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1.
Biochemistry ; 63(13): 1674-1683, 2024 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-38898603

RESUMO

N-Acetylnorloline synthase (LolO) is one of several iron(II)- and 2-oxoglutarate-dependent (Fe/2OG) oxygenases that catalyze sequential reactions of different types in the biosynthesis of valuable natural products. LolO hydroxylates C2 of 1-exo-acetamidopyrrolizidine before coupling the C2-bonded oxygen to C7 to form the tricyclic loline core. Each reaction requires cleavage of a C-H bond by an oxoiron(IV) (ferryl) intermediate; however, different carbons are targeted, and the carbon radicals have different fates. Prior studies indicated that the substrate-cofactor disposition (SCD) controls the site of H· abstraction and can affect the reaction outcome. These indications led us to determine whether a change in SCD from the first to the second LolO reaction might contribute to the observed reactivity switch. Whereas the single ferryl complex in the C2 hydroxylation reaction was previously shown to have typical Mössbauer parameters, one of two ferryl complexes to accumulate during the oxacyclization reaction has the highest isomer shift seen to date for such a complex and abstracts H· from C7 ∼ 20 times faster than does the first ferryl complex in its previously reported off-pathway hydroxylation of C7. The detectable hydroxylation of C7 in competition with cyclization by the second ferryl complex is not enhanced in 2H2O solvent, suggesting that the C2 hydroxyl is deprotonated prior to C7-H cleavage. These observations are consistent with the coordination of the C2 oxygen to the ferryl complex, which may reorient its oxo ligand, the substrate, or both to positions more favorable for C7-H cleavage and oxacyclization.


Assuntos
Ferro , Ácidos Cetoglutáricos , Ácidos Cetoglutáricos/metabolismo , Ácidos Cetoglutáricos/química , Ferro/metabolismo , Ferro/química , Hidroxilação , Ciclização , Oxigenases/metabolismo , Oxigenases/química , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/química
2.
Biochemistry ; 62(16): 2480-2491, 2023 08 15.
Artigo em Inglês | MEDLINE | ID: mdl-37542461

RESUMO

An aliphatic halogenase requires four substrates: 2-oxoglutarate (2OG), halide (Cl- or Br-), the halogenation target ("prime substrate"), and dioxygen. In well-studied cases, the three nongaseous substrates must bind to activate the enzyme's Fe(II) cofactor for efficient capture of O2. Halide, 2OG, and (lastly) O2 all coordinate directly to the cofactor to initiate its conversion to a cis-halo-oxo-iron(IV) (haloferryl) complex, which abstracts hydrogen (H•) from the non-coordinating prime substrate to enable radicaloid carbon-halogen coupling. We dissected the kinetic pathway and thermodynamic linkage in binding of the first three substrates of the l-lysine 4-chlorinase, BesD. After addition of 2OG, subsequent coordination of the halide to the cofactor and binding of cationic l-Lys near the cofactor are associated with strong heterotropic cooperativity. Progression to the haloferryl intermediate upon the addition of O2 does not trap the substrates in the active site and, in fact, markedly diminishes cooperativity between halide and l-Lys. The surprising lability of the BesD•[Fe(IV)=O]•Cl•succinate•l-Lys complex engenders pathways for decay of the haloferryl intermediate that do not result in l-Lys chlorination, especially at low chloride concentrations; one identified pathway involves oxidation of glycerol. The mechanistic data imply (i) that BesD may have evolved from a hydroxylase ancestor either relatively recently or under weak selective pressure for efficient chlorination and (ii) that acquisition of its activity may have involved the emergence of linkage between l-Lys binding and chloride coordination following the loss of the anionic protein-carboxylate iron ligand present in extant hydroxylases.


Assuntos
Cloretos , Lisina , Oxigenases de Função Mista/química , Ferro/química , Oxirredução , Oxigênio/química
3.
bioRxiv ; 2023 May 02.
Artigo em Inglês | MEDLINE | ID: mdl-37205437

RESUMO

An aliphatic halogenase requires four substrates: 2-oxoglutarate (2OG), halide (Cl - or Br - ), the halogenation target ("prime substrate"), and dioxygen. In well-studied cases, the three non-gaseous substrates must bind to activate the enzyme's Fe(II) cofactor for efficient capture of O 2 . Halide, 2OG, and (lastly) O 2 all coordinate directly to the cofactor to initiate its conversion to a cis -halo-oxo-iron(IV) (haloferryl) complex, which abstracts hydrogen (H•) from the non-coordinating prime substrate to enable radicaloid carbon-halogen coupling. We dissected the kinetic pathway and thermodynamic linkage in binding of the first three substrates of the l -lysine 4-chlorinase, BesD. After 2OG adds, subsequent coordination of the halide to the cofactor and binding of cationic l -Lys near the cofactor are associated with strong heterotropic cooperativity. Progression to the haloferryl intermediate upon addition of O 2 does not trap the substrates in the active site and, in fact, markedly diminishes cooperativity between halide and l -Lys. The surprising lability of the BesD•[Fe(IV)=O]•Cl•succinate• l -Lys complex engenders pathways for decay of the haloferryl intermediate that do not result in l -Lys chlorination, especially at low chloride concentrations; one identified pathway involves oxidation of glycerol. The mechanistic data imply that (i) BesD may have evolved from a hydroxylase ancestor either relatively recently or under weak selective pressure for efficient chlorination and (ii) that acquisition of its activity may have involved the emergence of linkage between l -Lys binding and chloride coordination following loss of the anionic protein-carboxylate iron ligand present in extant hydroxylases.

4.
Methods Mol Biol ; 2648: 123-154, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37039989

RESUMO

Nonheme diiron enzymes harness the chemical potential of oxygen to catalyze challenging reactions in biology. In their resting state, these enzymes have a diferrous cofactor that is coordinated by histidine and carboxylate ligands. Upon exposure to oxygen, the cofactor oxidizes to its diferric state forming a peroxo- adduct, capable of catalyzing a wide range of oxidative chemistries such as desaturation and heteroatom oxidation. Despite their versatility and prowess, an emerging subset of nonheme diiron enzymes has inherent cofactor instability making them resistant to structural characterization. This feature is widespread among members of the heme-oxygenase-like diiron oxidase/oxygenase (HDO) superfamily. HDOs have a flexible core structure that remodels upon metal binding. Although ~9600 HDOs have been unearthed, few have undergone functional characterization to date. In this chapter, we describe the methods that have been used to characterize the HDO N-oxygenase, SznF. We demonstrate the overexpression and purification of apo-SznF and methodology specifically designed to aid in obtaining an X-ray structure of holo-SznF. We also describe the characterization of the transient SznF-peroxo-Fe(III)2 complex by stopped-flow absorption and Mössbauer spectroscopies. These studies provide the framework for the characterization of new members of the HDO superfamily.


Assuntos
Oxirredutases , Oxigenases , Oxigenases/metabolismo , Heme Oxigenase (Desciclizante) , Compostos Férricos/química , Oxigênio/química , Heme
5.
ACS Bio Med Chem Au ; 2(5): 509-520, 2022 Oct 19.
Artigo em Inglês | MEDLINE | ID: mdl-36281299

RESUMO

Lipoic acid is an eight-carbon sulfur-containing biomolecule that functions primarily as a cofactor in several multienzyme complexes. It is biosynthesized as an attachment to a specific lysyl residue on one of the subunits of these multienzyme complexes. In Escherichia coli and many other organisms, this biosynthetic pathway involves two dedicated proteins: octanoyltransferase (LipB) and lipoyl synthase (LipA). LipB transfers an n-octanoyl chain from the octanoyl-acyl carrier protein to the target lysyl residue, and then, LipA attaches two sulfur atoms (one at C6 and one at C8) to give the final lipoyl cofactor. All classical lipoyl synthases (LSs) are radical S-adenosylmethionine (SAM) enzymes, which use an [Fe4S4] cluster to reductively cleave SAM to generate a 5'-deoxyadenosyl 5'-radical. Classical LSs also contain a second [Fe4S4] cluster that serves as the source of both appended sulfur atoms. Recently, a novel pathway for generating the lipoyl cofactor was reported. This pathway replaces the canonical LS with two proteins, LipS1 and LipS2, which act together to catalyze formation of the lipoyl cofactor. In this work, we further characterize LipS1 and LipS2 biochemically and spectroscopically. Although LipS1 and LipS2 were previously annotated as biotin synthases, we show that both proteins, unlike E. coli biotin synthase, contain two [Fe4S4] clusters. We identify the cluster ligands to both iron-sulfur clusters in both proteins and show that LipS2 acts only on an octanoyl-containing substrate, while LipS1 acts only on an 8-mercaptooctanoyl-containing substrate. Therefore, similarly to E. coli biotin synthase and in contrast to E. coli LipA, sulfur attachment takes place initially at the terminal carbon (C8) and then at the C6 methylene carbon.

6.
ACS Bio Med Chem Au ; 2(5): 456-468, 2022 Oct 19.
Artigo em Inglês | MEDLINE | ID: mdl-36281303

RESUMO

Lipoyl synthase (LS) catalyzes the last step in the biosynthesis of the lipoyl cofactor, which is the attachment of sulfur atoms at C6 and C8 of an n-octanoyllysyl side chain of a lipoyl carrier protein (LCP). The protein is a member of the radical S-adenosylmethionine (SAM) superfamily of enzymes, which use SAM as a precursor to a 5'-deoxyadenosyl 5'-radical (5'-dA·). The role of the 5'-dA· in the LS reaction is to abstract hydrogen atoms from C6 and C8 of the octanoyl moiety of the substrate to initiate subsequent sulfur attachment. All radical SAM enzymes have at least one [4Fe-4S] cluster that is used in the reductive cleavage of SAM to generate the 5'-dA·; however, LSs contain an additional auxiliary [4Fe-4S] cluster from which sulfur atoms are extracted during turnover, leading to degradation of the cluster. Therefore, these enzymes catalyze only 1 turnover in the absence of a system that restores the auxiliary cluster. In Escherichia coli, the auxiliary cluster of LS can be regenerated by the iron-sulfur (Fe-S) cluster carrier protein NfuA as fast as catalysis takes place, and less efficiently by IscU. NFU1 is the human ortholog of E. coli NfuA and has been shown to interact directly with human LS (i.e., LIAS) in yeast two-hybrid analyses. Herein, we show that NFU1 and LIAS form a tight complex in vitro and that NFU1 can efficiently restore the auxiliary cluster of LIAS during turnover. We also show that BOLA3, previously identified as being critical in the biosynthesis of the lipoyl cofactor in humans and Saccharomyces cerevisiae, has no direct effect on Fe-S cluster transfer from NFU1 or GLRX5 to LIAS. Further, we show that ISCA1 and ISCA2 can enhance LIAS turnover, but only slightly.

7.
J Am Chem Soc ; 144(36): 16395-16409, 2022 09 14.
Artigo em Inglês | MEDLINE | ID: mdl-36040133

RESUMO

Flavodiiron nitric oxide reductases (FNORs), found in pathogenic bacteria, are capable of reducing nitric oxide (NO) to nitrous oxide (N2O) to detoxify NO released by the human immune system. Previously, we reported the first FNOR model system that mediates direct NO reduction (Dong, H. T.; J. Am. Chem. Soc. 2018, 140, 13429-13440), but no intermediate of the reaction could be characterized. Here, we present a new set of model complexes that, depending on the ligand substitution, can either mediate direct NO reduction or stabilize a highly activated high-spin (hs) {FeNO}7 complex, the first intermediate of the reaction. The precursors, [{FeII(MPA-(RPhO)2)}2] (1, R = H and 2, R = tBu, Me), were prepared first and fully characterized. Complex 1 (without steric protection) directly reduces NO to N2O almost quantitatively, which constitutes only the second example of this reaction in model systems. Contrarily, the reaction of sterically protected 2 with NO forms the stable mononitrosyl complex 3, which shows one of the lowest N-O stretching frequencies (1689 cm-1) observed so far for a mononuclear hs-{FeNO}7 complex. This study confirms that an N-O stretch ≤1700 cm-1 represents the appropriate level of activation of the FeNO unit to enable direct NO reduction. The higher activation level of these hs-{FeNO}7 complexes required for NO reduction compared to those formed in FNORs emphasizes the importance of hydrogen bonding residues in the active sites of FNORs to activate the bound NO ligands for direct N-N coupling and N2O formation. The implications of these results for FNORs are further discussed.


Assuntos
Óxido Nítrico , Óxido Nitroso , Domínio Catalítico , Humanos , Ligantes , Óxido Nítrico/química
8.
Biochemistry ; 61(8): 689-702, 2022 04 19.
Artigo em Inglês | MEDLINE | ID: mdl-35380785

RESUMO

The enzyme BesC from the ß-ethynyl-l-serine biosynthetic pathway in Streptomyces cattleya fragments 4-chloro-l-lysine (produced from l-Lysine by BesD) to ammonia, formaldehyde, and 4-chloro-l-allylglycine and can analogously fragment l-Lys itself. BesC belongs to the emerging family of O2-activating non-heme-diiron enzymes with the "heme-oxygenase-like" protein fold (HDOs). Here, we show that the binding of l-Lys or an analogue triggers capture of O2 by the protein's diiron(II) cofactor to form a blue µ-peroxodiiron(III) intermediate analogous to those previously characterized in two other HDOs, the olefin-installing fatty acid decarboxylase, UndA, and the guanidino-N-oxygenase domain of SznF. The ∼5- and ∼30-fold faster decay of the intermediate in reactions with 4-thia-l-Lys and (4RS)-chloro-dl-lysine than in the reaction with l-Lys itself and the primary deuterium kinetic isotope effects (D-KIEs) on decay of the intermediate and production of l-allylglycine in the reaction with 4,4,5,5-[2H4]-l-Lys suggest that the peroxide intermediate or a reversibly connected successor complex abstracts a hydrogen atom from C4 to enable olefin formation. Surprisingly, the sluggish substrate l-Lys can dissociate after triggering intermediate formation, thereby allowing one of the better substrates to bind and react. The structure of apo BesC and the demonstrated linkage between Fe(II) and substrate binding suggest that the triggering event involves an induced ordering of ligand-providing helix 3 (α3) of the conditionally stable HDO core. As previously suggested for SznF, the dynamic α3 also likely initiates the spontaneous degradation of the diiron(III) product cluster after decay of the peroxide intermediate, a trait emerging as characteristic of the nascent HDO family.


Assuntos
Heme Oxigenase (Desciclizante) , Oxirredutases , Alilglicina , Heme , Lisina , Oxirredutases/metabolismo , Oxigênio/metabolismo , Oxigenases/química , Peróxidos
9.
J Inorg Biochem ; 229: 111723, 2022 04.
Artigo em Inglês | MEDLINE | ID: mdl-35074551

RESUMO

Flavodiiron NO reductases (FNORs) are important enzymes in microbial pathogenesis, as they equip microbes with resistance to the human immune defense agent nitric oxide (NO). DFT calculations predict that a network of second coordination sphere (SCS) hydrogen bonds is critical for the key NN coupling step in the NO reduction reaction catalyzed by FNORs. In this study, we report the synthesis of a model complex of FNORs with pendant hydrogen bond donors. For this purpose, the ligand H[BPMP] (= 2,6-bis[[bis(2-pyridylmethyl)amino]methyl]-4-methylphenol) was modified with two amide groups in the SCS. Reaction of the precursor complex [Fe2(BPMP(NHCOtBu)2)(OAc)](OTf)2 (1) (OTf- = triflate anion) with NO in the presence of base led to the surprising isolation of a diiron mononitrosyl complex, [Fe2(BPMP(NHCOtBu)(NCOtBu))(OAc)(NO)](OTf) (2) and a triiron decomposition product, [Fe3(BPMP(NHCOtBu)2)(OAc)2(µ-O)2(ONO)](OTf) (3), which were both structurally characterized. Complex 2 models the corresponding mononitrosyl adduct in FNORs. This result points towards a strategy that can be used to stabilize mononitrosyl diiron complexes, using the SCS.


Assuntos
Complexos de Coordenação/química , Ferro/química , Óxido Nítrico/química , Oxirredutases/química , Catálise , Humanos , Ligação de Hidrogênio , Ligantes , Modelos Químicos , Estrutura Molecular
10.
Science ; 373(6551): 236-241, 2021 07 09.
Artigo em Inglês | MEDLINE | ID: mdl-34083449

RESUMO

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causal agent of COVID-19, uses an RNA-dependent RNA polymerase (RdRp) for the replication of its genome and the transcription of its genes. We found that the catalytic subunit of the RdRp, nsp12, ligates two iron-sulfur metal cofactors in sites that were modeled as zinc centers in the available cryo-electron microscopy structures of the RdRp complex. These metal binding sites are essential for replication and for interaction with the viral helicase. Oxidation of the clusters by the stable nitroxide TEMPOL caused their disassembly, potently inhibited the RdRp, and blocked SARS-CoV-2 replication in cell culture. These iron-sulfur clusters thus serve as cofactors for the SARS-CoV-2 RdRp and are targets for therapy of COVID-19.


Assuntos
Coenzimas/metabolismo , RNA-Polimerase RNA-Dependente de Coronavírus/antagonistas & inibidores , RNA-Polimerase RNA-Dependente de Coronavírus/química , Óxidos N-Cíclicos/farmacologia , Ferro/metabolismo , SARS-CoV-2/efeitos dos fármacos , Enxofre/metabolismo , Motivos de Aminoácidos , Animais , Antivirais/farmacologia , Sítios de Ligação , Domínio Catalítico , Chlorocebus aethiops , Coenzimas/química , RNA-Polimerase RNA-Dependente de Coronavírus/metabolismo , Inibidores Enzimáticos/farmacologia , Ferro/química , Domínios Proteicos , RNA Helicases/metabolismo , SARS-CoV-2/enzimologia , SARS-CoV-2/fisiologia , Marcadores de Spin , Enxofre/química , Células Vero , Proteínas não Estruturais Virais/metabolismo , Replicação Viral/efeitos dos fármacos , Zinco/metabolismo
11.
Nat Commun ; 11(1): 6310, 2020 12 09.
Artigo em Inglês | MEDLINE | ID: mdl-33298951

RESUMO

Heme biosynthesis and iron-sulfur cluster (ISC) biogenesis are two major mammalian metabolic pathways that require iron. It has long been known that these two pathways interconnect, but the previously described interactions do not fully explain why heme biosynthesis depends on intact ISC biogenesis. Herein we identify a previously unrecognized connection between these two pathways through our discovery that human aminolevulinic acid dehydratase (ALAD), which catalyzes the second step of heme biosynthesis, is an Fe-S protein. We find that several highly conserved cysteines and an Ala306-Phe307-Arg308 motif of human ALAD are important for [Fe4S4] cluster acquisition and coordination. The enzymatic activity of human ALAD is greatly reduced upon loss of its Fe-S cluster, which results in reduced heme biosynthesis in human cells. As ALAD provides an early Fe-S-dependent checkpoint in the heme biosynthetic pathway, our findings help explain why heme biosynthesis depends on intact ISC biogenesis.


Assuntos
Heme/biossíntese , Proteínas Ferro-Enxofre/metabolismo , Ferro/metabolismo , Sintase do Porfobilinogênio/metabolismo , Enxofre/metabolismo , Motivos de Aminoácidos , Vias Biossintéticas , Linhagem Celular , Coenzimas/metabolismo , Cisteína/metabolismo , Humanos , Proteínas Ferro-Enxofre/genética , Sintase do Porfobilinogênio/genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo
12.
J Am Chem Soc ; 142(27): 11818-11828, 2020 07 08.
Artigo em Inglês | MEDLINE | ID: mdl-32511919

RESUMO

The alkylating warhead of the pancreatic cancer drug streptozotocin (SZN) contains an N-nitrosourea moiety constructed from Nω-methyl-l-arginine (l-NMA) by the multi-domain metalloenzyme SznF. The enzyme's central heme-oxygenase-like (HO-like) domain sequentially hydroxylates Nδ and Nω' of l-NMA. Its C-terminal cupin domain then rearranges the triply modified arginine to Nδ-hydroxy-Nω-methyl-Nω-nitroso-l-citrulline, the proposed donor of the functional pharmacophore. Here we show that the HO-like domain of SznF can bind Fe(II) and use it to capture O2, forming a peroxo-Fe2(III/III) intermediate. This intermediate has absorption- and Mössbauer-spectroscopic features similar to those of complexes previously trapped in ferritin-like diiron oxidases and oxygenases (FDOs) and, more recently, the HO-like fatty acid oxidase UndA. The SznF peroxo-Fe2(III/III) complex is an intermediate in both hydroxylation steps, as shown by the concentration-dependent acceleration of its decay upon exposure to either l-NMA or Nδ-hydroxy-Nω-methyl-l-Arg (l-HMA). The Fe2(III/III) cluster produced upon decay of the intermediate has a small Mössbauer quadrupole splitting parameter, implying that, unlike the corresponding product states of many FDOs, it lacks an oxo-bridge. The subsequent decomposition of the product cluster to one or more paramagnetic Fe(III) species over several hours explains why SznF was previously purified and crystallographically characterized without its cofactor. Programmed instability of the oxidized form of the cofactor appears to be a unifying characteristic of the emerging superfamily of HO-like diiron oxidases and oxygenases (HDOs).


Assuntos
Proteínas de Bactérias/metabolismo , Compostos Férricos/metabolismo , Metaloproteínas/metabolismo , Compostos de Nitrosoureia/metabolismo , Estreptozocina/biossíntese , Proteínas de Bactérias/química , Proteínas de Bactérias/isolamento & purificação , Compostos Férricos/química , Hidroxilação , Metaloproteínas/química , Metaloproteínas/isolamento & purificação , Modelos Moleculares , Estrutura Molecular , Compostos de Nitrosoureia/química , Streptomyces/enzimologia , Estreptozocina/química
13.
Angew Chem Int Ed Engl ; 58(49): 17695-17699, 2019 12 02.
Artigo em Inglês | MEDLINE | ID: mdl-31550416

RESUMO

Non-heme high-spin (hs) {FeNO}8 complexes have been proposed as important intermediates towards N2 O formation in flavodiiron NO reductases (FNORs). Many hs-{FeNO}8 complexes disproportionate by forming dinitrosyl iron complexes (DNICs), but the mechanism of this reaction is not understood. While investigating this process, we isolated a new type of non-heme iron nitrosyl complex that is stabilized by an unexpected spin-state change. Upon reduction of the hs-{FeNO}7 complex, [Fe(TPA)(NO)(OTf)](OTf) (1), the N-O stretching band vanishes, but no sign of DNIC or N2 O formation is observed. Instead, the dimer, [Fe2 (TPA)2 (NO)2 ](OTf)2 (2) could be isolated and structurally characterized. We propose that 2 is formed from dimerization of the hs-{FeNO}8 intermediate, followed by a spin state change of the iron centers to low-spin (ls), and speculate that 2 models intermediates in hs-{FeNO}8 complexes that precede the disproportionation reaction.


Assuntos
Ferro/química , Óxido Nítrico/química , Óxidos de Nitrogênio/química , Dimerização , Ligantes , Conformação Molecular , Oxirredutases/metabolismo , Relação Estrutura-Atividade , Termodinâmica
14.
Chem Commun (Camb) ; 55(11): 1588-1591, 2019 Jan 31.
Artigo em Inglês | MEDLINE | ID: mdl-30656298

RESUMO

We investigate here the effect of electronic communication between two Mn(iii) porphyrin π-cation radicals, connected covalently through an ethylene bridge, which exhibit significant electronic communication resulting in strong antiferromagnetic coupling predominantly between two porphyrin radical spins. This, however, is in sharp contrast to its diiron(iii) analog where the porphyrin π-cation radical undergoes stronger antiferromagnetic coupling predominantly with the corresponding Fe(iii) unpaired spin. Such a difference in the spin coupling model has also influenced their reactivity. While the dimanganese(iii) dication diradical complex quickly transforms into a µ-hydroxo dimanganese(iii) porphyrin-oxophlorin heterodimer upon addition of a base, its diiron(iii) analog remains very stable.

15.
J Am Chem Soc ; 140(31): 9904-9911, 2018 08 08.
Artigo em Inglês | MEDLINE | ID: mdl-30001628

RESUMO

Linkage isomerization of the cyanide on the [2Fe] subsite of the [FeFe]-H2ase active site was reported to occur during the docking of various synthetic diiron complexes onto a carrier protein, apo-HydF, as the initial step for the artificial maturation of the [FeFe]-H2ase enzyme (Berggren et al., Nature, 2013, 499, 66-70). An investigation of our triiron organometallic models (FeFe-CN/NC-Fe') revealed that, once a Fe-CN-Fe connection is formed, high barriers prevent such cyanide linkage isomerization ( Chem. Sci., 2016, 7, 3710-3719). To explore effects of variable oxidation states of the receiver unit, we introduce copper(I/II) fragments, precedented in Holm's models of cytochrome c oxidase to induce cyanide isomerization (Cu-CN/NC-Fe), to the diiron synthetic analogues of [FeFe]-H2ase. For comparison, a zinc variant of the cytochrome c oxidase model is also examined. According to the oxidation state of copper, a cyanide flip was induced during the formation of both Zn-NC-Cu and FeFe-CN-Cu complexes. Density functional theory calculations are used to predict the mechanisms for such linkage isomerization and account for optimal conditions including oxidation states of metals, spin states, and solvation. These results on synthetic paradigms imply a role for oxidation state control of cyanide isomerization during hydrogenase active site assembly.

16.
Chemistry ; 22(41): 14585-97, 2016 Oct 04.
Artigo em Inglês | MEDLINE | ID: mdl-27555240

RESUMO

The synthesis, structure, and properties of bischloro, µ-oxo, and a family of µ-hydroxo complexes (with BF4 (-) , SbF6 (-) , and PF6 (-) counteranions) of diethylpyrrole-bridged diiron(III) bisporphyrins are reported. Spectroscopic characterization has revealed that the iron centers of the bischloro and µ-oxo complexes are in the high-spin state (S=(5) /2 ). However, the two iron centers in the diiron(III) µ-hydroxo complexes are equivalent with high spin (S=(5) /2 ) in the solid state and an intermediate-spin state (S=(3) /2 ) in solution. The molecules have been compared with previously known diiron(III) µ-hydroxo complexes of ethane-bridged bisporphyrin, in which two different spin states of iron were stabilized under the influence of counteranions. The dimanganese(III) analogues were also synthesized and spectroscopically characterized. A comparison of the X-ray structural parameters between diethylpyrrole and ethane-bridged µ-hydroxo bisporphyrins suggest an increased separation, and hence, less interactions between the two heme units of the former. As a result, unlike the ethane-bridged µ-hydroxo complex, both iron centers become equivalent in the diethylpyrrole-bridged complex and their spin state remains unresponsive to the change in counteranion. The iron(III) centers of the diethylpyrrole-bridged diiron(III) µ-oxo bisporphyrin undergo very strong antiferromagnetic interactions (J=-137.7 cm(-1) ), although the coupling constant is reduced to only a weak value in the µ-hydroxo complexes (J=-42.2, -44.1, and -42.4 cm(-1) for the BF4 , SbF6 , and PF6 complexes, respectively).

17.
Chemistry ; 22(32): 11214-23, 2016 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-27304611

RESUMO

A hitherto unknown family of diiron(III)-µ-fluoro bisporphyrins has been synthesized and structurally characterized. Fluoride abstraction from SbF6 (-) and BF4 (-) resulted in the synthesis of the µ-fluoro complexes of ethane- and ethene-bridged diiron(III) bisporphyrins. Two such complexes were structurally characterized, which revealed a single fluoro bridge between two iron centers with a remarkably bent Fe-F-Fe unit. Although isoelectronic with the µ-hydroxo complexes, the µ-fluoro species are quite divergent in terms of the electronic structure and properties. UV/Vis spectroscopy of the µ-fluoro complex exhibits a large redshift (ca. 18 nm) of the Soret band in comparison to their µ-hydroxo analog. Combined analysis by single crystal X-ray structure determination and Mössbauer and (1) H NMR spectroscopy revealed the presence of two equivalent iron(III) centers in the µ-fluoro complexes in both solid and solution phases. In contrast, the iron(III) centers of the µ-hydroxo complexes are known to be inequivalent. Variable-temperature magnetic studies show a weak antiferromagnetic interaction between the iron(III) centers of the µ-fluoro complexes with coupling constants (J) ranging from -33 to -40 cm(-1) . The experimental results were further supported by DFT calculations.

18.
Inorg Chem ; 55(7): 3239-51, 2016 Apr 04.
Artigo em Inglês | MEDLINE | ID: mdl-27002790

RESUMO

The synthesis, structure, and properties of a new family of five ethane-bridged dimanganese(III) µ-hydroxo bisporphyrins with the same core structure but different counteranions are reported here. Additions of 10% Brønsted acids such as HI, HBF4, HSbF6, HPF6, and HClO4 to a dichloromethane solution of the dichloro dimanganese(III) bisporphyrin produces complexes having a remarkably bent µ-hydroxo group with I3(-), BF4(-), SbF6(-), PF6(-), and ClO4(-) as counteranions, respectively. The X-ray structures of all complexes have been determined, which have revealed the presence of two equivalent high-spin manganese(III) centers with equally distorted porphyrin rings in the complexes, in sharp contrast with the case for the diiron(III) µ-hydroxo bisporphyrin analogues. (1)H NMR spectra have shown highly deshielded meso resonances, unlike the case for the diiron(III) analogues, where the meso resonances are highly shielded. The variable-temperature magnetic data have been subjected to a least-squares fit which provides a moderate antiferromagnetic coupling through the hydroxo bridge between two zero-field split Mn(III) centers with coupling constant (J) values ranging from -29.5 to -38.6 cm(-1). Fairly good correlations are observed for J with Mn-O(H) distances and Mn-O(H)-Mn angles for all the complexes except for that having an I3(-) counteranion. DFT calculations support the stabilization of two equivalent high-spin Mn(III) porphyrin cores in the complexes and have also explored the role of metal spin in controlling porphyrin ring deformation. Unlike diiron(III) µ-hydroxo bisporphyrin complexes, the dimanganese(III) analogues do not have easily accessible spin states of the metal attainable by subtle environmental perturbations and, therefore, can only stabilize the high-spin state with a variety of counteranions.

19.
Inorg Chem ; 55(7): 3229-38, 2016 Apr 04.
Artigo em Inglês | MEDLINE | ID: mdl-26987053

RESUMO

The interaction between two porphyrin macrocycles, connected covalently through either a rigid ethylene or a flexible ethane bridge, in the metalloporphyrin dimers (M: 2H, Zn(2+)) have been investigated upon stepwise oxidations. Upon 1e-oxidation, two porphyrin macrocycles come closer and cofacial to each other while 2e-oxidation forces them to be separated as far as possible. This has resulted in the conversion of the cis isomer to trans for the ethylene bridged porphyrin dimer with the stabilization of an unusual "U" form, which has unique spectral and geometrical features. Detailed ultraviolet-visible-near-infrared (UV-vis-NIR), infrared (IR), electron paramagnetic resonance (EPR), and nuclear magnetic resonance (NMR) spectroscopic investigations, along with X-ray structure determination of the 2e-oxidized complexes, have demonstrated strong electronic communications between two porphyrin π-cation radicals through the bridging ethylene group. Such extensive π-conjugation also results in strong antiferromagnetic coupling between the radical spins of both of the macrocycles, which generates a diamagnetic compound. The experimental observations are also strongly supported by density functional theory (DFT) calculations.

20.
Angew Chem Int Ed Engl ; 55(3): 996-1000, 2016 Jan 18.
Artigo em Inglês | MEDLINE | ID: mdl-26630503

RESUMO

A highly oxidized cobalt porphyrin dimer is reported. Each cobalt(II) ion and porphyrin ring underwent 1e oxidation with iodine as the oxidant to give a 4e-oxidized cobalt(III) porphyrin π-cation radical dimer. The bridging ethylene group allows for substantial conjugation of the porphyrin macrocycles, thus leading to a strong antiferromagnetic coupling between the π-cation radicals and to stabilization of the singlet state. X-ray crystallography clearly showed that the complex may be considered as a real supramolecule rather than two cobalt(III) porphyrin π-cation radicals that interact through space.

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