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1.
Mitochondrial DNA B Resour ; 8(9): 985-988, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37746033

RESUMO

Prionospio Malmgren 1867 is one of the abundant genera of the family Spionidae Grube, 1850. Despite its rich diversity, information on their complete mitochondrial genome has remained unknown. In this study, we determined the complete mitochondrial genome of a spionid polychaete, Prionospio cf. japonica Okuda 1935. The specimen was collected from the fine sand in the intertidal zone of South Korea. The mitogenome consists of 15,267 base pairs, harboring 13 protein-coding genes (PCGs), 22 transfer RNAs, and two ribosomal RNAs. The maximum-likelihood phylogenetic tree based on the 11 PCGs showed that Prionospio cf. japonica grouped with other spionid polychaetes and formed a monophyletic group. Also, the mtDNA of P. cf. japonica was more closely related to that of non-polydorin spionid, Marenzelleria neglecta, than polydorin spionids. The molecular data will be valuable for studying evolutionary relationships among annelids.

2.
Zookeys ; 1141: 185-199, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37234968

RESUMO

A new monogonont rotifer, Cephalodellabinoculatasp. nov., was described from a soil sample collected in Korea. The new species is morphologically similar to C.carina but is distinguished by having two frontal eyespots, a vitellarium with eight nuclei, and the shape of its fulcrum. We also described four other cephalodellid species collected in Korea; Cephalodellaauriculata, C.catellina, C.gracilis, and C.tinca. Of these four species, C.gracilis and C.tinca were newly recorded in Korea. We provided the morphological characteristics of the five Cephalodella species along with photographs of trophi observed with a scanning electron microscope. Furthermore, we provided the mitochondrial cytochrome c oxidase subunit I gene sequences of the five species.

3.
Zootaxa ; 5227(2): 194-204, 2023 Jan 05.
Artigo em Inglês | MEDLINE | ID: mdl-37044696

RESUMO

Strongylidium koreanum n. sp., a new soil ciliate from Jeju Island, South Korea, is described based on live observations, protargol impregnation, and molecular analysis of the 18S rRNA gene sequence. It is characterized by the following morphological features: cell outline more or less fusiform, posterior end broader than anterior end; grayish under low magnification; cortical granules absent; 23-32 adoral membranelles; three enlarged frontal cirri; buccal cirrus and postoral ventral cirrus present; 27-42 left and 15-28 right ventral cirri; 23-36 left and 30-46 right marginal cirri; three dorsal kineties; three caudal cirri; and two macronuclear nodules with two or three micronuclei. Phylogenetic analyses show that Strongylidium is monophyletic.


Assuntos
Cilióforos , Solo , Animais , Filogenia , RNA Ribossômico 18S/genética , Cilióforos/genética , República da Coreia
4.
Eur J Protistol ; 86: 125939, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-36375282

RESUMO

The morphology and molecular phylogeny of a new soil ciliate, Keronopsis koreana n. sp., which was discovered in soil from Jindo-gun, South Korea, were investigated. The new species is characterized by the following morphological features: cell more or less ellipsoid or ovoid, both ends broadly rounded; cortical granules irregularly distributed, colorless, 1 µm across; 35-54 adoral membranelles; 12-23 cirri in frontal corona; two frontal and two frontoventral cirral rows; two or three buccal cirri; 23-38 left and 22-37 right marginal cirri; three bipolar dorsal kineties; and two macronuclear nodules and three to five micronuclei. Phylogenetic analyses show that Keronopsis koreana n. sp. is placed within a clade containing K. helluo (type species of Keronopsis) and species belonging to Paraholosticha, Uroleptoides, Parabistichella, Orthoamphisiella, Lamtostyla, and Bistichella in non-dorsomarginalian hypotrichs. Also, the sequences belonging to the Keronopsidae did not cluster together. In addition, a new combination is provided: Parabistichella tasmaniensis (Blatterer and Foissner, 1988) n. comb. (original combination: Keronopsis tasmaniensis).


Assuntos
Cilióforos , Hypotrichida , Filogenia , Solo , Cilióforos/genética , Hypotrichida/genética , República da Coreia
5.
Zoolog Sci ; 39(5): 500-506, 2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-36205371

RESUMO

A new spionid polychaete, Scolelepis (Parascolelepis) brunnea sp. nov., from an intertidal mud flat in Korean waters, is reported. The new species is unique among species of Scolelepis Blainville, 1828 in having conspicuously long, reddish-brown branchiae on the anteriormost chaetigers. The new species is morphologically and genetically most closely related to Scolelepis (Parascolelepis) anterobranchiata Lee and Min, 2022 from Korea. However, the new species differs from the latter by a combination of the following characteristics: presence of reddish-brown pigmentations on anteriormost body, neuropodial hooded hooks appearing from chaetigers 21 to 22, larger size of worms, and three teeth above the main fang of neuropodial hooded hooks. Detailed description and images of the new species, along with three gene regions (cytochrome c oxidase subunit I [COI], 16S ribosomal DNA [16S rDNA], and 18S rDNA), are provided.


Assuntos
Anelídeos , Poliquetos , Animais , Anelídeos/genética , DNA Ribossômico , Complexo IV da Cadeia de Transporte de Elétrons/genética , Poliquetos/genética , República da Coreia
6.
Zootaxa ; 5138(5): 549-562, 2022 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-36095819

RESUMO

A new species of Parabathynellidae (Crustacea, Bathynellacea) was found in the interstitial groundwater of the Yeongsangang River in South Korea. The new species belongs to the genus Eobathynella Birstein and Ljovuschkin, 1964, which previously comprised six species, including two from South Korea. Eobathynella gwangjuensis sp. nov. can be distinguished from its congeners by the absence of setae on the last segment of the thoracopod endopods and by the presence of three finger-like setae on the exopod of male thoracopod VIII. In addition, we present gene sequences of the nuclear 18S rDNA and the mitochondrial cytochrome c oxidase subunit 1 of the new species, which was used to infer phylogenetic relationships with closely related species.


Assuntos
Crustáceos , Animais , Masculino , Filogenia , República da Coreia
7.
Zookeys ; 1088: 81-97, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35437373

RESUMO

Two new species of feather mites are described from two individuals of the black-tailed godwit, Limosalimosa (Linnaeus, 1758), in Korea: Alloptes (Conuralloptes) neolimosaesp. nov. (Analgoidea, Alloptidae) and Phyllochaetalimosae sp. nov. (Pterolichoidea, Syringobiidae). Males of A. (C.) neolimosaesp. nov. are distinguished from A. (C.) limosae in having the hysteronotal shield with a straight anterior margin, setae h2 enlarged and slightly flattened in the basal half, and the terminal lamella monotonously transparent without sclerotized patches; females differ in having legs IV with ambulacral discs extending to or slightly beyond the level of setae f2. The discovery of P.limosae sp. nov. represents the first record of the feather mite genus Phyllochaeta on godwits of the genus Limosa Brisson, 1760 (Scolopacidae, Limosinae). Males of P.limosae sp. nov. are distinguished from P.secunda in having the terminal cleft semi-ovoid with a length-to-width ratio of 1.7, and the terminal membranes with 15 or 16 finger-shaped denticles; females differ in having the hysteronotal shield bearing faint longitudinal striations in the posterior third and lacking lacunae, and setae c1 situated posterior to the level of setae c2. Additionally, we obtained partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI) gene from A. (C.) neolimosaesp. nov. and estimated genetic distances from 10 other Alloptes species based on comparisons of COI sequences.

8.
Zootaxa ; 5092(2): 221-237, 2022 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-35391210

RESUMO

Two new spionid polychaetes of the genus Scolelepis from the intertidal habitats of the Yellow Sea in Korea are described and illustrated. Scolelepis (Parascolelepis) anterobranchiata sp. nov. is characterized by a combination of the following characteristic: palps with smooth globular expansions at the basal part, branchiae appearing in the anterior part of the body, absence of notochaetae in chaetiger 1, notopodial postchaetal lamellae partially fused with branchiae in anterior chaetigers, and neuropodial hooded hooks appearing from chaetigers 1819 with two pairs of teeth surmounting a well-developed main fang. Scolelepis (Scolelepis) rubra sp. nov. can be distinguished from its congeners by the following characteristics: reddish-pink body, presence of notochaetae in chaetiger 1, branchiae approximately twice as long as notopodial postchaetal lamellae, neuropodial bidentate hooded hooks usually appearing from chaetigers 2631, and presence of notopodial hooded hooks in posterior chaetigers. Based on molecular data, the sequences of the two new species showed relatively large genetic distances from other Scolelepis species in COI (15.819.5%) and 16S rDNA (4.915.8%). Morphological variability of prostomial shape in the genus Scolelepis is discussed for the first time.


Assuntos
Anelídeos , Poliquetos , Animais , República da Coreia
9.
Microb Ecol ; 84(4): 1029-1041, 2022 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-34851441

RESUMO

Tigriopus kingsejongensis, a copepod species reported from the King Sejong Station, Antarctica, serves as a valuable food resource in ecosystems. We cultured T. kingsejongensis at three different temperatures (2 °C, 8 °C, and 15 °C) in a laboratory to observe the changes in its fecal pellet microbiome depending on the cultivation temperatures and developmental stages. We observed that the fecal pellet microbiome of the copepod changed with temperature: a lower microbial diversity, higher abundance of the aquatic bacterium Vibrio, and lower abundance of the psychrophilic bacterium Colwellia were noted at higher temperatures. In addition, the fecal pellet microbiome of the copepod changed according to the developmental stage: a lower microbial diversity was noted in egg-attached copepods than in nauplii at 8 °C. We further analyzed three shotgun metagenomes from the fecal pellet samples of T. kingsejongensis at different temperatures and obtained 44 metagenome-assembled genomes (MAGs). We noted that MAGs of V. splendidus D contained glycosyl hydrolases (GHs) encoding chitinases and virulence factors at a higher relative abundance at 15 °C than at lower temperatures. These results indicate that increasing temperature affects the fecal pellet microbiome and the development of copepods. The findings are helpful to understand the changes in cold-adapted copepods and the effect of temperature on their growth.


Assuntos
Copépodes , Microbiota , Animais , Temperatura , Regiões Antárticas , Temperatura Baixa
10.
Zookeys ; 1100: 191-205, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36760395

RESUMO

A new spionid polychaete, Rhynchospioaciliata sp. nov., was discovered in the fine sandy sediments of an intertidal habitat from Korean waters. The new species is considered a simultaneous hermaphrodite, but no brooding embryos were found in any of the specimens collected in this study. This species is unique in the absence of ciliation in the anteriormost chaetigers. Rhynchospioaciliata sp. nov. is morphologically most similar to Rhynchospiofoliosa Imajima, 1991 from Japan in having an elevation on the prostomium, conspicuously large and foliaceous branchiae, and intersegmental lateral pouches. However, the new species differs from the latter by the following characteristics: (1) large and lanceolate notopodial postchaetal lamellae of chaetiger 1, (2) transverse ciliated bands and ciliation on the inner branchiae absent in anteriormost chaetigers, and (3) pygidium with one pair of ventral cirri and numerous elongated dorsolateral cirri. Detailed description and illustrations of the new species are provided with molecular information on mitochondrial cytochrome c oxidase subunit I (COI), 16S ribosomal DNA (rDNA), nuclear 18S rDNA, and 28S rDNA.

11.
Zookeys ; 1117: 53-69, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36761380

RESUMO

A new species of freshwater gammarid, Gammarussomaemulensis sp. nov., was collected from Somaemuldo Island, South Korea. This new species is morphologically characterised by the absence of calceoli in antenna 2, absence of anteroproximal setae on bases in pereopods 6 and 7, outer ramus in uropod 3 with plumose setae on both margins, and a small terminal article of the outer ramus, which is shorter than adjacent spines. A description of the new species and morphological differences from related species are provided in the text. The new species was also compared to related species using partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI) gene. Genetic distances of COI sequences between the new species and related species, consisting of 21.5-26.3% difference, support Gammarussomaemulensis sp. nov. as a valid species. Additionally, a key to identifying Gammarus species in South Korea is provided.

12.
Zookeys ; 1070: 151-164, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34819776

RESUMO

A new spionid polychaete, Spiopigmentata sp. nov., is described from the southern and western coasts of Korea. This new species differs from its congeners by the combination of the following morphological characteristics: the presence of orange-brown pigmentation on the anterior part of the prostomium, black pigmentation on the peristomium and along the body, U-shaped nuchal organs, a comparatively long extension of metameric dorsal ciliated organs, three pairs of white dots per chaetiger, two to three posterior abranchiate chaetigers, and the presence of tridentate neuropodial hooded hooks. The partial 16S ribosomal DNA (rDNA) and nuclear 18S rDNA sequences of the new species and Spio sp. 2 reported by Abe and Sato-Okoshi (2021) from Japan showed high similarity, indicating that these two specimens belong to the same species. A detailed description and illustrations of the new species, together with molecular information, are provided.

13.
Zookeys ; 1061: 109-130, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34707455

RESUMO

We report on the first investigation of feather mites associated with birds living on the Barton Peninsula (King George Island, Antarctica). We found seven feather mite species of the superfamily Analgoidea from four host species. Two new species are described from two charadriiform hosts: Alloptes (Sternalloptes) antarcticussp. nov. (Alloptidae) from Stercorariusmaccormicki Saunders (Stercorariidae), and Ingrassiachionis sp. nov. (Xolalgidae) from Chionisalbus (Gmelin) (Chionidae). Additionally, we provide partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI), which was utilized as a DNA barcode, for all seven feather mite species.

14.
Mitochondrial DNA B Resour ; 6(9): 2646-2647, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34409166

RESUMO

In this study, the complete mitogenome sequence of Korean Boccardiella hamata was determined. This is the first complete mitogenome in the order Spionida. The complete mitogenome of B. hamata is 17,561 bp in length with 12 protein-coding genes (atp8 gene absent), 23 transfer RNAs, 2 ribosomal RNAs, and 1 control region. Interestingly, the gene arrangement of the 12 PCGs of B. hamata is unique, which is very different from that of the other polychaetes currently known. The phylogenetic tree supported the traditional taxonomic position of Spionidae within subclass Sedentaria.

15.
Zookeys ; 1046: 143-155, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34239338

RESUMO

A new parabathynellid bathynellacean species, Hangangbathynella mihoensis sp. nov., was found in the groundwater of the Geumgang River in South Korea. This is the first report of Hangangbathynella from a tributary of the Geumgang River. All previously-reported species were found in the Hangang River and the origins of the two rivers are distinct from each other. The new species can be distinguished from its congeners by the two-segmented mandibular palp and the absence of epipods on thoracopod II. In this study, we provide a description of the new species and an identification table for the genus Hangangbathynella. In addition, we obtained partial sequences of the mitochondrial cytochrome c oxidase subunit I gene for DNA barcoding.

16.
Zootaxa ; 4942(2): zootaxa.4942.2.9, 2021 Mar 12.
Artigo em Inglês | MEDLINE | ID: mdl-33757071

RESUMO

Anteholosticha sigmoidea (Foissner, 1982) Berger, 2003 was isolated from a wet soil sample collected on King George Island, Antarctica. Morphological observations and molecular phylogenetic analyses based on the gene sequences of small subunit ribosomal RNA (18S rRNA) were used to identify the species. Anteholosticha sigmoidea can be divided into two groups: group I (three populations described by Foissner 1982) and group II (described by Foissner 1984) based on the morphological differences. Group I differs from group II by the length of the midventral complex (65.1% vs. 52.5% of the cell length), the number of adoral membranelles (25-28 vs. 16-24), and the number of dorsal bristles in kinety 1 (16 bristles vs. nine bristles). Group I differs from the Antarctica population by the absence/presence of the collecting canals of the contractile vacuole and the number of macronuclear nodules (6-12 vs. 13-19). Group II differs from the Antarctica population by the number of macronuclear nodules (five to nine vs. 13-19); the arrangement of cortical granules (forming longitudinal rows vs. irregularly distributed); the length of the midventral complex (64.7% vs. 53.8% of cell length). In the phylogenetic analyses, A. sigmoidea was not nested with any species, and the gene tree indicated polyphyly of the genus Anteholosticha.


Assuntos
Cilióforos , Animais , Regiões Antárticas , Cilióforos/genética , DNA de Protozoário , Filogenia , RNA Ribossômico 18S/genética
17.
PeerJ ; 9: e10786, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33569255

RESUMO

Pseudocrangonyx Akatsuka & Komai, 1922 is the most diverse group of subterranean amphipods in the groundwater communities of Far East Asia. In Korea, the diversity of the group has been underestimated due to the records of morphological variants of Pseudocrangonyx asiaticus Uéno, 1934. To estimate the species diversity, we analyzed the morphological characteristics and conducted molecular analyses of specimens collected from Korean caves that we treated as morphological variants of P. asiaticus. We described three new subterranean pseudocrangonyctid amphipod species, P. deureunensis sp. nov., P. kwangcheonseonensis sp. nov. , and P. hwanseonensis sp. nov., from the groundwater of limestone caves in South Korea. Additionally, we determined sequences of the nuclear large subunit ribosomal RNA and the mitochondrial cytochrome c oxidase subunit I gene of the new species for molecular analyses. Molecular phylogenetic analyses revealed that the three new species formed a monophylum together with P. joolaei Lee et al., 2020 and P. wonkimi Lee, Tomikawa & Min, 2020, which are species that are endemic to Korean caves.

18.
Eur J Protistol ; 78: 125768, 2021 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-33549970

RESUMO

In a study of marine ciliate diversity, we collected an Anteholosticha monilata-like population from Vietnam. To identify this population, we analyzed its morphology, some morphogenetic stages, and molecular phylogeny. Based on these data, we conclude that the Vietnamese population is new to science. Anteholosticha foissneri n. sp. resembles Anteholosticha monilata-like species considering (1) the number and arrangement of macronuclear nodules and micronuclei; (2) the presence of cortical granules; and (3) the saline habitat. However, the new species can be easily distinguished from these species by the arrangement, color, and shape of the cortical granules. The divisional morphogenesis commences with the de novo proliferation of basal bodies as a single longitudinal patch left of the posteriormost midventral cirral pair. This character state has not been reported before in Anteholosticha (based on check of the available data) and probably reflects a distinct clade within the nuclear small subunit ribosomal RNA gene tree.


Assuntos
Cilióforos/classificação , Morfogênese , Filogenia , Cilióforos/citologia , Cilióforos/genética , DNA de Protozoário/genética , RNA Ribossômico 18S/genética , Especificidade da Espécie , Vietnã
19.
Zookeys ; 960: 1-15, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32884395

RESUMO

A new species of pseudocrangonyctid amphipod, Pseudocrangonyx wonkimi sp. nov., was found in the groundwater of a cave in the southwestern Korean Peninsula. Pseudocrangonyx wonkimi sp. nov. is morphologically most closely related to P. joolaeiLee et al., 2020. However, P. wonkimi is clearly distinguished from P. joolaei by lacking sternal gills, fewer setae on maxilla 1 inner plate, fewer serrate robust setae on the carpus of the gnathopods, lacking bifid setae on the inner ramus of pleopod 3, and fewer articles of rami on pleopod 3. We also determined sequences of mitochondrial cytochrome c oxidase subunit I (COI) of P. wonkimi sp. nov. for molecular diagnosis. From the molecular analysis based on COI sequences, P. wonkimi showed the closest relationship with P. joolaei with 15.1% genetic distance.

20.
Zootaxa ; 4731(3): zootaxa.4731.3.2, 2020 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-32230294

RESUMO

A new subterranean species of pseudocrangonyctid amphipod, Pseudocrangonyx joolaei, is described from the groundwater of a cave in South Korea. Pseudocrangonyx joolaei sp. nov. can be distinguished from its congeners by the number of sternal gills as well as a combination of the antennal sinus, the accessory flagellum of antenna 1, and the terminal article of uropod 3. Molecular phylogenetic analyses based on nuclear 28S rRNA and histone H3, and mitochondrial cytochrome c oxidase subunit I and 16S rRNA genes revealed that P. joolaei sp. nov. formed a clade with P. akatsukai Tomikawa Nakano, 2018 that inhabits limestone caves in the western Honshu island, Japan.


Assuntos
Anfípodes , Animais , Filogenia , RNA Ribossômico 16S , República da Coreia
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