Technologies monitoring and improving biosecurity compliance in barn anterooms.

People can act as mechanical vectors, and introduce and spread infectious diseases on farms. Preventive measures, such as changing boots and washing hands, need systematic implementation to manage this risk. Unfortunately, biosecurity compliance regarding biosecurity measures in barn anterooms has been shown to be generally low in all animal production systems. Indeed, the main challenge with biosecurity is maintaining compliance. The development of an effective on-farm biosecurity program requires several elements. These include farm and barn designs facilitating implementation of biosecurity measures; consistently communicating with all personnel and visitors informing them about threats and biosecurity; training programs for all farm personnel, explaining why biosecurity is effective in preventing infectious disease transmission, which measures are needed, and how to best implement them. All these components would be further optimized if automated monitoring systems were implemented with feedback mechanisms. Technologies are now available and are being adapted to the farm context to monitor biosecurity compliance. Two pilot projects using radio-frequency-identification-based (RFID) real-time continuous automated monitoring system quantifying hand sanitizing and boot compliance were conducted. The first one (MediHand Trace system) was a system designed to monitor and provide real-time feedback for handwashing in a hospital environment. It was functional for this task, although not sturdy enough for long-term use in a farm environment. The second system was a prototype designed for barns and with foot mats allowing the monitoring of footwear management as well as handwashing. These pilot studies have shown that real-time feedback helps improve compliance. However, the efficacy of the systems was very dependent on the physical set-up of the anteroom.

Clostridium botulinum type C, D, C/D, and D/C: An update.

Clostridium botulinum is the main causative agent of botulism, a neurological disease encountered in humans as well as animals. Nine types of botulinum neurotoxins (BoNTs) have been described so far. Amongst these "toxinotypes," the A, the B and E are the most frequently encountered in humans while the C, D, C/D and D/C are mostly affecting domestic and wild birds as well as cattle. In France for instance, many cases and outbreaks are reported in these animal species every year. However, underestimation is very likely at least for avifauna species where the detection of dead animals can be challenging. Knowledge about BoNTs C, D, C/D, and D/C and the diseases they cause in animals and humans is still scarce and unclear. Specifically, the potential role of animal botulism outbreaks in cattle and poultry as a source of human illness needs to be further assessed. In this narrative review, we present the current knowledge about toxinotypes C, D, C/D, and D/C in cattle and poultry with, amongst various other aspects, their epidemiological cycles. We also discuss the zoonotic potential of these toxinotypes and some possible ways of risk mitigation. An adapted and effective management of botulism outbreaks in livestock also requires a better understanding of these less common and known toxinotypes.

Biosecurity measures in French poultry farms are associated with farm type and location.

The severe impact of recently reported Highly Pathogenic Avian Influenza (HPAI) outbreaks have emphasized the need to better monitor biosecurity practices among the different French poultry production systems. Between October 2016 and September 2018, a large national cross-sectional study was carried out in France to assess biosecurity levels in high-risk poultry farms and identify farm biosecurity profiles, using Multiple Correspondence and Hierarchical Cluster Analyses. Results indicate that there is substantial room for improvement in cleaning and disinfection, anteroom management and delimitation of farm and production units for more than 50 % of the 1,004 analyzed farms. The farm biosecurity profile showing the highest level of biosecurity included commercial intensive poultry farms (gallinaceous poultry farms, in North-Western France), and those with a recent history of HPAI outbreak (duck farms, in South-Western France). The farms biosecurity profiles showing the lowest level of biosecurity included farms with multiple species (duck and gallinaceous poultry) or multiple production types (broilers and egg-layers), located in regions with a lower poultry density and without a recent history of HPAI outbreak. Outcomes provide support to adapt biosecurity improvement and inspection plans.

Factors associated with Salmonella enterica and Escherichia coli during downtime in commercial broiler chicken barns in Ontario.

Salmonella enterica and Escherichia coli are bacteria of concern to veterinary public health and poultry health. Our research aimed to determine the factors associated with S. enterica and E. coli in commercial broiler chicken barns during the rest period between flocks to identify the best methods of sanitation for bacterial load reduction. This involved collecting samples from September 2015 to July 2016 from the floors of 36 barns before sanitation (baseline) and at 2 time intervals after sanitation, followed by microbiological and molecular analysis. A priori variables of interest included sanitation procedure (dry cleaning, wet cleaning, disinfection), sampling point (baseline, 2 d after sanitation, 6 d after sanitation), and flooring type (concrete, wood). The odds of detecting S. enterica were higher on wooden floors that were wet-cleaned than on concrete floors that were dry-cleaned, lower in the winter and spring than in the fall, and lower when samples were collected 2 d and 6 d after sanitation than at baseline. For E. coli, the concentration was higher on wooden floors than on concrete floors and in the summer than in the fall, and it was lower in postsanitation samples from disinfected barns than in presanitation samples from dry-cleaned barns and in the winter than in the fall. Among E. coli isolates, factors associated with the presence of qacEΔ1, a gene associated with resistance to quaternary ammonium compounds, included sanitation procedure, flooring type, cycle length, and the number of times per yr the barn is disinfected. Our findings highlight the importance of cleaning after litter removal, although the sanitation procedure chosen might differ depending on which pathogen is present and causing disease issues; dry cleaning appears to be preferable for S. enterica control, especially in barns with wooden floors, whereas disinfection appears to be preferable for E. coli reduction.

Determinants of biosecurity practices in French duck farms after a H5N8 Highly Pathogenic Avian Influenza epidemic: The effect of farmer knowledge, attitudes and personality traits.

Biosecurity is crucial for infectious disease prevention, more importantly in the absence of vaccination. The need for improving the implementation of biosecurity practices was highlighted in French duck farms following the 2016-2017 H5N8 Highly Pathogenic Avian Influenza (HPAI) epidemic. Farmers have multiple reasons for not implementing biosecurity practices: external (time, money) and internal (socio-psychological). The purpose of this study was to determine how sets of socio-psychological factors (i.e. knowledge on biosecurity and avian influenza transmission, attitudes, personality traits, social background) affect the adoption of on-farm biosecurity practices. Biosecurity practices and socio-psychological determinants were assessed during 127 duck farm visits, in South West France, using both questionnaires and on-farm observations. Factorial analysis of mixed data (FAMD) and hierarchical clustering analysis (HCA) identified three groups of farmers with different socio-psychological profiles: the first group was characterized by minimal knowledge, negative attitudes towards biosecurity, little social pressure and a low level of conscientiousness. The second group was characterized by more extensive experience in poultry production, higher stress and social pressure. The third group was characterized by less experience in poultry production, better knowledge and positive attitudes towards biosecurity, increased self-confidence and orientation towards action. The first group had a significantly lower adoption of biosecurity measures than the two other groups. A better understanding of the factors involved in farmers' decision-making could improve the efficiency of interventions aiming at improving and maintaining the level of on-farm biosecurity in the duck industry.

Prevalence of Mycoplasma synoviae and Its Impact on Productivity in Commercial Poultry Farms in Quebec, Canada.

Mycoplasma synoviae (MS) is associated with upper respiratory disease, joint, and reproductive system disease in poultry. Economic losses are due to stunting, increased mortality, lower egg production, and higher slaughterhouse condemnations. The seroprevalence of MS is increasing worldwide, and more pathogenic strains have emerged over the past few years. Where this increase is noted, the economic consequences are considerable, even when there are no obvious clinical signs. The best control strategy is to maintain mycoplasma-free flocks. Since 2014 in Quebec, Canada, MS has been isolated with greater frequency in poultry farms and at times, as a primary pathogenic agent. The aim of this study was to evaluate the prevalence and impact of MS in commercial poultry farms in Quebec because the poultry industry was considering an insurance program that would cover losses in case of an outbreak. MS was shown to be present in all types of commercial production, although egg layers were principally affected with over 50% of flocks sampled being MS-positive in all producing regions of the province. On the basis of vlhA gene sequencing, several strains were identified with the most prevalent ones being type E, followed by Qc-1, a strain specific to Quebec. On average, the impact of MS on production parameters were not significant for any of the different types of commercial poultry production.

Prevalencia de Mycoplasma synoviae y su impacto en la productividad en granjas avícolas comerciales en Quebec, Canadá. Mycoplasma synoviae (MS) se asocia con enfermedades de las vías respiratorias superiores, problemas articulares y del sistema reproductivo en la avicultura comercial. Las pérdidas económicas se deben al retraso en el crecimiento, aumento de la mortalidad, menor producción de huevo y mayores decomisos en plantas de procesamiento. La seroprevalencia de M. synoviae está aumentando en todo el mundo y en los últimos años han surgido cepas más patógenas. En los lugares donde se ha observado este aumento, las consecuencias económicas han sido considerables, incluso cuando no se presentan signos clínicos evidentes. La mejor estrategia de control es mantener las parvadas libres de micoplasmas. Desde 2014 en Quebec, Canadá, M. synoviae se ha aislado con mayor frecuencia en granjas avícolas y en ocasiones como agente patógeno primario. El objetivo de este estudio fue evaluar la prevalencia y el impacto de M. synoviae en granjas avícolas comerciales en Quebec porque la industria avícola estaba considerando un programa de seguros que cubriría las pérdidas en caso de un brote. Se demostró que M. synoviae estaba presente en todos los tipos de producción comercial, aunque las aves de postura de huevo se vieron afectadas principalmente, con más del 50% de las parvadas muestreadas positivas a M. synoviae en todas las regiones productoras de la provincia. Con base en la secuenciación del gene vlhA, se identificaron varias cepas, siendo las más prevalentes el tipo E, seguidas de la cepa QC-1, que es específica de Quebec. En promedio, el impacto de M. synoviae en los parámetros de producción no fue significativo para ninguno de los diferentes tipos de producción avícola comerciales.

Expert Elicitation to Estimate the Relative Risk of Food Safety Criteria Included in the Establishment-Based Risk Assessment Model for Canadian Hatcheries.

The Canadian Food Inspection Agency is developing an Establishment-based Risk Assessment model for Hatcheries to allocate inspection resources according to the food safety risk associated with each hatchery falling under its jurisdiction. In a previous study, 29 factors contributing to the food safety risk of hatcheries were identified and grouped into three clusters (inherent risk, risk mitigation, and compliance) and assessment criteria were defined. The objective of the current study was to estimate the relative risk (RR) of these criteria. Two rounds of expert elicitations were conducted to allow 13 Canadian experts to estimate the RR of each criterion (n = 96) based on its potential impact on human health, with a specific focus on Salmonella spp. This process also aimed to estimate the maximum increase or decrease in the overall food safety risk of a hatchery when considering multiple criteria belonging to a specific cluster and to assess the risk attribution of Salmonella spp. at the hatchery and bird-type levels. Results showed that the respondent profile had no influence on the importance given to a majority of criteria. Uniformity of answers among experts improved from the first to the second round. Overall, 62.5%, 32.3%, and 5.2% of the criteria were attributed to an RR that was less than 2, between 2 and 3, and greater than 3, respectively. Mixing eggs from different supply flocks when placed into the same hatching unit, hatching multiple species, and importing eggs with unknown quality status were identified as having the highest contribution to a hatchery's inherent risk. Requiring information on the foodborne pathogen status of supplying flocks and the occurrence of regulatory enforcement actions were the most impactful risk mitigation and compliance factors, respectively. The median RR value assigned to each criterion and cluster will be used to build this new model.

Identification and selection of food safety-related risk factors to be included in the Canadian Food Inspection Agency's Establishment-based Risk Assessment model for Hatcheries.

Towards the continuous improvement of its inspection system, the Canadian Food Inspection Agency (CFIA) is developing an Establishment-based Risk Assessment model for Hatcheries to allocate inspection resources based on the food safety risk associated with the Canadian hatcheries falling under its jurisdiction. The objectives of the current study were to identify and select critical food safety-related risk factors that would be included in this model, with a main focus on Salmonella. A literature review was used to develop a comprehensive list of risk factors that could potentially contribute to the food safety risk attributed to Canadian hatcheries operating in all production streams (breeders, layers, broilers, turkeys, waterfowl and game birds). The development of this list used a selection process that was conducted according to the availability of data sources, the clarity of definition and the measurability of the selected risk factors. A panel of experts reviewed and adjusted the identified risk factors. A final list of 29 risk factors was generated; 20 originated from the scientific literature and nine from the expert panel. Risk factors were grouped in three clusters according to whether they pertained to the inherent risk (nine factors identified), risk mitigation (nine factors identified) or compliance of a hatchery with its preventive control plan and regulatory requirements (11 factors identified). Criteria for assessing each risk factor were defined based on common practices used in the Canadian hatchery industry. This comprehensive list of risk factors and criteria represents useful information to support the design and implementation of a Canadian risk assessment model for hatcheries, but could also be used by like-minded food safety authorities.

Assessment of the impact of forestry and leisure activities on wild boar spatial disturbance with a potential application to ASF risk of spread.

In Europe, African swine fever virus (ASFV) is one of the most threatening infectious transboundary diseases of domestic pigs and wild boar. In September 2018, ASF was detected in wild boar in the South of Belgium. France, as a bordering country, is extremely concerned about the ASF situation in Belgium, and an active preparedness is ongoing in the country. One of the questions raised by this situation relates to disturbing activities that may affect wild boar movements and their possible impact on the spread of ASFV. Despite evidence of disturbance related to hunting practices, there is a paucity of information on the impact of forestry and human leisure activities. To assess this impact on wild boar movements, a systematic review was first conducted but very few useful data were obtained. For this reason, an expert elicitation was carried out by the French Agency for Food, Environmental and Occupational Health & Safety in order to deal with this knowledge gap. A total of 30 experts originating from France and adjacent neighbouring countries (Spain, Belgium and Switzerland) were elicited about the relative importance of six factors of spatial disturbance of wild boar (noise, smell, invasion of space, modification of the environment, duration and frequency of the activity). Then, for each factor of disturbance, they were asked about the impact of 16 different commercial forestry and human leisure activities. A global weighted score was estimated in order to capture the variability of a wide range of territorial conditions and the uncertainty of expert elicitation. This estimate permitted ranking all 16 activities and aggregating them in three groups according to their potential for disturbance of wild boar, using a regression tree analysis. The results of this expert elicitation provide a methodological approach that may be useful for French and other European decision makers and stakeholders involved in the crisis management of ASF.

Biosecurity practices on foie gras duck farms, Southwest France.

On-farm biosecurity can be assessed by analyzing patterns of practices to better tailor technical advice to producers. Given their close contact with environmental and wildlife disease reservoirs, free-range duck farms are exposed to multiple risk factors of pathogen exposure that are rare or absent in indoor production. The recurrent emergence of Highly Pathogenic Avian Influenza (HPAI) viruses in Southeast Asia and Europe has emphasized the importance of farm-level biosecurity on free-range duck farms. This study was conducted on 46 French duck farms. The farms were visited and an 80-question survey was administered to assess biosecurity practices. Patterns of practices were explored with multiple correspondence analysis and hierarchical cluster analysis. Farms were assigned to one of three clusters in which specific farm types were overrepresented: farms specialized in rearing to grow-out phases and open-circuit full cycle (i.e., all production phases on the farm) farms in cluster 1, closed-circuit full cycle farms in cluster 2, and farms specialized in gavage in cluster 3. Differences in practices might be linked with differences in production constraints. This study provides a baseline assessment of biosecurity practices on foie gras duck farms in Southwest France and will help efforts to adapt biosecurity programs to farm types.

Evaluation of the relationship between personality traits, experience, education and biosecurity compliance on poultry farms in Québec, Canada.

Biosecurity compliance is an issue in all types of animal production. Poor compliance is frequently related to lack of knowledge or comprehension. Human dimensions, such as personality and attitudes were also suggested as being related to compliance. As part of a larger study, personality traits, experience, education and training of employees, visitors and growers were evaluated to assess their relationship with their compliance with biosecurity measures when entering and exiting poultry barns. Biosecurity compliance was evaluated using hidden cameras. One hundred fourteen individuals involved in a total of 2379 visits on 23 poultry farms responded to a personality test. Results demonstrated that several determinants of compliance exist, and some are related to personality, experience and education. Three personality traits were significantly associated with compliance: responsibility, complexity and action-oriented. Such information has important implications for the selection of job applicants or task attribution and to enhance effectiveness of training programs.

Risk signals of an influenza pandemic caused by highly pathogenic avian influenza subtype H5N1: spatio-temporal perspectives.

Highly pathogenic avian influenza (HPAI) subtype H5N1 is a trans-boundary animal disease that has crossed the animal-human species barrier and over the past decade has had a considerable impact on the poultry industry, wild bird populations and on human health. Understanding the spatio-temporal patterns of H5N1 outbreaks can provide visual clues to the dynamics of disease spread and of areas at risk, and thus improve the cost-effectiveness of disease control and prevention. This study describes the characteristics and investigates the temporal, spatial and space-time dynamics of H5N1 outbreaks in domestic poultry between December 2003 and December 2009 using a global database. The study found that the start date of the epidemic wave was postponed, the duration of the epidemic was prolonged and its magnitude reduced over time, but the disease transmission cycle was not efficiently interrupted. Two 'hot-spot' regions of H5N1 outbreaks were identified: well-documented locations in East and Southeast Asia, as well as a novel location at the boundaries of Europe and Africa, where enhanced surveillance should be conducted. The risk of a pandemic due to H5N1 remains high.

Evaluation of strategies to enhance biosecurity compliance on poultry farms in Québec: effect of audits and cameras.

Biosecurity compliance is generally poor in all types of animal production systems around the world. Therefore, it is essential to define strategies to improve the implementation of biosecurity measures. This study evaluated the value of audits and visible cameras on compliance with biosecurity measures required when entering and exiting poultry barns on 24 poultry farms in Québec, Canada. Short term (first two weeks) and medium term (six months later) compliance were determined. Application of biosecurity measures was evaluated using hidden cameras. Video viewing revealed a total of 2748 visits by 259 different individuals. Results showed that bimonthly audits did not have any impact on medium term compliance. Visible cameras had a significant impact on changing boots (OR=9.6; 1.9-48.4) and respecting areas (contaminated vs. clean) during the visit (OR=14.5; 1.2-175.1) for the short term period. However, six months later, compliance declined and was no longer significantly different from controls. Duration and moment of the visit, presence of the grower or an observer, barn entrance design, number of barns, number of biosecurity measures requested, type of boots worn, gender and being a member of a grower's family were significantly associated with biosecurity compliance.

Description of 44 biosecurity errors while entering and exiting poultry barns based on video surveillance in Quebec, Canada.

The effectiveness of biosecurity measures depends largely on the consistency of their applications by all those involved in poultry production. Unfortunately, poor biosecurity compliance has been reported repeatedly in poultry, as well in all other major animal productions. As part of a larger study, we conducted an investigation on eight poultry farms in Quebec, Canada, to evaluate compliance of existing biosecurity measures using hidden cameras. The objectives were to evaluate and describe the application of biosecurity measures when entering and exiting poultry barns. A total of 44 different mistakes were observed from 883 visits done by 102 different individuals. On average, four errors were recorded per visit. The maximum number of errors made by one individual during one visit was 14. People observed over several visits made on average six different errors. Twenty-seven out of the 44 errors (61.4%) were related to area delimitation (clean versus contaminated), six to boots (13.6%), five to hand washing (11.4%), three to coveralls (6.8%) and three to logbooks (6.8%). The nature and frequency of errors suggest a lack of understanding of biosecurity principles. There is thus a need to improve biosecurity training by making educational material available to all poultry personnel demonstrating why and how to apply biosecurity measures.

Genotyping of Canadian isolates of fowl adenoviruses.

Five hundred and seventy-three clinical submissions with fowl adenovirus (FAdV) involvement were examined to investigate the association of different types of FAdV with clinical problems related to FAdV infection. Samples were received from 2000 to 2006 and originated from seven Canadian provinces. Four hundred and eighty-seven submissions were inclusion body hepatitis (IBH) related, while 86 were not IBH related. Viruses isolated from 287 samples were further analysed by hexon gene loop 1 sequencing. Twenty-seven genotyped FAdVs were from Alberta, 20 from British Columbia, 16 from Manitoba, one from Nova Scotia, 82 from Ontario, 64 from Quebec and 77 from Saskatchewan. Two hundred and forty-six analysed FAdVs were from IBH cases, confirmed by liver histopathology, by FAdV isolation from the liver, or both. Based on hexon gene loop 1 sequencing analysis, FAdVs associated with IBH outbreaks were genetically related to FAdV02 (nine isolates, 99.4%), FAdV08a (100 isolates, 99.4% to 100%) and FAdV11 (98 isolates, 99.4% to 100%). Thirty-nine viruses were 93.7% to 94.3% identical to FAdV07 strain x11a, but the genetic and immunogenic properties of this strain require further investigation. In IBH cases, the co-infection rates for infectious bursal disease virus, infectious bronchitis virus, reoviruses and Newcastle disease virus were 3.47%, 1.04%, 6.25% and 0.69%, respectively. Forty-one genotyped FAdVs were from "non-IBH" cases. Viruses isolated from non-IBH cases consisted of 22 FAdV01, 15 FAdV11, two FAdV08a and one each of FAdV02 and FAdV04 viruses. Co-infection rates in non-IBH submissions were 50.00% for infectious bursal disease virus, 40.70% for infectious bronchitis virus, 27.91% for reoviruses and 1.16% for Newcastle disease virus.

T lymphocyte subpopulations diverge in commercially raised chickens.

To evaluate immunocompetence in commercially raised chickens, we immunophenotyped Dekalb Delta and H&N White Leghorn (WLH) hybrids, 20 chickens in each of 3 age groups (9 wk [juvenile], 25 wk [young adult], and 79 or 80 wk [adult]), for circulating CD3+, CD4+, CD8+, TCR1+, TCR2+, and TCR3+ lymphocytes. The proportion of CD3+ T cells, including CD4+ and CD8+ subsets, was increased in the hybrids as compared with published values for laboratory-raised outbred WLH chickens. The proportion of the TCR2+ (Vbeta1) T cell subpopulation was also increased. An age-related decrease in the proportion of TCR1+ (gammasigma) T cells was noted in both hybrids. Further, a remarkably low CD4:CD8 ratio was evident in all age groups of both hybrids, indicating decreased immunocompetence. Overall, these experiments provide age-related proportions of various peripheral-blood T lymphocyte subpopulations in commercially raised Dekalb Delta and H&N chickens that diverge from the proportions in laboratory-raised outbred WLH chickens and suggest reduced immunocompetence. Such a decline in immunocompetence, including humoral immune capacity, could be attributed to genetic selection for production traits, environmental factors associated with commercial operations, and intense immunization.

Risk factors associated with poult enteritis mortality syndrome-positive turkey flocks.

Poult enteritis mortality syndrome (PEMS) has been an economically devastating disease in North Carolina since the early 1990s. Though much is known about the disease, many questions remain unanswered about the syndrome, including its cause, transmission of causative agent(s), and control methods. This study was designed to investigate the association between PEMS and farm management factors. A prospective longitudinal study was conducted by collecting farm data and monitoring weekly mortality in 54 commercial turkey flocks raised in PEMS-affected regions. Univariate and multivariate statistical analyses revealed that enhancing rodent control methods was negatively associated (P = 0.0228) with PEMS.

Rapid Assessment of the Microbiological Quality of Poultry Carcasses Using ATP Bioluminescence.

The meat industry is in need of faster and more reliable methods to determine microbial loads in food products. A rapid method (<15 min) has been developed to assess the microbiological quality of chicken carcasses using the adenosine triphosphate (ATP) bioluminescence assay. The results indicate that, following modifications, the ATP bioluminescence test produced an acceptable correlation with plate counts (r = 0.85, p < 0.001) and demonstrated good repeatability between replicates. It is envisaged that the modified ATP bioluminescence assay would best be used as a platform rejection test. Using threshold levels determined from the regression equation, the ATP bioluminescence assays gave about 90% agreement with plate counts for carcass rinses with counts above 5 × 104 CFU/ml. These findings suggest that the modified ATP bioluminescence assay could be used for monitoring critical control points (CCPs) in programs based on hazard analysis of critical control points (HACCP).