Chest Wall Motion Model of Cardiac Activity for Radar-Based Vital-Sign-Detection System.

An increasing number of studies on non-contact vital sign detection using radar are now beginning to turn to data-driven neural network approaches rather than traditional signal-processing methods. However, there are few radar datasets available for deep learning due to the difficulty of acquiring and labeling the data, which require specialized equipment and physician collaboration. This paper presents a new model of heartbeat-induced chest wall motion (CWM) with the goal of generating a large amount of simulation data to support deep learning methods. An in-depth analysis of published CWM data collected by the VICON Infrared (IR) motion capture system and continuous wave (CW) radar system during respiratory hold was used to summarize the motion characteristics of each stage within a cardiac cycle. In combination with the physiological properties of the heartbeat, appropriate mathematical functions were selected to describe these movement properties. The model produced simulation data that closely matched the measured data as evaluated by dynamic time warping (DTW) and the root-mean-squared error (RMSE). By adjusting the model parameters, the heartbeat signals of different individuals were simulated. This will accelerate the application of data-driven deep learning methods in radar-based non-contact vital sign detection research and further advance the field.

Detecting sediment recovery below an offshore longline mussel farm: A macrobenthic Biological Trait Analysis (BTA).

Expansion of bivalve aquaculture offshore reports lower environmental impacts compared to inshore farms. Taking a Before-After Control-Impact approach, this study presents the first functional diversity analysis and long-term Biological Trait Analysis (BTA) of infauna functional traits following the development of the United Kingdom's first large-scale, offshore longline mussel farm. Located in an area historically impacted by mobile fishing gear, farm sites had the greatest number of taxa and abundance compared to control sites. Functional diversity varied significantly across treatments (farm, near control, far control); while Functional Diversity, Richness, Divergence and Dispersion increased over time within the farm, Functional Evenness and Redundancy decreased. Bioturbation, body size, diet, feeding mode, life span, motility, sediment position, sensitivity and substrate type were chosen for Community-level Weighted Mean analysis, depicting the most frequently affected biological traits by shellfish farming. Farm sites developed a wider range of traits enhancing ecosystem function and habitat recovery after years of seabed damage. Outcomes support the use of functional diversity and BTA analysis to perform ecosystem assessment, supporting decision-makers implement policy and management.

Ellenberg Indicator Values Disclose Complex Environmental Filtering Processes in Plant Communities along an Elevational Gradient.

Ellenberg indicator values (EIVs) express plant preferences for temperature, light, continentality, soil moisture, pH, and soil nutrients, and have been largely used to deduce environmental characteristics from plant communities. However, EIVs might also be used to investigate the importance of filtering mechanisms in shaping plant communities according to species ecological preferences, a so far overlooked use of EIVs. In this paper, we investigated how community-weighted means (CWM), calculated with EIVs, varied along an elevational gradient in a small mountain in Central Italy. We also tested if species abundances varied according to their ecological preferences. We found that the prevalence of thermophilous species declines with elevation, being progressively replaced by cold-adapted species. Heliophilous species prevail at low and high elevations (characterized by the presence of open habitats), whereas in the middle of the gradient (occupied by the beech forest), sciophilous species predominate. Variations for moisture and soil nutrient preferences followed a similar pattern, probably because of the high moisture and nutrient levels of forest soils with a lot of humus. No distinct pattern was detected for EIVs for pH and continentality since these factors are subject to more local variations. These results highlight the possible role of EIVs to investigate how environmental gradients shape plant communities.

Acidic electrolyzed water treatment retards softening and retains cell wall polysaccharides in pulp of postharvest fresh longans and its possible mechanism.

Effects of acidic electrolyzed water (AEW) treatment (pH = 2.5, ACC = 80 mg L-1, 10 min) on pulp firmness, amounts of CWM and CWP, activities and expression of relevant genes of CWDEs in pulp of Fuyan longan during storage at 25 °C were evaluated. Compared to control samples, during storage, AEW-treated fruit retained a higher pulp firmness, prevented WSP formation, reduced the degradation of CSP, cellulose and hemicellulose, and lowered CWDEs activities and their corresponding gene expression. When stored for 5 d, pulp firmness (113.6 g mm-1), CWM (13.9 g kg-1), and CSP (1.4 g kg-1) in AEW-treated fruit displayed the clearly higher contents than those in control samples. These data suggest that AEW treatment can slow down the pulp softening and retain higher pulp CWP levels in postharvest fresh longans, which was because AEW lowered activities of CWDEs and its gene expression levels, and maintained the cell wall structure's integrity.

N-Induced Species Loss Dampened by Clipping Mainly Through Suppressing Dominant Species in an Alpine Meadow.

Nitrogen addition and clipping can exert substantial impact on species diversity but their interactions and the underlying mechanisms still remain unclear. Resource competition theory holds that sufficiently strong competitive ability of dominant species can lead to the losses of subordinate species through competitive exclusion, while niche differentiation theory suggests that the persistence of subordinate species in competitive systems can be promoted by guaranteeing positive growth rates of rare species. Taking advantage of a field experiment with nitrogen addition (10 g N m-2 year-1) and different clipping intensities (2, 15, and 30 cm) treatments in a Tibetan alpine meadow across 2015-2020, we assessed the relative importance of competitively dominant species and niche differentiation in driving species diversity changes via using community weighted mean (CWM) and variation coefficient of nearest neighbor distance (CV_NND) of functional traits including height, specific leaf area (SLA) and leaf dry matter content (LDMC). We show that nitrogen enrichment drove a strong plant diversity loss (P < 0.001). Clipping at different intensities had little effect on species diversity, but it can reduce the N-induced diversity loss. Nitrogen addition and clipping caused changes in community diversity were mainly indirectly attributed to their effects on community functional composition, and the competitive ability of dominant species. Nitrogen increased the CWM of functional traits to improve the competitive ability of dominant species. In contrast, clipping influenced species diversity positively by decreasing CWMheight (P < 0.001), and also negatively by increasing CWMSLA (P < 0.001) and decreasing CV_NNDSLA (P < 0.05). Interacting with N addition, clipping resulted in a neutral effect on species diversity, because clipping could offset the negative effects of nitrogen addition through an opposite effect on CWMheight. This study provides new insights into the mechanisms of diversity maintenance with respect to nitrogen addition and clipping. Thus, clipping is recommended as a useful management strategy to alleviate the species loss caused by nutrients enrichment and maintain the diversity of grassland ecosystems.

Mutual Pan-African support paradigm to produce scientific evidence of traditional medical practices for use against COVID-19 and emerging pandemics.

Africa is endowed with a profoundly rich and diverse system of plants and other bio-resources out of which, by traditional medicine practice, the people have satisfied their healthcare needs right from antiquity. In contemporary times, it has become necessary to modernize this traditional medical care system via scientific studies. Validation of the efficacy of health-enhancement products and drugs from plants and other bio-resources is predicated on diligent and intensive research accompanied by rigorous and conclusive clinical trials. Africa has eminently qualified human resources but due to the finance-intensive nature of medical research, individual African states on their own cannot fund the level of research desired for dealing with such serious issues as the COVID-19 pandemic. A collaboration among African states guided by a Mutual Pan-African support paradigm (MPASP) is a unique strategy for achieving success in any such a high-impact global project as the use of traditional medicine against COVID-19 and emerging pandemics; and this is hereby advocated.

Rapid functional shifts across high latitude forests over the last 65 years.

Global environmental changes have strongly affected forest demographic rates, particularly amplified tree mortality in high latitude forests (e.g., two to five times greater mortality probability over the half-century). Although forest functional composition is critical for multitrophic biodiversity and ecosystem functioning, it remains unclear how functional composition has changed over time across large high latitude regions, which have been warming twice the rate of the globe as a whole. Using extensive spatial and long-term forest inventory data (17,107 plots monitored 1951-2016) across Canada, we found that after accounting for stand age-dependent functional shifts, functional composition shifted toward fast-growing deciduous broadleaved trees and higher drought tolerance over time. The temporal shift toward deciduous broadleaved trees was consistent across the baseline climate. However, over the study period, drought tolerance increased (or shade tolerance decreased) by 300% in colder boreal regions, while drought tolerance did not shift significantly in warmer temperate climates. A further analysis accounting for temporal changes in atmospheric CO2 , temperature, and water availability indicated that the functional composition of colder regions shifted toward drought tolerance more rapidly with rising CO2 than warmer regions, suggesting the greater vulnerability of boreal forests than temperate forests under ongoing global environmental changes. Future ecosystem management practices should consider spatial differences in functional responses to global environmental change, focusing on high latitude forests experiencing higher rates of warming and compositional changes.

Abundance-weighted plant functional trait variation differs between terrestrial and wetland habitats along wide climatic gradients.

Patterns of plant trait variation across spatial scales are important for understanding ecosystem functioning and services. However, habitat-related drivers of these patterns are poorly understood. In a conceptual model, we ask whether and how the patterns of within- and among-site plant trait variation are driven by habitat type (terrestrial vs. wetland) across large climatic gradients. We tested these through spatial-hierarchical-sampling of leaves in herbaceous-dominated terrestrial and wetland communities within each of 26 sites across China. For all 13 plant traits, within-site variation was larger than among-site variation in both terrestrial and wetland habitats. Within-site variation was similar in most leaf traits related to carbon and nutrient economics but larger in specific leaf area and size-related traits (plant height, leaf area and thickness) in wetland compared to terrestrial habitats. Among-site variation was larger in terrestrial than wetland habitats for 10 leaf traits but smaller for plant height, leaf area and leaf nitrogen. Our results indicate the important role of local ecological processes in driving plant trait variation among coexisting species and the dependence of functional variation across habitats on traits considered. These findings will help to understand and predict the effects of climatic or land-use changes on ecosystem functioning and services.

Which Pitfall Traps and Sampling Effort to Choose to Evaluate Cropping System Effects on Spider and Carabid Assemblages?

In arable agroecosystems, arthropod communities often have a reduced abundance and diversity, which represents a challenge for sampling techniques needed to detect small differences among these simplified communities. We evaluated the suitability of pitfall traps for comparing the effects of cropping systems on arthropod communities. In a field experiment, we compared the effects of two pitfall trap diameters, the type of preserving fluid and the sampling effort on three metrics (activity density, taxonomic richness, and community weighted mean [CWM] of body size) for carabids and spiders. Trap size affected the observed composition of communities, with large traps yielding a higher proportion of spiders, and a higher richness and CWM body size for both taxa. The type of preserving fluid had a weaker effect. Simulations with various sampling efforts showed that only very different communities could be distinguished with less than 10 traps per field or less than 30 field replicates. Fewer traps were required to find differences between cropping systems for body size than for other metrics. Carabid activity density and body size, and spider genus richness, were the variables better distinguishing between cropping systems with the smallest sampling effort. A high sampling effort was required for comparing activity density and richness across cropping systems. Selection of the most appropriate trap design, metrics, and crops are the main factors for optimizing the trade-off between sampling effort and the ability to detect arthropod community responses to habitat management.

The effects of early-treated phenylketonuria on volumetric measures of the cerebellum.

Past murine studies of phenylketonuria (PKU) have documented significant effects on cerebellum at both the gross and cellular levels. The profile of neurocognitive and motor difficulties associated with early-treated PKU (ETPKU) is also consistent with potential cerebellar involvement. Previous neuroanatomical studies of cerebellum in patients with PKU, however, have yielded mixed results. The objective of the present study was to further examine potential differences in cerebellar morphometry between individuals with and without ETPKU. To this end, we analyzed high resolution T1-weighted MR images from a sample of 20 individuals with ETPKU and an age-matched comparison group of 20 healthy individuals without PKU. Measurements of whole brain volume, whole cerebellum volume, cerebellar gray matter volume, and cerebellar white matter volume were collected by means of semiautomatic volumetric analysis. Data analysis revealed no significant group differences in whole brain volume, whole cerebellar volume, or cerebellar white matter volume. A significant reduction in cerebellar gray matter volume, however, was observed for the ETPKU group compared to the non-PKU comparison group. These findings expand on previous animal work suggesting that cerebellar gray matter is impacted by PKU. It is also consistent with the hypothesis that the cognitive difficulties experienced by individuals with ETPKU may be related to disruptions in gray matter. Additional studies are needed to fully elucidate the timing and extent of the impact of ETPKU on cerebellum and the associated neurocognitive consequences.

Effect of aridity on species assembly in gypsum drylands: a response mediated by the soil affinity of species.

Previous studies found that plant communities on infertile soils are relatively resistant to climatic variation due to stress tolerance adaptations. However, the species assemblies in gypsum soil habitats require further investigation. Thus, we considered the following questions. (1) Do harsher arid conditions determine the characteristics of the species that form plant assemblages? (2) Is the selection of the species that assemble in arid conditions mediated by their ability to grow on gypsum soils? (3) Is the selection of species that assemble in harsher conditions related to phylogenetically conserved functional traits? Perennial plant communities were analysed in 89 gypsum-soil sites along a 400 km climate gradient from the central to southeastern Iberian Peninsula. Each local assemblage was analysed in 30 × 30 m plots and described based on taxonomic, functional (soil plant affinity) and phylogenetic parameters. The mean maximum temperatures in the hottest month, mean annual precipitation and their interaction terms were used as surrogates for the aridity conditions in generalized linear models. In the hottest locations, the gypsophily range narrowed and the mean gypsophily increased at the community level, thereby suggesting the filtering of species and the dominance of soil specialists in the actual plant assemblies. Drier sites had higher taxonomic diversity. The species that formed the perennial communities were close in evolutionary terms at the two ends of the aridity gradient. The mean maximum temperatures in the hottest month had the main abiotic filtering effect on perennial plant communities, which was mediated by the ability of species to grow on gypsum soils, and thus gypsum specialists dominated the species assemblies in the hottest locations. In contrast, the perennial communities on gypsum soils were relatively resistant to changes in precipitation. Our findings suggest that the warmer environmental conditions predicted by global change models will favour gypsum specialists over generalists.

Aeration intensity simulation in a saturated vertical up-flow constructed wetland.

Simulation and performance results of a saturated vertical up-flow constructed wetland (SVU CW) operated under different operational conditions are presented. The SVU CW consists of two different systems planted with Cyperus alternifolius and Iris pseudacorus, and each system consists of three SVU beds operated in series. The SVU CW operates in continuous aeration (CA) mode using different air-water ratios from 0.5:1 to 4:1. The aerated SVU CW achieves a high (more than 85%) removal of chemical oxygen demand (COD), ammonium (NH4+-N), total nitrogen (TN) and total phosphorus (TP). Furthermore, we simulate the SVU CW using the HYDRUS Wetland Module using the CWM1 biokinetic model under CA mode. According to the simulation results, aeration intensity controls the substrate distribution and growth of bacteria with depth in the SVU CW. Organic matter (OM) and nitrogen are removed in the top region (0-30 cm) of the SVU CW. The root mean square error for COD and NH4+-N is >1.5, whereas R2 is >0.99. A good match between observed and simulated data suggests that the CWM1 model is a suitable tool for simulating various processes and bacterial dynamics in aerated SVU CWs.

Species composition and plant traits of south Atlantic European coastal dunes and other comparative data.

The data reported in this article relates to the research article entitled "Changes in plant diversity patterns along dune zonation in south Atlantic European coasts" (Torca et al., 2019) [1]. Data about traits of species from coastal dunes, a synoptic table and PERMANOVA comparisons are given. The information detailed in the methodology section can be used as a guide to perform analyses on taxonomic, functional and phylogenetic diversity.

Body Length Determines the Diet and Niche Specialization of Non-Biting Midge Predator (Tanypodinae) Larvae in Shallow Reservoirs.

The functional traits of species respond to environmental gradient changes, which, in turn, are responsible for the niche specialization of species. We analyzed the niche specialization of several Tanypodinae taxa (predatory non-biting midge, 4th instar, n = 693) along the depth zones of the water in six shallow tropical reservoirs. We measured the body length and diet composition of seven Tanypodinae larvae genus. Community-weighted mean (CWM) traits index was utilized to calculate the niche distribution of body length and diet composition. We analyzed the niche distribution of predator larvae, through a simple linear analysis of CWM index and the depth of the water, and by establishing correlations between body length and diet composition. In our study, it was found that the consumption of oligochaete (b = 0.30, SE ± 0.04, t = 7.02, p = 0.0001, R2 = 0.45) and the body length (b = 0.64, SE ± 0.11, t = 5.44, p = 0.0001, R2 = 0.33) increased in deeper zones. We observed a strong and positive relationship between oligochaete consumption and a longer body (r = 0.91, p = 0.0001). We inferred that changes in habitat characteristics, from littoral to deeper zones of the reservoirs, are expected to have influenced the selection of larvae traits predators. We concluded that body length determines the diet consumption and accurately reflects the niche distribution of Tanypodinae assemblages. The functional trait approach proved to be an efficient tool for the analysis of the ecological processes that determine the structure of a non-biting midge predator assemblage.

Effect of key design parameters on bacteria community and effluent pollutant concentrations in constructed wetlands using mathematical models.

Constructed wetlands are currently recognized as an effective environmental biotechnology for wastewater treatment, but the influence of their design parameters on internal functioning and contaminant removal efficiency is still under discussion. In this work, the effect of aspect ratio and water depth on bacteria communities as well as treatment efficiency of horizontal subsurface flow constructed wetlands (HSSF) under the Mediterranean climate was evaluated, using a mathematical model. For this purpose, experimental results from four pilot-scale wetlands of equal surface area but different aspect ratios and water depth were used. The HSSF system was fed with municipal wastewater. The experimental data were simulated using the BIO_PORE model, developed in the COMSOL Multiphysics™ platform. Simulations with the BIO_PORE model fitted well to the experimental results, showing a higher removal efficiency for the shallower HSSF for COD (93.7% removal efficiency) and ammonia nitrogen (73.8%). The aspect ratio had a weak relationship with the bacteria distribution and the removal efficiency. In contrast, the water depth was a factor. The results of the present study confirm a previous hypothesis in which depth has an important impact on the biochemical reactions causing contaminants transformation and degradation.

Vegetation ecology meets ecosystem science: Permanent grasslands as a functional biogeography case study.

The effect of biodiversity on ecosystem functioning has been widely acknowledged, and the importance of the functional roles of species, as well as their diversity, in the control of ecosystem processes has been emphasised recently. However, bridging biodiversity and ecosystem science to address issues at a biogeographic scale is still in its infancy. Bridging this gap is the primary goal of the emerging field of functional biogeography. While the rise of Big Data has catalysed functional biogeography studies in recent years, comprehensive evidence remains scarce. Here, we present the rationale and the first results of a country-wide initiative focused on the C3 permanent grasslands. We aimed to collate, integrate and process large databases of vegetation relevés, plant traits and environmental layers to provide a country-wide assessment of ecosystem properties and services which can be used to improve regional models of climate and land use changes. We outline the theoretical background, data availability, and ecoinformatics challenges associated with the approach and its feasibility. We provide a case study of upscaling of leaf dry matter content averaged at ecosystem level and country-wide predictions of forage digestibility. Our framework sets milestones for further hypothesis testing in functional biogeography and earth system modelling.

Simulation of batch-operated experimental wetland mesocosms in AQUASIM biofilm reactor compartment.

In this study, a mathematical biofilm reactor model based on the structure of the Constructed Wetland Model No.1 (CWM1) coupled to AQUASIM's biofilm reactor compartment has been used to reproduce the sequence of transformation and degradation of organic matter, nitrogen and sulphur observed in a set of constructed wetland mesocosms and to elucidate the development over time of microbial species as well as the biofilm thickness of a multispecies bacterial biofilm in a subsurface constructed wetland. Experimental data from 16 wetland mesocosms operated under greenhouse conditions, planted with three different plant species (Typha latifolia, Carex rostrata, Schoenoplectus acutus) and an unplanted control were used in the calibration of this mechanistic model. Within the mesocosms, a thin (predominantly anaerobic) biofilm was simulated with an initial thickness of 49 µm (average) and in which no concentration gradients developed. The biofilm density and area, and the distribution of the microbial species within the biofilm were evaluated to be the most sensitive biofilm properties; while the substrate diffusion limitations were not significantly sensitive to influence the bulk volume concentrations. The simulated biofilm density ranging between 105,000 and 153,000 gCOD/m(3) in the mesocosms was observed to vary with temperature, the presence as well as the species of macrophyte. The biofilm modeling was found to be a better tool than the suspended bacterial modeling approach to show the influence of the rhizosphere configuration on the performance of the constructed wetlands.

Methyl jasmonate treatment induces changes in fruit ripening by modifying the expression of several ripening genes in Fragaria chiloensis fruit.

To investigate the role of jasmonates (JAs) in the ripening of Fragaria chiloensis fruit, two concentrations of methyl jasmonate (MeJA, 10 and 100 µM) were evaluated at 2, 5 and 9 d using an in vitro ripening system. Fruit quality parameters; the contents of anthocyanin, lignin and cell wall polymers; and the transcriptional profiles of several ripening-related genes were analyzed. MeJA accelerated fruit ripening by means of a transitory increase in the soluble solid content/titratable acidity ratio, anthocyanin accumulation and an increase in softening at day 5. The expression of several phenylpropanoid-related genes, primarily those associated with anthocyanin biosynthesis, was increased under MeJA treatment, which correlated with an increased accumulation of anthocyanin. MeJA also altered the expression profiles of some cell wall-modifying genes, namely, EG1 and XTH1, and these changes correlated with a transient reduction in the firmness of MeJA-treated fruits. MeJA-responsive elements were observed in the promoter region of the EG1 gene. MeJA also increased the expression of LOX, AOS and OPR3, genes involved in the biosynthesis of JAs, and these changes correlated with the transient activation of fruit ripening observed. Conversely, the expression of ethylene and lignin biosynthesis genes (ACS, ACO, CAD and POD27) increased in MeJA-treated fruits at day 9. The present findings suggest that JAs promote the ripening of non-climacteric fruits through their involvement in anthocyanin accumulation, cell wall modification and the biosynthesis of ethylene and JAs.

From forests to cattail: how does the riparian zone influence stream fish?

The aim of this study was to verify whether taxonomic and functional composition of stream fishes vary under three different preservation conditions of riparian zone: preserved (PRE), intermediate condition (INT), and degraded (DEG). Five stream stretches representing each condition were selected. Samples were taken from each stream in three occasions during the dry seasons from 2004 to 2007. Electro fishing (PRE and INT), sieves, dip nets, and hand seines (DEG) were used according to the characteristics of each sampled site. Overall, 46 species were registered. Differences in the taxonomic and functional species composition among groups were found, following the condition of riparian zones. The ichthyofauna recorded in the PRE was typical to pristine environments, consisting of species with specialized habits, notably benthic insectivores, intolerant, and rheophilics. In the INT group, replacement of riparian forest with shrubs and/or grasses created environmental conditions which favor the occurrence of tolerant species but also harbor a residual fauna of sensitive species. DEG streams presented mostly detritivores, tolerant, small sized fishes which occupy the surface and preferred slow water flux. Changes in the species composition were represented by the occurrence and dominance of tolerant species in detriment of the more sensitive and specialist species, following the gradient of degradation in the riparian zone. Forested streams act as unique habitats to many specialized species and it can be presumable that the degradation of riparian vegetation can generate biotic homogenization which may reduce species diversity and ecosystem services.

O presente estudo verificou se a composição taxonômica e funcional de peixes de riachos varia ao longo de três condições de preservação da zona ripária: preservada (PRE), preservação intermediária (INT) e degradada (DEG). Cinco riachos de cada grupo foram selecionados e amostras foram obtidas em cada riacho em três ocasiões em períodos secos de 2004 a 2007. Pesca elétrica (PRE e INT), peneiras, puçás e redes de arrasto (DEG) foram usados de acordo com as características de cada local de coleta. No geral, 46 espécies foram registradas. Foram registradas diferenças na composição taxonômica e funcional de espécies entre os grupos, seguindo o gradiente de degradação da zona ripária. A ictiofauna encontrada em PRE foi típica de ambientes prístinos, consistindo em espécies de hábitos especializados, notavelmente bentônicas, insetívoras, intolerantes e reofílicas. No grupo INT, a substituição da floresta ripária por herbáceas ou gramíneas cria condições ambientais que favorecem a ocorrência de espécies tolerantes, mas também abriga uma fauna residual de espécies sensíveis. O grupo DEG foi representado principalmente por espécies detritívoras, tolerantes e de superfície. As modificações na composição de espécies foram representadas pela ocorrência e dominância de espécies tolerantes em detrimento da redução/eliminação daquelas mais sensíveis e especializadas, acompanhando o gradiente de degradação da zona ripária. Riachos florestados representam hábitats únicos para muitas espécies especializadas, sendo presumível esperar que a degradação da vegetação ripária cause homogeneização biótica que, por sua vez, pode reduzir a diversidade de espécies e os serviços ecossistêmicos.