
Asunto(s)
Sustancias Húmicas/metabolismo , Microbiología del Agua , Contaminantes del Agua/metabolismo , Disponibilidad Biológica , Espectroscopía de Resonancia Magnética , Pseudomonas fluorescens/fisiologíaRESUMEN
Humic and fulvic acids extracted from soils of different genesis were investigated for their ability to photoinduce the transformation of fenuron (2 x 10(-4) mol(-1)) at 365 nm. The ratio of the initial rate of fenuron consumption over the rate of light absorption by humic substances was found to be higher for fulvic acids (range 2.0 x 10(-3) to 9.0 x 10(-5)) than for humic acids (range 1.7 x 10(-4) to - 3.6 x 10(-5)). Within the FAs population, this ratio decreased as the specific absorption coefficient at 365 nm increased. It seems therefore that most of 365-nm absorbing components have no photoinductive activity and even reduce that of photoinductive chromophores.
Asunto(s)
Benzopiranos/metabolismo , Sustancias Húmicas/metabolismo , Fotoquímica/métodos , Benzopiranos/química , Benzopiranos/aislamiento & purificación , Biodegradación Ambiental , Técnicas de Química Analítica/métodos , Sustancias Húmicas/química , Sustancias Húmicas/aislamiento & purificación , Luz , Compuestos de Fenilurea/química , Compuestos de Fenilurea/metabolismo , Compuestos de Fenilurea/efectos de la radiación , Radiación , SueloRESUMEN
The main factors responsible for anaerobic recalcitrance are reviewed. Anaerobic recalcitrance is associated with hydrocarbons lacking functional groups, branched molecules (gasoline oxygenates), aromatic amines and aromatic sulfonates. The most recalcitrant compounds are high molecular weight nonhydrolyzable polymers such as plastic, lignin and humus, which cannot be taken up by cells. Recently new capabilities of anaerobic microorganisms have been discovered to degrade compounds previously considered to be recalcitrant. For example, anaerobic bacteria initiate the degradation of alkylbenzenes and alkanes with an unusual addition reaction with fumarate, forming a hydrocarbon-succinate adduct. Finally, new evidence indicates that the most recalcitrant compounds (humic substances) are not so inert and can play important roles in aiding the biodegradation of other compounds by serving as an electron acceptor or redox mediator.
Asunto(s)
Bacterias Anaerobias/fisiología , Hidrocarburos Aromáticos/metabolismo , Biodegradación Ambiental , Contaminantes Ambientales/metabolismo , Sustancias Húmicas/metabolismo , Peso Molecular , Polímeros/metabolismoRESUMEN
Humic acid (HA), know to be ubiquitous in the natural environment, is present in almost all soil, surface water, and plants. Earlier studies indicate that HA can affect thyroid economy via binding with iodide, inhibiting both thyroid peroxidase and hepatic 5'-deiodinase in rodents. However, the effect of HA, a peroxisome proliferator in rodents, on thyroid hormone receptor (TR) and peroxisome proliferator-activated receptor (PPAR) in human cells has not yet been examined. In this study, we demonstrate that the malic enzyme activity and the transcriptional activities of endogenous TR and PPAR were inhibited after treatment with HA in human hepatocyte Chang liver cell line. Although the protein expression levels of TR-beta, PPAR-alpha and retinoid X receptor-alpha (RXRalpha) were not changed significantly by HA treatment, both the binding abilities of endogenous TR-beta on thyroid hormone response element (TRE) and PPAR-alpha on the PPAR response element (PPRE) were inhibited by HA treatment. The study of the subcellular distribution of HA, relying on the inherent HA fluorescence, showed that HA distributed in the intracellular compartments including cytoplasm and nucleus. The 50% binding inhibition values (CI(50)) of HA on ME-TRE (malic enzyme gene-TRE) and ACOX-PPRE (acylCoA oxidase gene-PPRE) were 19.31 and 19.94 microg/mL, respectively. These results suggest that HA-induced endemic goiter may link in part to the disruption of TRbeta and PPARalpha function in human Chang liver cells. This model may be useful in the investigation of environmental goitrogens.
Asunto(s)
Quelantes/farmacología , Sustancias Húmicas/farmacología , Hígado/metabolismo , Receptores Citoplasmáticos y Nucleares/antagonistas & inhibidores , Receptores de Hormona Tiroidea/antagonistas & inhibidores , Factores de Transcripción/antagonistas & inhibidores , Western Blotting , Línea Celular , Membrana Celular/efectos de los fármacos , Membrana Celular/metabolismo , Núcleo Celular/efectos de los fármacos , Núcleo Celular/metabolismo , ADN/análisis , ADN/metabolismo , Electroforesis , Humanos , Sustancias Húmicas/metabolismo , Malato Deshidrogenasa/antagonistas & inhibidores , Malato Deshidrogenasa/metabolismo , Microscopía Fluorescente , Plásmidos/genética , Receptores Citoplasmáticos y Nucleares/genética , Receptores de Ácido Retinoico/antagonistas & inhibidores , Receptores de Ácido Retinoico/genética , Receptores de Hormona Tiroidea/genética , Receptores X Retinoide , Fracciones Subcelulares/metabolismo , Receptores beta de Hormona Tiroidea , Factores de Transcripción/genética , TransfecciónRESUMEN
The basidiomycete Collybia dryophila K209, which colonizes forest soil, was found to decompose a natural humic acid isolated from pine-forest litter (LHA) and a synthetic (14)C-labeled humic acid ((14)C-HA) prepared from [U-(14)C]catechol in liquid culture. Degradation resulted in the formation of polar, lower-molecular-mass fulvic acid (FA) and carbon dioxide. HA decomposition was considerably enhanced in the presence of Mn(2+) (200 microM), leading to 75% conversion of LHA and 50% mineralization of (14)C-HA (compared to 60% and 20%, respectively, in the absence of Mn(2+)). There was a strong indication that manganese peroxidase (MnP), the production of which was noticeably increased in Mn(2+)-supplemented cultures, was responsible for this effect. The enzyme was produced as a single protein with a pI of 4.7 and a molecular mass of 44 kDa. During solid-state cultivation, C. dryophila released substantial amounts of water-soluble FA (predominantly of 0.9 kDa molecular mass) from insoluble litter material. The results indicate that basidiomycetes such as C. dryophila which colonize forest litter and soil are involved in humus turnover by their recycling of high-molecular-mass humic substances. Extracellular MnP seems to be a key enzyme in the conversion process.
Asunto(s)
Basidiomycota/metabolismo , Sustancias Húmicas/metabolismo , Pinus/química , Basidiomycota/fisiología , Radioisótopos de Carbono , Peroxidasas/aislamiento & purificación , Peroxidasas/metabolismo , Pinus/metabolismo , Hojas de la Planta/química , Hojas de la Planta/metabolismoRESUMEN
Here we show, for the first time, evidence of the primary molecular structures in humic substances (HS), the most abundant naturally occurring organic molecules on Earth, and their associations as mixtures in terrestrial systems. Multi-dimensional nuclear magnetic resonance (NMR) experiments show us that the major molecular structural components in the mixtures operationally defined as HS are aliphatic acids, ethers, esters and alcohols; aromatic lignin derived fragments; polysaccharides and polypeptides. By means of diffusion ordered spectroscopy, distinct diffusion coefficients consistent with relatively low molecular weight molecules were observed for all the components in the mixtures, and saccharides were the largest single class of component present. Liquid chromatography NMR confirmed that HS components can be easily separated and nuclear Overhauser effect (NOE) enhancements support the finding that the components are of relatively low molecular weight Asunto(s)
Sustancias Húmicas/metabolismo
, Plantas/metabolismo
, Animales
, Bacterias/metabolismo
, Ecosistema
, Hongos/metabolismo