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1.
Chembiochem ; 22(11): 2002-2009, 2021 06 02.
Artículo en Inglés | MEDLINE | ID: mdl-33594780

RESUMEN

Selenium-modified nucleosides are powerful tools to study the structure and function of nucleic acids and their protein interactions. The widespread application of 2-selenopyrimidine nucleosides is currently limited by low yields in established synthetic routes. Herein, we describe the optimization of the synthesis of 2-Se-uridine and 2-Se-thymidine derivatives by thermostable nucleoside phosphorylases in transglycosylation reactions using natural uridine or thymidine as sugar donors. Reactions were performed at 60 or 80 °C and at pH 9 under hypoxic conditions to improve the solubility and stability of the 2-Se-nucleobases in aqueous media. To optimize the conversion, the reaction equilibria in analytical transglycosylation reactions were studied. The equilibrium constants of phosphorolysis of the 2-Se-pyrimidines were between 5 and 10, and therefore differ by an order of magnitude from the equilibrium constants of any other known case. Hence, the thermodynamic properties of the target nucleosides are inherently unfavorable, and this complicates their synthesis significantly. A tenfold excess of sugar donor was needed to achieve 40-48 % conversion to the target nucleoside. Scale-up of the optimized conditions provided four Se-containing nucleosides in 6-40 % isolated yield, which compares favorably to established chemical routes.


Asunto(s)
Nucleósidos/biosíntesis , Pentosiltransferasa/metabolismo , Timidina/análogos & derivados , Biocatálisis , Glicosilación , Estructura Molecular , Compuestos de Organoselenio/química , Termodinámica , Timidina/biosíntesis , Timidina/química
2.
PLoS One ; 13(8): e0202384, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30142195

RESUMEN

INTRODUCTION: Successful inhibition of thymidylate synthase (TS) by pemetrexed, a TS inhibitor, results in a reproducible transient burst or "flare" in thymidine salvage pathway activity at 2 hrs. of therapy which can be measurable with FLT-PET ([18F]fluorothymidine-positron emission tomography) in non-small cell lung cancer (NSCLC). Routine administration of dexamethasone with pemetrexed-based therapy could potentially confound this imaging approach since dexamethasone is known to inhibit expression of thymidine kinase 1, a key enzyme in the thymidine salvage pathway. Here we examine the potential impact of dexamethasone on the TS inhibition-mediated thymidine salvage pathway "flare" in NSCLC. MATERIALS AND METHODS: In order to determine NSCLC cell line sensitivity to dexamethasone and pemetrexed, IC50 studies were performed on NSCLC cell lines H23, H1975, H460, H1299. TS inhibition-mediated "flare" in thymidine salvage pathway activity was then measured at 2hrs. of exposure to pemetrexed and cisplatin in NSCLC cells lines following using 3H-thymidine incorporation assays under the following conditions: control (no chemotherapy or dexamethasone), or treated with pemetrexed and cisplatin without dexamethasone, with 24 hrs. pre-treatment of dexamethasone or with dexamethasone administered together with chemotherapy. These conditions were chosen to model the delivery of pemetrexed-based therapy in the clinic. RESULTS: The IC50 of H23, H1975, H460, H1299 for dexamethasone and pemetrexed were 40, 5.9, 718, 362 µM and 0.22, 0.73, 0.14 and 0.66 µM respectively. Significant blunting of the thymidine salvage pathway "flare" is observed at 2hrs. of pemetrexed-based therapy when dexamethasone sensitive cell lines H23 and H1975 were pretreated with dexamethasone but not when dexamethasone was given together with pemetrexed therapy or in the setting of dexamethasone resistance (H460 and H1299). CONCLUSION: 24 hr. pretreatment with dexamethasone, but not same day co-administration of dexamethasone with therapy, impairs the TS inhibition-mediated "flare" in thymidine salvage pathway activity in NSCLC.


Asunto(s)
Carcinoma de Pulmón de Células no Pequeñas/tratamiento farmacológico , Dexametasona/farmacología , Inhibidores Enzimáticos/farmacología , Neoplasias Pulmonares/tratamiento farmacológico , Timidina/biosíntesis , Timidilato Sintasa/antagonistas & inhibidores , Células A549 , Carcinoma de Pulmón de Células no Pequeñas/enzimología , Carcinoma de Pulmón de Células no Pequeñas/patología , Humanos , Neoplasias Pulmonares/enzimología , Neoplasias Pulmonares/patología , Timidilato Sintasa/metabolismo , Factores de Tiempo
3.
Cancer Med ; 6(7): 1639-1651, 2017 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-28608446

RESUMEN

Here, we examined the potential of blocking the thymidine de novo synthesis pathways for sensitizing melanoma cells to the nucleoside salvage pathway targeting endogenous DNA irradiation. Expression of key nucleotide synthesis and proliferation enzymes thymidylate synthase (TS) and thymidine kinase 1 (TK1) was evaluated in differentiated (MITFhigh [microphthalmia-associated transcription factor] IGR1) and invasive (MITFmedium IGR37) melanoma cells. For inhibition of de novo pathways cells were incubated either with an irreversible TS inhibitor 5-fluoro-2'-deoxyuridine (FdUrd) or with a competitive dihydrofolate-reductase (DHFR) inhibitor methotrexate (MTX). Salvage pathway was addressed by irradiation-emitting thymidine analog [123/125 I]-5-iodo-4'-thio-2'-deoxyuridine (123/125 I-ITdU). The in vivo targeting efficiency was visualized by single-photon emission computed tomography. Pretreatment with FdUrd strongly increased the cellular uptake and the DNA incorporation of 125 I-ITdU into the mitotically active IGR37 cells. This effect was less pronounced in the differentiated IGR1 cells. In vivo, inhibition of TS led to a high and preferential accumulation of 123 I-ITdU in tumor tissue. This preclinical study presents profound rationale for development of therapeutic approach by highly efficient and selective radioactive targeting one of the crucial salvage pathways in melanomas.


Asunto(s)
Antineoplásicos/farmacología , Vías Biosintéticas/efectos de los fármacos , Melanoma/metabolismo , Timidina/biosíntesis , Animales , Antineoplásicos/uso terapéutico , Biomarcadores , Vías Biosintéticas/efectos de la radiación , Puntos de Control del Ciclo Celular/efectos de los fármacos , Puntos de Control del Ciclo Celular/efectos de la radiación , Línea Celular Tumoral , Proliferación Celular/efectos de los fármacos , Glutatión/metabolismo , Humanos , Radioisótopos de Yodo , Melanoma/diagnóstico por imagen , Melanoma/tratamiento farmacológico , Melanoma/patología , Ratones , Mitosis/efectos de los fármacos , Mitosis/genética , Imagen Molecular , Terapia Molecular Dirigida , Nucleósidos/metabolismo , Oxidación-Reducción , Radiación , Transducción de Señal/efectos de los fármacos , Transducción de Señal/efectos de la radiación
4.
Biochem Biophys Res Commun ; 477(3): 374-82, 2016 08 26.
Artículo en Inglés | MEDLINE | ID: mdl-27338638

RESUMEN

We found that non-small cell lung cancer (NSCLC) is remarkably sensitive to the regulation of glutamine supply by testing the metabolic dependency of 11 cancer cell lines against regulation of glycolysis, autophagy, fatty acid synthesis, and glutamine supply. Glutamine is known as a key supplement of cancer cell growth that is converted to α-ketoglutarate for anabolic biogenesis via glutamate by glutaminase 1 (GLS1). GLS1 inhibition using 10 µM of bis-2-(5-phenylacetamido-1,3,4-thiadiazol-2-yl)ethyl sulfide (BPTES) showed about 50% cell growth arrest by SRB assay. By testing the synergistic effects of conventional therapeutics, BPTES combined with 5-fluorouracil (5-FU), an irreversible inhibitor of thymidylate synthase, significant effects were observed on cell growth arrest in NSCLC. We found that GLS1 inhibition using BPTES reduced metabolic intermediates including thymidine and carbamoyl phosphate. Reduction of thymidine and carbamoyl-phosphate synthesis by BPTES treatment exacerbated pyrimidine supply by combination with 5-FU, which induced cell death synergistically in NSCLC.


Asunto(s)
Carcinoma de Pulmón de Células no Pequeñas/metabolismo , Glutaminasa/antagonistas & inhibidores , Neoplasias Pulmonares/metabolismo , Timidina/biosíntesis , Carcinoma de Pulmón de Células no Pequeñas/enzimología , Línea Celular Tumoral , Humanos , Neoplasias Pulmonares/enzimología
5.
Nat Chem Biol ; 12(6): 452-8, 2016 06.
Artículo en Inglés | MEDLINE | ID: mdl-27110680

RESUMEN

Serine is both a proteinogenic amino acid and the source of one-carbon units essential for de novo purine and deoxythymidine synthesis. In the canonical pathway of glucose-derived serine synthesis, Homo sapiens phosphoglycerate dehydrogenase (PHGDH) catalyzes the first, rate-limiting step. Genetic loss of PHGDH is toxic toward PHGDH-overexpressing breast cancer cell lines even in the presence of exogenous serine. Here, we used a quantitative high-throughput screen to identify small-molecule PHGDH inhibitors. These compounds reduce the production of glucose-derived serine in cells and suppress the growth of PHGDH-dependent cancer cells in culture and in orthotopic xenograft tumors. Surprisingly, PHGDH inhibition reduced the incorporation into nucleotides of one-carbon units from glucose-derived and exogenous serine. We conclude that glycolytic serine synthesis coordinates the use of one-carbon units from endogenous and exogenous serine in nucleotide synthesis, and we suggest that one-carbon unit wasting thus may contribute to the efficacy of PHGDH inhibitors in vitro and in vivo.


Asunto(s)
Carbono/metabolismo , Inhibidores Enzimáticos/farmacología , Fosfoglicerato-Deshidrogenasa/antagonistas & inhibidores , Serina/biosíntesis , Bibliotecas de Moléculas Pequeñas/farmacología , Animales , Carbono/química , Proliferación Celular/efectos de los fármacos , Relación Dosis-Respuesta a Droga , Inhibidores Enzimáticos/química , Femenino , Glucólisis/efectos de los fármacos , Humanos , Neoplasias Mamarias Experimentales/tratamiento farmacológico , Neoplasias Mamarias Experimentales/enzimología , Neoplasias Mamarias Experimentales/metabolismo , Neoplasias Mamarias Experimentales/patología , Ratones , Estructura Molecular , Fosfoglicerato-Deshidrogenasa/metabolismo , Purinas/biosíntesis , Serina/química , Bibliotecas de Moléculas Pequeñas/química , Relación Estructura-Actividad , Timidina/biosíntesis , Células Tumorales Cultivadas , Ensayos Antitumor por Modelo de Xenoinjerto
6.
Sheng Wu Gong Cheng Xue Bao ; 31(1): 105-14, 2015 Jan.
Artículo en Chino | MEDLINE | ID: mdl-26021084

RESUMEN

Thymidine is a commercially useful precursor for production of antiviral compounds such as stavudine and azidothymidine. Biosynthesis of thymidine by Escherichia coli BL21 (DE3) was studied using metabolic engineering methods. The deoA, tdk and udp of the salvage pathway were disrupted from E. coli BL21 to construct BS03 that produced 21.6 mg thymidine per liter. Additional deletion of pgi and pyrL increased the supply of thymidine precursors and the resulting strain BS05 produced 90.5 mg thymidine/L. At last, ushA, thyA, dut, ndk, nrdA and nrdB of thymidine biosynthetic pathway were overexpressed, and the resulting strain BS08 produced 272 mg thymidine/L. In fed-batch fermentation, BS08 accumulated 1248.8 mg thymidine/L. Metabolically engineered strain E. coli has potential applications for thymidine production.


Asunto(s)
Escherichia coli/metabolismo , Ingeniería Metabólica , Timidina/biosíntesis , Vías Biosintéticas , Escherichia coli/genética , Fermentación , Microbiología Industrial
7.
J Virol ; 87(17): 9411-9, 2013 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-23824813

RESUMEN

Dengue virus has emerged as a global health threat to over one-third of humankind. As a positive-strand RNA virus, dengue virus relies on the host cell metabolism for its translation, replication, and egress. Therefore, a better understanding of the host cell metabolic pathways required for dengue virus infection offers the opportunity to develop new approaches for therapeutic intervention. In a recently described screen of known drugs and bioactive molecules, we observed that methotrexate and floxuridine inhibited dengue virus infections at low micromolar concentrations. Here, we demonstrate that all serotypes of dengue virus, as well as West Nile virus, are highly sensitive to both methotrexate and floxuridine, whereas other RNA viruses (Sindbis virus and vesicular stomatitis virus) are not. Interestingly, flavivirus replication was restored by folinic acid, a thymidine precursor, in the presence of methotrexate and by thymidine in the presence of floxuridine, suggesting an unexpected role for thymidine in flavivirus replication. Since thymidine is not incorporated into RNA genomes, it is likely that increased thymidine production is indirectly involved in flavivirus replication. A possible mechanism is suggested by the finding that p53 inhibition restored dengue virus replication in the presence of floxuridine, consistent with thymidine-less stress triggering p53-mediated antiflavivirus effects in infected cells. Our data reveal thymidine synthesis pathways as new and unexpected therapeutic targets for antiflaviviral drug development.


Asunto(s)
Antivirales/farmacología , Virus del Dengue/efectos de los fármacos , Virus del Dengue/metabolismo , Flavivirus/efectos de los fármacos , Flavivirus/metabolismo , Timidina/biosíntesis , Animales , Línea Celular , Chlorocebus aethiops , Virus ADN/efectos de los fármacos , Virus del Dengue/fisiología , Modelos Animales de Enfermedad , Flavivirus/fisiología , Infecciones por Flavivirus/tratamiento farmacológico , Floxuridina/farmacología , Células HEK293 , Células HeLa , Humanos , Leucovorina/farmacología , Metotrexato/farmacología , Ratones , Ratones de la Cepa 129 , Ratones Endogámicos C57BL , Virus ARN/efectos de los fármacos , Proteína p53 Supresora de Tumor/metabolismo , Células Vero , Replicación Viral/efectos de los fármacos , Virus del Nilo Occidental/efectos de los fármacos , Virus del Nilo Occidental/metabolismo , Virus del Nilo Occidental/fisiología
8.
J Am Chem Soc ; 134(9): 4442-8, 2012 Mar 07.
Artículo en Inglés | MEDLINE | ID: mdl-22295882

RESUMEN

Thymidylate is a DNA nucleotide that is essential to all organisms and is synthesized by the enzyme thymidylate synthase (TSase). Several human pathogens rely on an alternative flavin-dependent thymidylate synthase (FDTS), which differs from the human TSase both in structure and molecular mechanism. It has recently been shown that FDTS catalysis does not rely on an enzymatic nucleophile and that the proposed reaction intermediates are not covalently bound to the enzyme during catalysis, an important distinction from the human TSase. Here we report the chemical trapping, isolation, and identification of a derivative of such an intermediate in the FDTS-catalyzed reaction. The chemically modified reaction intermediate is consistent with currently proposed FDTS mechanisms that do not involve an enzymatic nucleophile, and it has never been observed during any other TSase reaction. These findings establish the timing of the methylene transfer during FDTS catalysis. The presented methodology provides an important experimental tool for further studies of FDTS, which may assist efforts directed toward the rational design of inhibitors as leads for future antibiotics.


Asunto(s)
Flavinas/química , Timidina/biosíntesis , Timidilato Sintasa/metabolismo , Biocatálisis , Humanos , Estructura Molecular , Oxidación-Reducción , Timidina/química , Timidina/aislamiento & purificación , Timidilato Sintasa/química
9.
J Immunol ; 186(7): 4156-63, 2011 Apr 01.
Artículo en Inglés | MEDLINE | ID: mdl-21368236

RESUMEN

The increase in airway smooth muscle (ASM) mass is a major structural change in asthma. This increase has been attributed to ASM cell (ASMC) hyperplasia and hypertrophy. The distance between ASMC and the epithelium is reduced, suggesting migration of smooth muscle cells toward the epithelium. Recent studies have suggested a role of chemokines in ASMC migration toward the epithelium; however, chemokines have other biological effects. The objective of the current study is to test the hypothesis that chemokines (eotaxin, RANTES, IL-8, and MIP-1α) can directly influence ASMC mass by increasing the rate of proliferation or enhancing the survival of these cells. Human ASMCs were exposed to different concentrations of eotaxin, RANTES, IL-8, or MIP-1α. To test for proliferation, matched control and stimulated ASMC were pulsed with [(3)H]thymidine, or ASMCs were stained with BrdU and then analyzed with flow cytometry. Apoptosis was measured using Annexin V staining and flow cytometry. Expression of phosphorylated p42/p44 and MAPKs was assessed by Western blot. In a concentration-dependent manner, chemokines including eotaxin, RANTES, IL-8, and MIP-1α increased ASMC's [(3)H]thymidine incorporation and DNA synthesis. IL-8, eotaxin, and MIP-1α decreased the rate of apoptosis of ASMCs compared with the matched controls. A significant increase in phosphorylated p42/p44 MAPKs was seen after treating ASMCs with RANTES and eotaxin. Moreover, inhibition of p42/p44 MAPK phosphorylation reduced the level of chemokine-induced ASM proliferation. We conclude that chemokines might contribute to airway remodeling seen in asthma by enhancing the number and survival of ASMCs.


Asunto(s)
Remodelación de las Vías Aéreas (Respiratorias)/inmunología , Proliferación Celular , Quimiocina CCL11/fisiología , Quimiocina CCL3/fisiología , Quimiocina CCL5/fisiología , Interleucina-8/fisiología , Miocitos del Músculo Liso/inmunología , Regulación hacia Arriba/inmunología , Apoptosis/inmunología , Asma/inmunología , Asma/metabolismo , Asma/patología , Bronquios/inmunología , Bronquios/metabolismo , Bronquios/patología , Supervivencia Celular/inmunología , Células Cultivadas , Quimiocina CCL11/biosíntesis , Quimiocina CCL3/biosíntesis , Quimiocina CCL5/biosíntesis , Replicación del ADN/inmunología , Regulación hacia Abajo/inmunología , Humanos , Interleucina-8/biosíntesis , Proteína Quinasa 1 Activada por Mitógenos/metabolismo , Proteína Quinasa 1 Activada por Mitógenos/fisiología , Proteína Quinasa 3 Activada por Mitógenos/metabolismo , Proteína Quinasa 3 Activada por Mitógenos/fisiología , Miocitos del Músculo Liso/metabolismo , Miocitos del Músculo Liso/patología , Fosforilación/inmunología , Timidina/biosíntesis , Timidina/metabolismo
10.
Clin Cancer Res ; 17(5): 1099-110, 2011 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-21245090

RESUMEN

PURPOSE: To determine whether treatment response to the Aurora B kinase inhibitor, AZD1152, could be monitored early in the course of therapy by noninvasive [(18)F]-labeled fluoro-2-deoxyglucose, [(18)F]FDG, and/or 3'-deoxy-3'-[(18)F]fluorothymidine, [(18)F]FLT, PET imaging. EXPERIMENTAL DESIGN: AZD1152-treated and control HCT116 and SW620 xenograft-bearing animals were monitored for tumor size and by [(18)F]FDG, and [(18)F]FLT PET imaging. Additional studies assessed the endogenous and exogenous contributions of thymidine synthesis in the two cell lines. RESULTS: Both xenografts showed a significant volume-reduction to AZD1152. In contrast, [(18)F]FDG uptake did not demonstrate a treatment response. [(18)F]FLT uptake decreased to less than 20% of control values in AZD1152-treated HCT116 xenografts, whereas [(18)F]FLT uptake was near background levels in both treated and untreated SW620 xenografts. The EC(50) for AZD1152-HQPA was approximately 10 nmol/L in both SW620 and HCT116 cells; in contrast, SW620 cells were much more sensitive to methotrexate (MTX) and 5-Fluorouracil (5FU) than HCT116 cells. Immunoblot analysis demonstrated marginally lower expression of thymidine kinase in SW620 compared with HCT116 cells. The aforementioned results suggest that SW620 xenografts have a higher dependency on the de novo pathway of thymidine utilization than HCT116 xenografts. CONCLUSIONS: AZD1152 treatment showed antitumor efficacy in both colon cancer xenografts. Although [(18)F]FDG PET was inadequate in monitoring treatment response, [(18)F]FLT PET was very effective in monitoring response in HCT116 xenografts, but not in SW620 xenografts. These observations suggest that de novo thymidine synthesis could be a limitation and confounding factor for [(18)F]FLT PET imaging and quantification of tumor proliferation, and this may apply to some clinical studies as well.


Asunto(s)
Neoplasias del Colon/diagnóstico por imagen , Didesoxinucleósidos , Fluorodesoxiglucosa F18 , Organofosfatos/uso terapéutico , Tomografía de Emisión de Positrones/métodos , Quinazolinas/uso terapéutico , Animales , Antineoplásicos/uso terapéutico , Línea Celular Tumoral , Neoplasias del Colon/tratamiento farmacológico , Radioisótopos de Flúor , Fluorouracilo/uso terapéutico , Células HCT116 , Humanos , Immunoblotting , Antígeno Ki-67/análisis , Metotrexato/uso terapéutico , Ratones , Ratones Desnudos , Radiofármacos , Timidina/biosíntesis , Timidina Quinasa/genética , Ensayos Antitumor por Modelo de Xenoinjerto
11.
Biotechnol Lett ; 33(1): 71-8, 2011 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-20872160

RESUMEN

PURPOSE OF WORK: Thymidine is an important precursor in antiviral drugs. We have enhanced thymidine production in E. coli by eliminating the repressors in the transcription of the gene coding for carbamoyl phosphate synthetase. The operon for carbamoyl phosphate synthetase (CarAB) in the thymidine biosynthesis regulatory pathway was derepressed by disrupting three known repressors (purR, pepA and argR). Combinatorial disruption of three repressors increased CarA expression levels in accordance with degree of disruption, which had a positive correlation with thymidine production. By simultaneous disruption of three repressors (BLdtugRPA), CarA expression level was increased by 3-fold compared to the parental strain, leading to an increased thymidine yield from 0.25 to 1.1 g thymidine l(-1). From BLdtugRPA, we established BLdtugRPA24 by transforming two plasmids expressing enzymes in the thymidine biosynthetic pathway and obtained 5.2 g thymidine l(-1) by Ph-stat fed-batch fermentation.


Asunto(s)
Carbamoil-Fosfato Sintasa (Glutamina-Hidrolizante)/metabolismo , Escherichia coli/metabolismo , Regulación Bacteriana de la Expresión Génica , Regulación Enzimológica de la Expresión Génica , Operón , Timidina/biosíntesis , Escherichia coli/genética , Técnicas de Inactivación de Genes , Proteínas Represoras/genética
12.
Anticancer Res ; 29(10): 3925-30, 2009 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-19846930

RESUMEN

BACKGROUND: Low 5-fluorouracil (5-FU) concentrations cause a significant increase in DNA synthesis in mitogen-activated human lymphocytes. MATERIALS AND METHODS: We explored 2.5 microM 5-FU-induced DNA synthesis by testing 5-FU activity in hypoxanthine-aminopterin-thymidine (HAT)-containing medium, and its effect on thymidylate synthase (TS) activity and CD25 expression in interleukin (IL)-2-activated human peripheral blood mononuclear cells (PBMCs) and the combined effects with prostaglandin E(2) (PGE(2)) and transforming growth factor (TGF)-beta3. RESULTS: The co-stimulatory effect of 2.5 microM 5-FU on DNA synthesis was abrogated in HAT-cultured medium. 5-FU substantially reduced TS activity by 50% in IL-2-activated PBMCs. 5-FU combined with TGF-beta3 and PGE(2) did not alter their inhibitory effects on IL-2-activated natural killer cell cytotoxicity, but substantially affected increased DNA synthesis of cells cultured in IL-2 and co-cultured with 10 ng/ml TGF-beta3 and 10 microM PGE(2). CONCLUSION: Low 5-FU concentrations increase DNA synthesis in lymphocytes and exert a co-stimulatory activity on TGF-beta3 and PGE(2) modulation of IL-2-activated lymphocytes.


Asunto(s)
ADN/biosíntesis , Dinoprostona/farmacología , Fluorouracilo/farmacología , Interleucina-2/farmacología , Linfocitos/efectos de los fármacos , Linfocitos/inmunología , Factor de Crecimiento Transformador beta3/farmacología , Ciclo Celular/efectos de los fármacos , Células Cultivadas , Medios de Cultivo , Citotoxicidad Inmunológica/efectos de los fármacos , ADN/sangre , Interacciones Farmacológicas , Humanos , Activación de Linfocitos/efectos de los fármacos , Linfocitos/metabolismo , Receptores de Interleucina-2/biosíntesis , Receptores de Interleucina-2/sangre , Timidina/biosíntesis , Timidina/sangre
13.
Biotechnol Lett ; 31(12): 1929-36, 2009 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-19774345

RESUMEN

Abstract Intracellular NADPH/NADP+ ratio in cells grown on various production media with different carbon and nitrogen sources had a positive correlation with the thymidine production. To improve thymidine production in a previously engineered E. coli strain, NAD+ kinase was overexpressed in it resulting in the NADPH/NADP+ ratio shifting from 0.184 to 0.267. The [NADH + NADP+]/[NAD+ + NADPH] ratio was, however, not significantly altered. In jar fermentation, 740 mg thymidine l-1 was produced in parental strain, while 940 mg l-1 of thymidine was produced in NAD+ kinase-expressing strain.


Asunto(s)
Escherichia coli/enzimología , Escherichia coli/metabolismo , Fosfotransferasas (Aceptor de Grupo Alcohol)/genética , Fosfotransferasas (Aceptor de Grupo Alcohol)/metabolismo , Timidina/biosíntesis , Carbono/metabolismo , Medios de Cultivo/química , Escherichia coli/genética , Fermentación , Dosificación de Gen , Nitrógeno/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
14.
Appl Environ Microbiol ; 75(8): 2423-32, 2009 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-19251902

RESUMEN

Thymidine is an important precursor in the production of various antiviral drugs, including azidothymidine for the treatment of AIDS. Since thymidine-containing nucleotides are synthesized only by the de novo pathway during DNA synthesis, it is not easy to produce a large amount of thymidine biologically. In order to develop a host strain to produce thymidine, thymidine phosphorylase, thymidine kinase, and uridine phosphorylase genes were deleted from an Escherichia coli BL21 strain to develop BLdtu. Since the genes coding for the enzymes related to the nucleotide salvage pathway were disrupted, BLdtu was unable to utilize thymidine or thymine, and thymidine degradation activity was completely abrogated. We additionally expressed T4 thymidylate synthase, T4 nucleotide diphosphate reductase, bacteriophage PBS2 TMP phosphohydrolase, E. coli dCTP deaminase, and E. coli uridine kinase in the BLdtu strain to develop a thymidine-producing strain (BLdtu24). BLdtu24 produced 649.3 mg liter(-1) of thymidine in a 7-liter batch fermenter for 24 h, and neither thymine nor uridine was detected. However, the dUTP/dTTP ratio was increased in BLdtu24, which could lead to increased double-strand breakages and eventually to cell deaths during fermentation. To enhance thymidine production and to prevent cell deaths during fermentation, we disrupted a gene (encoding uracil-DNA N-glycosylase) involved in DNA excision repair to suppress the consumption of dTTP and developed BLdtug24. Compared with the thymidine production in BLdtu24, the thymidine production in BLdtug24 was increased by approximately 1.2-fold (740.3 mg liter(-1)). Here, we show that a thymidine-producing strain with a relatively high yield can be developed using a metabolic engineering approach.


Asunto(s)
Escherichia coli/metabolismo , Timidina/biosíntesis , Bacteriófago T4/genética , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Fermentación , Eliminación de Gen , Expresión Génica , Proteínas Virales/genética
15.
J Bacteriol ; 190(6): 2056-64, 2008 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-18192395

RESUMEN

A novel FAD-dependent thymidylate synthase, ThyX, is present in a variety of eubacteria and archaea, including the mycobacteria. A short motif found in all thyX genes, RHRX(7-8)S, has been identified. The three-dimensional structure of the Mycobacterium tuberculosis ThyX enzyme has been solved. Building upon this information, we used directed mutagenesis to produce 67 mutants of the M. tuberculosis thyX gene. Each enzyme was assayed to determine its ability to complement the defect in thymidine biosynthesis in a delta thyA strain of Escherichia coli. Enzymes from selected strains were then tested in vitro for their ability to catalyze the oxidation of NADPH and the release of a proton from position 5 of the pyrimidine ring of dUMP. The results defined an extended motif of amino acids essential to enzyme activity in M. tuberculosis (Y44X(24)H69X(25)R95HRX(7)S105XRYX(90)R199 [with the underlined histidine acting as the catalytic residue and the underlined serine as the nucleophile]) and provided insight into the ThyX reaction mechanism. ThyX is found in a variety of bacterial pathogens but is absent in humans, which depend upon an unrelated thymidylate synthase, ThyA. Therefore, ThyX is a potential target for development of antibacterial drugs.


Asunto(s)
Proteínas Bacterianas/metabolismo , Flavina-Adenina Dinucleótido/metabolismo , Timidilato Sintasa/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Aminoácidos/genética , Aminoácidos/metabolismo , Proteínas Bacterianas/genética , Proteínas Bacterianas/fisiología , Nucleótidos de Desoxiuracil/química , Nucleótidos de Desoxiuracil/metabolismo , Electroforesis en Gel de Poliacrilamida , Escherichia coli/genética , Escherichia coli/metabolismo , Prueba de Complementación Genética , Modelos Moleculares , Datos de Secuencia Molecular , Estructura Molecular , Mutación , Mycobacterium tuberculosis/enzimología , Mycobacterium tuberculosis/genética , NADP/química , NADP/metabolismo , Estructura Terciaria de Proteína , Homología de Secuencia de Aminoácido , Timidina/biosíntesis , Timidina/química , Timidina/metabolismo , Timidilato Sintasa/química , Timidilato Sintasa/genética
16.
Can J Microbiol ; 53(8): 1011-5, 2007 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-17898858

RESUMEN

The preg gene encodes a cyclin-like protein that is implicated in the derepression of nucleases and phosphatases that scavenge phosphate from the environment. To better understand the regulatory role of the preg gene product, the differential display reverse transcriptase - polymerase chain reaction was used to isolate transcripts differentially expressed in the pregc mutant strain of the mold Neurospora crassa grown under phosphate starvation, at pH 7.8. Two transcripts, whose differential expressions were confirmed by Northern blotting, were downregulated in a strain of N. crassa carrying a loss-of-function mutation in the preg gene (preg(c) allele). These transcripts revealed genes coding for enzymes involved in the thymidine salvage pathway (iso-orotate decarboxylase) and in the biosynthesis of coenzyme Q (ubiquinone C-methyltransferase), which may be relevant to a further understanding of the molecular events involved in the phosphorus sensing in N. crassa.


Asunto(s)
Carboxiliasas/genética , Proteínas Fúngicas/genética , Mutación , Neurospora crassa/genética , Fosfatos/deficiencia , Timidina/biosíntesis , Northern Blotting , Carboxiliasas/metabolismo , Proteínas Fúngicas/metabolismo , Regulación Enzimológica de la Expresión Génica/efectos de los fármacos , Regulación Fúngica de la Expresión Génica/efectos de los fármacos , Concentración de Iones de Hidrógeno , Neurospora crassa/efectos de los fármacos , Neurospora crassa/metabolismo , Fosfatos/farmacología , Transcripción Genética/efectos de los fármacos
17.
Appl Microbiol Biotechnol ; 74(2): 282-9, 2007 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-17216455

RESUMEN

The two long-known "classical" enzymes of uridyl-5-methylation, thymidylate synthase and ribothymidyl synthase, have been joined by two alternative methylation enzymes, flavin-dependent thymidylate synthase and folate-dependent ribothymidyl synthase. These two newly discovered enzymes have much in common: both contain flavin cofactors, utilize methylenetetrahydrofolate as a source of methyl group, and perform thymidylate synthesis via chemical pathways distinct from those of their classic counterparts. Several severe human pathogens (e.g., typhus, anthrax, tuberculosis, and more) depend on these "alternative" enzymes for reproduction. These and other distinctive properties make the alternative enzymes and their corresponding genes appealing targets for new antibiotics.


Asunto(s)
Antibacterianos/farmacología , Metiltransferasas/antagonistas & inhibidores , Timidina/biosíntesis , Timidilato Sintasa/antagonistas & inhibidores , Diseño de Fármacos , Inhibidores Enzimáticos/farmacología , Flavinas/metabolismo , Ácido Fólico/metabolismo , Humanos , Metiltransferasas/química , Metiltransferasas/metabolismo , Timidilato Sintasa/química , Timidilato Sintasa/metabolismo
18.
Mol Cell Biochem ; 289(1-2): 111-24, 2006 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-16823516

RESUMEN

Extracellular ATP (ATPo) is capable of inducing different events on cells through receptor activation. The effect produced by ATPo was studied in the cell line K562 and its multidrug resistant (MDR) counterpart, Lucena 1. Lower ATPo concentrations (1 mM and 2.5 mM) led to high (3)H-thymidine incorporation but no increase in cell number. Similarly, the cell cycle profile indicated an increase of cells in S phase and a decrease in G1 and G2, suggesting that the cells did not duplicate their DNA content. Higher doses of ATP (5 mM and 10 mM), as well as UTP (5 mM) and the P2X(7) agonist BzATP, were cytotoxic. However, no expression of P2X(7) receptors could be detected by Western Blot nor were the cells permeabilised by ATP, suggesting that pore formation was not involved in cell death. Both ecto-ATPase and ecto-5'-nucleotidase activity could be demonstrated at the surfaces of K562 and Lucena 1 cells, the latter presenting a higher ecto-5'-nucleotidase activity. Adenosine induced cell death at lower concentrations (2.5 mM) on both cell lines. Furthermore, an increased number of dead cells could be observed when 5 mM Adenosine was used compared to the same concentrations of ATPo. It still remains to be elucidated the nature of the receptors involved in the induction of cell death in these cells.


Asunto(s)
Adenosina Trifosfato/farmacología , Resistencia a Múltiples Medicamentos/efectos de los fármacos , 5'-Nucleotidasa/metabolismo , Miembro 1 de la Subfamilia B de Casetes de Unión a ATP/metabolismo , Adenosina/farmacología , Adenosina Trifosfatasas/metabolismo , Apoptosis/efectos de los fármacos , Apirasa/metabolismo , Ciclo Celular/efectos de los fármacos , Permeabilidad de la Membrana Celular/efectos de los fármacos , Supervivencia Celular/efectos de los fármacos , Humanos , Células K562 , Cinética , Fenotipo , Unión Proteica/efectos de los fármacos , Agonistas del Receptor Purinérgico P2 , Antagonistas del Receptor Purinérgico P2 , Receptores Purinérgicos P2X7 , Timidina/biosíntesis , Tritio , Células Tumorales Cultivadas , Uridina Trifosfato/farmacología
19.
Biochem Biophys Res Commun ; 342(1): 221-6, 2006 Mar 31.
Artículo en Inglés | MEDLINE | ID: mdl-16472778

RESUMEN

Secretion of thymidine appeared to be a common property of hybridoma and myeloma cells, but not of other cell types, which were tested. Of three hybridoma cell lines tested, all secreted thymidine in amounts resulting in the accumulation of thymidine to concentrations of 10-20microM in the culture medium. Also three of five myeloma cell lines that were analyzed secrete thymidine, but none of the other cell types that were studied. Thymidine was purified to homogeneity (4mg purified from 3l of culture medium) and identified as such by nuclear magnetic resonance spectroscopy. The cells that secreted thymidine showed high resistance to the growth inhibitory effect of thymidine.


Asunto(s)
Hibridomas/metabolismo , Mieloma Múltiple/metabolismo , Timidina/metabolismo , Animales , Línea Celular , Proliferación Celular/efectos de los fármacos , Humanos , Hibridomas/efectos de los fármacos , Espectroscopía de Resonancia Magnética , Ratones , Timidina/biosíntesis , Timidina/farmacología
20.
Int J Cancer ; 110(1): 145-9, 2004 May 20.
Artículo en Inglés | MEDLINE | ID: mdl-15054880

RESUMEN

Intratumoural (i.t.) injection of radio-iododeoxyuridine (IdUrd), a thymidine (dThd) analogue, is envisaged for targeted Auger electron- or beta-radiation therapy of glioblastoma. Here, biodistribution of [(125)I]IdUrd was evaluated 5 hr after i.t. injection in subcutaneous human glioblastoma xenografts LN229 after different intravenous (i.v.) pretreatments with fluorodeoxyuridine (FdUrd). FdUrd is known to block de novo dThd synthesis, thus favouring DNA incorporation of radio-IdUrd. Results showed that pretreatment with 2 mg/kg FdUrd i.v. in 2 fractions 0.5 hr and 1 hr before injection of radio-IdUrd resulted in a mean tumour uptake of 19.8% of injected dose (% ID), representing 65.3% ID/g for tumours of approx. 0.35 g. Tumour uptake of radio-IdUrd in non-pretreated mice was only 4.1% ID. Very low uptake was observed in normal nondividing and dividing tissues with a maximum concentration of 2.9% ID/g measured in spleen. Pretreatment with a higher dose of FdUrd of 10 mg/kg prolonged the increased tumour uptake of radio-IdUrd up to 5 hr. A competition experiment was performed in FdUrd pretreated mice using i.t. co-injection of excess dThd that resulted in very low tumour retention of [(125)I]IdUrd. DNA isolation experiments showed that in the mean >95% of tumour (125)I activity was incorporated in DNA. In conclusion, these results show that close to 20% ID of radio-IdUrd injected i.t. was incorporated in tumour DNA after i.v. pretreatment with clinically relevant doses of FdUrd and that this approach may be further exploited for diffusion and therapy studies with Auger electron- and/or beta-radiation-emitting radio-IdUrd.


Asunto(s)
Neoplasias Encefálicas/radioterapia , ADN/metabolismo , Glioblastoma/radioterapia , Idoxuridina/uso terapéutico , Radioisótopos de Yodo/uso terapéutico , Timidina/biosíntesis , Animales , Neoplasias Encefálicas/metabolismo , Floxuridina/uso terapéutico , Glioblastoma/metabolismo , Humanos , Idoxuridina/farmacocinética , Ratones , Trasplante de Neoplasias , Distribución Tisular , Trasplante Heterólogo
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