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1.
Vet Parasitol Reg Stud Reports ; 54: 101096, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39237237

RESUMO

The giant African land snail Achatina fulica is known to be the intermediate host of a number of nematode species that are prejudicial to human and veterinary health, being also an agricultural and urban pest. The present study investigated the presence of nematodes in A. fulica and other terrestrial mollusks in 24 municipalities of Sergipe State, northeastern of Brazil, in the dry and rainy seasons. In 2019 and 2020, the specimens were collected in standard 20 m × 10 m plots (10 min/01 collector), while in 2021, they were collected by convenience sampling. The nematode species were identified based on sequencing of the mitochondrial Cytochrome C Oxidase Subunit I (COI) gene and the ribosomal nuclear Internal Transcribed Spacer (ITS 2). Specimens of A. fulica infected with Angiostrongylus cantonensis, a nematode that causes eosinophilic meningitis (EM) in humans and animals, were collected in four municipalities. Two nematodes of veterinary importance were also identified, Aelurostrongylus abstrusus and Cruzia tentaculata in seven municipalities. This is the first record of Cruzia tentaculata in Sergipe. Free-living nematodes were also found in 18 municipalities. One of these species - Caenorhabditis briggsae - was identified in the municipality of Itabaiana. Specimens of other mollusks species were also collected. Only one of these mollusks, C. fasciata from Japaratuba, was found infected with free-living nematodes. A. fulica showed greater positivity for nematodes in the dry season, especially in the regions of Lower São Francisco River, Greater Aracaju and South Central Sergipe. The probability of infection increased when mollusks were larger and more recurrent in plots. Given that A. cantonensis is the etiological agent of EM and was found associated to A. fulica in four municipalities, it will be important to implement programs of continuous monitoring of the mollusk's fauna, combined with educational programs that provide information necessary to control A. fulica.


Assuntos
Caramujos , Animais , Brasil/epidemiologia , Caramujos/parasitologia , Nematoides/isolamento & purificação , Nematoides/classificação , Espécies Introduzidas , Humanos , Estações do Ano
2.
Rev Bras Parasitol Vet ; 33(3): e011224, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39292069

RESUMO

Populations of freshwater species have been declining rapidly and species are becoming extinct. Thus, understanding freshwater species distribution, trends and patterns is required. The Munim River basin is situated in a region with a phytogeographic interface between the Amazon and Cerrado biomes. Although the Munim basin ichthyofauna is currently relatively well-known, data on its helminth fauna is scarce. The present study aimed to characterize the nematofauna of Bryconops cf. affinis (Günther) and Saxatilia brasiliensis (Bloch) from two different localities in the middle section of the Munim River, and thus to contribute to the knowledge of biodiversity in this region. Specimens of Bryconops cf. affinis were parasitized with the nematodes Procamallanus (Spirocamallanus) krameri (Petter, 1974) and "Porrocaecum-like" species (larvae) in both localities. Saxatilia brasiliensis presented the nematodes P. (S.) krameri, Pseudoproleptus sp. (larvae), Cucullanus sp. and Procamallanus sp. (larvae). Procamallanus (S.) krameri was found parasitizing S. brasiliensis only from the Feio stream. Morphometric data and parasitological parameters are given. The present study provides the first record of nematodes for B. cf. affinis and for S. brasiliensis contributing to the knowledge of the helminth fauna of freshwater fishes from locations that have not yet been studied, such as the Munim River basin.


Assuntos
Caraciformes , Rios , Animais , Brasil , Caraciformes/parasitologia , Nematoides/classificação , Nematoides/isolamento & purificação , Ciclídeos/parasitologia
3.
J Helminthol ; 98: e48, 2024 Aug 27.
Artigo em Inglês | MEDLINE | ID: mdl-39189368

RESUMO

This article presents a checklist of metazoan parasites of snakes from Argentina, along with a comprehensive review of the relevant literature published between 1922 and June 2023, covering various aspects of interest. We compiled 34 species of metazoan endoparasites from 28 studies. The subclass Digenea showed the highest number of species (n = 22 species), followed by the phylum Nematoda (n = 8 species), and the subclass Pentastomida (n = 3 species and 1 taxa inquirenda). Dipsadidae was the family of snakes with the most species examined for metazoan endoparasites (n = 20 species). In contrast, Viperidae had the largest number of specimens surveyed (n = 343). Of 23 provinces, 15 (65.2%) presented at least one report of metazoan endoparasites in snakes. The northeastern provinces showed the highest richness of metazoan endoparasites and host diversity. Many articles focused on taxonomy, but studies on parasite ecology were not found. Although taxonomic accuracy was high in most reports, some records were correctly deposited in zoological collections or geo-referenced. This is the first attempt to include all groups of metazoan endoparasites of snakes from Argentina in a single checklist in the last century.


Assuntos
Serpentes , Animais , Serpentes/parasitologia , Argentina , Lista de Checagem , Parasitos/classificação , Parasitos/isolamento & purificação , Nematoides/classificação , Nematoides/isolamento & purificação , Doenças Parasitárias em Animais/parasitologia , Doenças Parasitárias em Animais/epidemiologia , Biodiversidade
4.
Vet Parasitol Reg Stud Reports ; 53: 101066, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-39025540

RESUMO

Cuniculus paca, commonly known as the paca, is a rodent of the Cuniculidae family that is widely distributed throughout the Americas, including all Brazilian territories, and is abundant in the Amazon region. It is one of the most hunted species and faces significant predation in the extreme western Amazon region of Brazil because it constitutes a staple in the diet of local communities, for subsistence and commercial purposes. Understanding the helminthic fauna of these animals is of paramount importance, given that some nematodes have zoonotic potential and may pose risks to consumer health. This study aimed to contribute to the records of the nemtodes of this highly consumed species in the Amazon region, highlighting the occurrence of gastrointestinal parasites in free-living pacas intended for human subsistence consumption. The study was conducted in the Paranã da Floresta community, located in the municipality of Guajará, Amazonas from 2022 to 2023. The community members hunted this rodent for consumption and voluntarily provided the viscera for analysis. Nematodes were extracted from each organ. The organs were opened, and the contents were processed using a sieve (0.15 mm) and subsequently evaluated separately. In total, 10,157 nematodes were found in the 14 pacas. Based on morphological analyses, the nematodes were identified as Heligmostrongylus sedecimradiatus (n = 10,068), Trichuris sp. (n = 85), and Physaloptera sp. (n = 4). This study provides insights into the nematodes diversity of free-living pacas in the extreme Western Amazon region, emphasizing the importance of sanitary surveillance and public awareness of the risks associated with bushmeat consumption.


Assuntos
Nematoides , Infecções por Nematoides , Animais , Brasil/epidemiologia , Nematoides/isolamento & purificação , Nematoides/classificação , Infecções por Nematoides/veterinária , Infecções por Nematoides/parasitologia , Infecções por Nematoides/epidemiologia , Cuniculidae/parasitologia , Masculino , Feminino , Doenças dos Roedores/parasitologia , Doenças dos Roedores/epidemiologia , Humanos
5.
Parasitol Int ; 102: 102920, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-38969332

RESUMO

Water frogs of the genus Pelophylax host a variety of parasites, from protozoa to helminths. Among the blood parasites, representatives of Apicomplexa, Trypanosoma and Nematoda show the highest prevalence. In this study, we focused on blood parasites of water frogs living in the Danube Delta, Romania. In total, 74 individuals of P. ridibundus and eight individuals of P. esculentus from six localities were examined. Blood parasites were detected microscopically and using a molecular marker (18S rDNA). 89.77% of frogs from all investigated localities were found to be infected with at least one parasitic group, specifically with haemogregarines (84.09%), nematodes (1.14%), and trypanosomes (63.64%). The parasitemia of haemogregarines and trypanosomes differed significantly among the studied locations. There was no statistically significant difference in parasitemia between male and female hosts. However, adults were found to have a significantly higher parasitemia in comparison with subadults infected with haemogregarines. Correlation between parasitemia and the body length of frogs infected with haemogregarines was also significant (r = 0.226). By comparing the 18S rDNA sequences with the corresponding GenBank sequences, Hepatozoon species identified in water frogs showed a close similarity (98.1-99.8%) to Hepatozoon magna. Trypanosomes showed the highest sequence similarity to Trypanosoma sp. isolate R10 clone L2-3, Trypanosoma ranarum, and Trypanosoma cobitis.


Assuntos
Parasitemia , RNA Ribossômico 18S , Ranidae , Animais , Romênia/epidemiologia , Ranidae/parasitologia , Masculino , Feminino , Parasitemia/veterinária , Parasitemia/parasitologia , Parasitemia/epidemiologia , RNA Ribossômico 18S/análise , Trypanosoma/isolamento & purificação , Trypanosoma/classificação , Trypanosoma/genética , Filogenia , Nematoides/isolamento & purificação , Nematoides/classificação
6.
Parasitol Res ; 123(7): 267, 2024 Jul 11.
Artigo em Inglês | MEDLINE | ID: mdl-38990228

RESUMO

Exsheathment is crucial in the transition from free-living to parasitic phase for most strongyle nematode species. A greater understanding of this process could help in developing new parasitic control methods. This study aimed to identify commonalities in response to exsheathment triggers (heat acclimation, CO2 and pH) in a wide range of species (Haemonchus contortus, Trichostrongylus spp., Cooperia spp., Oesophagostomum spp., Chabertia ovina, and members of the subfamily Ostertagiinae) from sheep, cattle and farmed deer. The initial expectation of similarity in pH requirements amongst species residing within the same organ was not supported, with unexpected pH preferences for exsheathment of Trichostrongylus axei, Trichostrongylus vitrinus, Trichostrongylus colubriformis and Cooperia oncophora. We also found differences between species in their response to temperature acclimation, with higher exsheathment in response to heat shock observed for H. contortus, Ostertagia ostertagi, T. axei, T. vitrinus and Oesophagostomum sikae. Furthermore, some species showed poor exsheathment under all experimental conditions, such as Cooperia curticei and the large intestinal nematodes C. ovina and Oesophagostomum venulosum. Interestingly, there were some significant differences in response depending on the host from which the parasites were derived. The host species significantly impacted on the exsheathment response for H. contortus, Teladorsagia circumcincta, T. vitrinus and T. colubriformis. Overall, the data showed variability between nematode species in their response to these in vitro exsheathment triggers, highlighting the complexity of finding a common set of conditions for all species in order to develop a control method based on triggering the exsheathment process prematurely.


Assuntos
Cervos , Infecções por Nematoides , Doenças dos Ovinos , Animais , Cervos/parasitologia , Bovinos , Ovinos/parasitologia , Doenças dos Ovinos/parasitologia , Infecções por Nematoides/parasitologia , Infecções por Nematoides/veterinária , Concentração de Íons de Hidrogênio , Nematoides/fisiologia , Nematoides/classificação , Doenças dos Bovinos/parasitologia , Dióxido de Carbono , Enteropatias Parasitárias/veterinária , Enteropatias Parasitárias/parasitologia , Temperatura Alta
7.
Parasitol Int ; 102: 102914, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-38908472

RESUMO

Knowledge of parasite-host interactions is essential for understanding factors associated with the ecology and evolution of both groups. Some aspects, such as host size and phylogeny, as well as parasite specificity, are significant predictors that help unveil the parasite-host relationship. Thus, the goals of this study were: (1) to describe parasite diversity in regions of the Atlantic Forest; (2) to analyze which host characteristics can influence parasite richness of anuran's parasite component community; and (3) to investigate if the prevalence of parasite infection is related to specificity metrics (ecological and phylogenetic), number of infected hosts and parasite's abundance. We identified 49 parasite taxa, classified into three phyla: Nematoda, Acanthocephala, and Platyhelminthes. Supporting the existing literature, our findings corroborate the positive relationship between host size and parasite richness, further emphasizing the significance of this predictor. Parasite prevalence in the host community is related to the number of infected host species and parasite abundance, but not to phylogenetic and ecological specificity indices. This shows that parasite prevalence is strongly associated with infection opportunity, host sampling effort, and high parasite abundance.


Assuntos
Anuros , Biodiversidade , Florestas , Interações Hospedeiro-Parasita , Nematoides , Filogenia , Animais , Anuros/parasitologia , Nematoides/classificação , Brasil/epidemiologia , Acantocéfalos/classificação , Acantocéfalos/fisiologia , Acantocéfalos/isolamento & purificação , Prevalência , Helmintos/classificação , Helmintos/isolamento & purificação , Helmintos/genética , Especificidade de Hospedeiro
8.
J Helminthol ; 98: e45, 2024 Jun 03.
Artigo em Inglês | MEDLINE | ID: mdl-38828717

RESUMO

This review summarises studies on distribution, diversity, and prevalence of gastrointestinal helminth infections in wild ruminants in sub-Saharan Africa. The results showed that 109 gastrointestinal tract (GIT) helminth species or species complexes were recorded in 10 sub-Saharan African countries. South Africa reported the highest number of species because most studies were carried out in this country. Eighty-eight nematode species or species complexes were recorded from 30 wild ruminant species across eight countries. The genus Trichostrongylus recorded the highest number of species and utilised the highest number of wild ruminant species, and along with Haemonchus spp., was the most widely distributed geographically. Fifteen trematode species or species complexes were reported from seven countries. The genus Paramphistomum recorded the highest number of species, and Calicophoron calicophoron was the most commonly occurring species in sub-Saharan African countries and infected the highest number of hosts. Six cestode species or species complexes from one family were documented from 14 wild hosts in seven countries. Moniezia spp. were the most commonly distributed in terms of host range and geographically. Impala were infected by the highest number of nematodes, whilst Nyala were infected by the highest number of trematode species. Greater kudu and Impala harbored the largest number of cestodes. The prevalence amongst the three GIT helminths taxa ranged between 1.4% and 100% for nematodes, 0.8% and 100% for trematodes, and 1.4% and 50% for cestodes. There is still limited information on the distribution and diversity of GIT helminths in wild ruminants in most sub-Saharan African countries.


Assuntos
Trato Gastrointestinal , Helmintíase Animal , Helmintos , Ruminantes , Animais , África Subsaariana/epidemiologia , Ruminantes/parasitologia , Helmintíase Animal/epidemiologia , Helmintíase Animal/parasitologia , Helmintos/classificação , Helmintos/isolamento & purificação , Helmintos/genética , Trato Gastrointestinal/parasitologia , Prevalência , Animais Selvagens/parasitologia , Biodiversidade , Nematoides/classificação , Nematoides/isolamento & purificação
9.
An Acad Bras Cienc ; 96(3): e20230339, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38896740

RESUMO

Cucullanus lithodorasi n. sp. (Nematoda: Cucullanidae), collected from the intestine of Lithodoras dorsalis (Siluriformes) and waters of the north coast of Brazil is described based on light and scanning electron microscopic observations. The new species differs from its congeners in the number and arrangement of cloacal papillae: five precloacal pairs and five postcloacal pairs and presence of unpaired ventral papillae located slightly anterior to the cloaca. This is the third nominal species of the genus infecting fishes from brackish water from Brazil.


Assuntos
Peixes-Gato , Doenças dos Peixes , Microscopia Eletrônica de Varredura , Animais , Brasil , Peixes-Gato/parasitologia , Doenças dos Peixes/parasitologia , Masculino , Feminino , Nematoides/classificação , Nematoides/anatomia & histologia , Nematoides/ultraestrutura , Nematoides/isolamento & purificação
10.
Sci Rep ; 14(1): 13712, 2024 06 14.
Artigo em Inglês | MEDLINE | ID: mdl-38877177

RESUMO

The family Acuariidae is a speciose group of parasitic nematodes, infecting mostly birds as definitive hosts. This study focused on the characterization of two species of acuariids, collected in two different species of piscivorous birds, the European great cormorant Phalacrocorax carbo sinensis from Italy, and the pygmy cormorant Microcarbo pygmaeus from Israel. Parasites were analyzed using light and scanning electron microscopy and by amplification and sequencing of the 28S rDNA. The results of morphological and molecular analyses showed that Ph. carbo sinensis was infected by the acuariid Syncuaria squamata (12 females) and Cosmocephalus obvelatus (1 female), whereas M. pygmaeus was infected by C. obvelatus (2 males, 12 females). The present results provide new data on the distribution of acuariid parasites of piscivorous birds, the first report of Acuariidae in Israel, and the first molecular data on S. squamata and C. obvelatus, which will be useful in future epidemiological and phylogenetic studies of these widely distributed, but less molecularly studied parasites.


Assuntos
Aves , Filogenia , Animais , Aves/parasitologia , Feminino , Masculino , Doenças das Aves/parasitologia , Doenças das Aves/epidemiologia , Nematoides/genética , Nematoides/classificação , Israel , Itália , RNA Ribossômico 28S/genética
11.
Int J Parasitol Drugs Drug Resist ; 25: 100547, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38733882

RESUMO

Anthelmintic resistance in sheep parasitic gastrointestinal nematodes is widespread and a severe health and economic issue but prevalence of resistance and involved parasite species are unknown in Germany. Here, the faecal egg count reduction test (FECRT) was performed on eight farms using fenbendazole, ivermectin and moxidectin and on four farms using only moxidectin. A questionnaire was used to obtain data on management practices to potentially identify risk factors for presence of resistance. All requirements of the recently revised WAAVP guideline for diagnosing anthelmintic resistance using the FECRT were applied. Nematode species composition in pre- and post-treatment samples was analysed with the nemabiome approach. Using the eggCounts statistic package, resistance against fenbendazole, ivermectin and moxidectin was found on 7/8, 8/8 and 8/12 farms, respectively. No formal risk factor analysis was conducted since resistance was present on most farms. Comparison with the bayescount R package results revealed substantial agreement between methods (Cohen's κ = 0.774). In contrast, interpretation of data comparing revised and original WAAVP guidelines resulted in moderate agreement (Cohen's κ = 0.444). The FECR for moxidectin was significantly higher than for ivermectin and fenbendazole. Nemabiome data identified 4 to 12 species in pre-treatment samples and treatments caused a small but significant decrease in species diversity (inverse Simpson index). Non-metric multidimensional scaling and k-means clustering were used to identify common patterns in pre- and post-treatment samples. However, post-treatment samples were scattered among the pre-treatment samples. Resistant parasite species differed between farms. In conclusion, the revised FECRT guideline allows robust detection of anthelmintic resistance. Resistance was widespread and involved multiple parasite species. Resistance against both drug classes on the same farm was common. Further studies including additional drugs (levamisole, monepantel, closantel) should combine sensitive FECRTs with nemabiome data to comprehensively characterise the anthelmintic susceptibility status of sheep nematodes in Germany.


Assuntos
Anti-Helmínticos , Fazendas , Fezes , Macrolídeos , Contagem de Ovos de Parasitas , Doenças dos Ovinos , Animais , Ovinos , Alemanha/epidemiologia , Doenças dos Ovinos/parasitologia , Doenças dos Ovinos/epidemiologia , Contagem de Ovos de Parasitas/métodos , Contagem de Ovos de Parasitas/veterinária , Fezes/parasitologia , Anti-Helmínticos/farmacologia , Macrolídeos/farmacologia , Ivermectina/farmacologia , Infecções por Nematoides/veterinária , Infecções por Nematoides/parasitologia , Infecções por Nematoides/epidemiologia , Infecções por Nematoides/tratamento farmacológico , Fenbendazol/farmacologia , Resistência a Medicamentos , Nematoides/efeitos dos fármacos , Nematoides/classificação , Nematoides/isolamento & purificação
12.
Parasitol Res ; 123(5): 207, 2024 May 07.
Artigo em Inglês | MEDLINE | ID: mdl-38713234

RESUMO

Biomarkers are specific molecular, histological, or physiological characteristics of normal or pathogenic biological processes and are promising in the diagnosis of gastrointestinal nematodes (GINs). Although some biomarkers have been validated for infection by Ostertagia sp. in cattle raised in temperate regions, there is a lack of information for tropical regions. The aim of this project was to assess potential biomarkers and validate the most promising. In the first study, 36 bovines (Nelore breed) naturally infected by GINs were distributed into two groups: infected (not treated with anthelmintic) and treated (treated with fenbendazole on days 0, 7, 14, 21, 28, 42, and 56). The variables of interest were live weight, fecal egg count, hemogram, serum biochemical markers, phosphorus, gastrin, and pepsinogen. In the second step, pepsinogen was assessed in cattle of the Nelore breed distributed among three groups: infected (not treated with anthelmintic), MOX (treated with moxidectin), and IVM + BZD (treated with ivermectin + albendazole). In the first study, no difference between groups was found for weight, albumin, hematocrit (corpuscular volume [CV]), erythrocytes, or hemoglobin. Negative correlations were found between pepsinogen and both CV and albumin, and albumin was negatively correlated with the percentage of Haemonchus sp. in the fecal culture. Among the biomarkers, only pepsinogen differentiated treated and infected (beginning with the 28th day of the study). In the second study, a reduction in pepsinogen was found after anthelmintic treatment. Therefore, pepsinogen is a promising biomarker of worms in cattle naturally infected by the genera Haemonchus and Cooperia in tropical areas.


Assuntos
Biomarcadores , Doenças dos Bovinos , Fezes , Infecções por Nematoides , Clima Tropical , Animais , Bovinos , Doenças dos Bovinos/parasitologia , Doenças dos Bovinos/tratamento farmacológico , Biomarcadores/sangue , Infecções por Nematoides/veterinária , Infecções por Nematoides/parasitologia , Infecções por Nematoides/tratamento farmacológico , Fezes/parasitologia , Contagem de Ovos de Parasitas , Anti-Helmínticos/uso terapêutico , Nematoides/isolamento & purificação , Nematoides/classificação , Nematoides/efeitos dos fármacos , Gastroenteropatias/parasitologia , Gastroenteropatias/veterinária , Enteropatias Parasitárias/veterinária , Enteropatias Parasitárias/parasitologia , Fenbendazol/uso terapêutico
13.
Parasitol Res ; 123(5): 208, 2024 May 10.
Artigo em Inglês | MEDLINE | ID: mdl-38724709

RESUMO

In freshwater ecosystems, parasite infection patterns are influenced by factors including spatial-temporal variations, host diet, and habitat. Fish often change diets, affecting their parasite communities. This study focused on non-native host fish Geophagus sveni, aiming to characterize diet and endoparasitic helminth fauna patterns in the invaded area, investigating spatial and seasonal possible differences of endoparasite infections and correlating with host diet, in São José dos Dourados River and Tietê River areas. The host fish were collected in these areas during the dry and rainy season using gillnets. The endoparasites were collected and preserved in alcohol and identified using taxonomic methods, and stomach contents were examined for diet analysis. Parasitism descriptors were calculated and evaluated spatially and seasonally by ANOVA and the Kruskal-Wallis tests. PERMANOVA assessed G. sveni diet differences, and RDA correlated the endohelminth abundance with the host diet. Two endoparasites were recorded: metacercariae of Austrodiplostomum compactum (Trematoda) and larvae and adults of Raphidascaris (Sprentascaris) lanfrediae (Nematoda). Spatial differences were observed for the mean abundance and prevalence of R. (S.) lanfrediae and A. compactum prevalence. Seasonal variations of parasitic descriptors occurred for the nematode in the Tietê River area. The detritus and aquatic insects were the most consumed items by G. sveni. Detritus consumption positively correlates with nematode abundance. The findings indicate that factors such as artificial channels and rainfall, which can influence resource availability, may affect the fish's diet and potentially influence the structure of its endoparasite community. The study emphasizes the importance of understanding trophic chain-transmitted parasites and calls for further research in Neotropical environments.


Assuntos
Dieta , Doenças dos Peixes , Helmintíase Animal , Rios , Estações do Ano , Animais , Rios/parasitologia , Doenças dos Peixes/parasitologia , Doenças dos Peixes/epidemiologia , Helmintíase Animal/parasitologia , Helmintíase Animal/epidemiologia , Trematódeos/isolamento & purificação , Trematódeos/classificação , Brasil/epidemiologia , Nematoides/isolamento & purificação , Nematoides/classificação , Helmintos/isolamento & purificação , Helmintos/classificação , Conteúdo Gastrointestinal/parasitologia
14.
Mol Ecol Resour ; 24(5): e13965, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38733216

RESUMO

The ITS-2-rRNA has been particularly useful for nematode metabarcoding but does not resolve all phylogenetic relationships, and reference sequences are not available for many nematode species. This is a particular issue when metabarcoding complex communities such as wildlife parasites or terrestrial and aquatic free-living nematode communities. We have used markerDB to produce four databases of distinct regions of the rRNA cistron: the 18S rRNA gene, the 28S rRNA gene, the ITS-1 intergenic spacer and the region spanning ITS-1_5.8S_ITS-2. These databases comprise 2645, 254, 13,461 and 10,107 unique full-length sequences representing 1391, 204, 1837 and 1322 nematode species, respectively. The comparative analysis illustrates the complementary value but also reveals a better representation of Clade III, IV and V than Clade I and Clade II nematodes in each case. Although the ITS-1 database includes the largest number of unique full-length sequences, the 18S rRNA database provides the widest taxonomic coverage. We also developed PrimerTC, a tool to assess primer sequence conservation across any reference sequence database, and have applied it to evaluate a large number of previously published rRNA cistron primers. We identified sets of primers that currently provide the broadest taxonomic coverage for each rRNA marker across the nematode phylum. These new resources will facilitate more comprehensive metabarcoding of nematode communities using either short-read or long-read sequencing platforms. Further, PrimerTC is available as a simple WebApp to guide or assess PCR primer design for any genetic marker and/or taxonomic group beyond the nematode phylum.


Assuntos
Código de Barras de DNA Taxonômico , Nematoides , Animais , Nematoides/genética , Nematoides/classificação , Código de Barras de DNA Taxonômico/métodos , RNA Ribossômico 18S/genética , DNA Espaçador Ribossômico/genética , RNA Ribossômico 28S/genética , Primers do DNA/genética , DNA de Helmintos/genética , Filogenia , Metagenômica/métodos
15.
PeerJ ; 12: e17355, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38708361

RESUMO

Three new species of the Microlaimus genus (Nematoda: Microlaimidae) are described from sample sediments collected in the South Atlantic, along the Continental Shelf break of Northeastern Brazil. Microlaimus paraundulatus sp. n. possesses four setiform cephalic sensillae, a buccal cavity with three small teeth, arched and slender spicules and a wave-shaped gubernaculum. Microlaimus modestus sp. n. is characterized by four small cephalic sensillae, a buccal cavity with three teeth (one large dorsal tooth), cephalated spicules and a strongly arched gubernaculum in the distal region. Microlaimus nordestinus sp. n. is characterized by the following set of features: relatively long body, eight rows of hypodermal glands that extend longitudinally along the body and a funnel-shaped gubernaculum surrounding the spicules at the distal end. An amendment of the diagnosis is proposed for the genus.


Assuntos
Sedimentos Geológicos , Animais , Brasil , Oceano Atlântico , Sedimentos Geológicos/parasitologia , Masculino , Nematoides/classificação , Nematoides/anatomia & histologia , Nematoides/isolamento & purificação , Feminino
16.
J Helminthol ; 98: e42, 2024 May 27.
Artigo em Inglês | MEDLINE | ID: mdl-38798016

RESUMO

Four species of the genus Longidorus were recovered from southern (Bushehr province) and southeastern (Southern Khorasan province) Iran. The first species, L. paratabrizicus n. sp. represents a new member to the genus and is characterised by 4.8-5.6 mm long females with anteriorly flattened lip region separated from the rest of the body by depression, amphidial fovea pocket-shaped without lobes, tail conical, dorsally convex, ventrally almost straight with bluntly rounded tip and males in population. By having similar lip region and tail shape, the new species most closely resembles five species viz. L. artemisiae, L. globulicauda, L. patuxentensis, L. sturhani, and L. tabrizicus. It represents the cryptic form of the last species. The second species belongs to L. mirus, recovered in both southern and southeastern Iran, representing the first record of the species after its original description. As an update to the characteristics of this species, it's all juvenile developmental stages were recovered and described. The criteria to separate L. mirus from two closely related species, L. auratus and L. africanus, are discussed. The third species belongs to L. persicus, a new record in southern Iran. The fourth species, L. orientalis was recovered in high population density in association with date palm trees in Bushehr province. The phylogenetic relationships of the new species and recovered populations of L. mirus and L. persicus were reconstructed using two ribosomal markers and the resulted topologies were discussed.


Assuntos
Filogenia , Irã (Geográfico) , Animais , Masculino , Feminino , Nematoides/classificação , Nematoides/anatomia & histologia , Nematoides/genética , Microscopia
17.
J Helminthol ; 98: e39, 2024 May 10.
Artigo em Inglês | MEDLINE | ID: mdl-38726571

RESUMO

During nematode surveys of natural vegetation in forests of La Cima de Copey de Dota, San José, San José province, Costa Rica, a Xenocriconemella species closely resembling X. macrodora and related species was found. Integrative taxonomical approaches demonstrated that it is a new species described herein as X. costaricense sp. nov. The new species is parthenogenetic (only females have been detected) and characterised by a short body (276-404 µm); lip region with two annuli, not offset, not separated from body contour; first lip annulus partially covering the second lip annulus. Stylet thin, very long (113-133 µm) and flexible, occupying 30.5-47.8% of body length. Excretory pore located from one or two annuli anterior to one or two annuli posterior to level of stylet knobs, at 42 (37-45) µm from anterior end. Female genital tract monodelphic, prodelphic, outstretched, and occupying 35-45% of body length, with vagina slightly ventrally curved (14-18 µm long). Anus located 6-11 annuli from the tail terminus. Tail conoid and bluntly rounded terminus, the last 2-3 annuli oriented dorsally. Results of molecular characterisation and phylogenetic analyses of D2-D3 expansion segments of 28S rRNA, ITS, and partial 18S rRNA, as well as cytochrome oxidase c subunit 1 gene sequences further characterised the new species and clearly separated it from X. macrodora and other related species (X. iberica, X. paraiberica, and X. pradense).


Assuntos
Filogenia , Animais , Costa Rica , Feminino , Masculino , Nematoides/classificação , Nematoides/anatomia & histologia , Nematoides/genética , DNA Ribossômico/genética , RNA Ribossômico 28S/genética , DNA de Helmintos/genética , Florestas , Análise de Sequência de DNA
18.
Parasitology ; 151(5): 529-538, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38659195

RESUMO

A comprehensive investigation, incorporating both morphological and molecular analyses, has unveiled the existence of a hitherto unknown nematode species, Paracapillaria (Ophidiocapillaria) siamensis sp. nov., residing in the intestine of the monocled cobra, Naja kaouthia, in the central region of Thailand. This study integrates morphological characteristics, morphometric examination, scanning electron microscopy and molecular phylogenetic analysis (COI, 18S rRNA and ITS1 genes). The findings place the newly described species within the subgenus Ophidiocapillaria, elucidating its distinctive characteristics, including a frame-like proximal spicule shape, approximate lengths of 19 000 and 22 500 µm with approximate widths of 90 and 130 µm for males and females, 39‒45 stichocytes, elevated lips without protrusion, a dorsal bacillary band stripe with an irregular pattern of bacillary cells and evidence of intestinal infection. These features serve to differentiate it from other species within the same subgenus, notably Paracapillaria (Ophidiocapillaria) najae De, , a species coexisting P. siamensis sp. nov. in the monocled cobra from the same locality. This study addresses the co-infection of the novel species and P. najae within the same snake host, marking the second documented instance of a paracapillariid species in the monocled cobra within the family Elapidae. The genetic characterization supports the formal recognition of P. siamensis sp. nov. as a distinct species, thereby underscoring its taxonomic differentiation within the Capillariidae family. This research identifies and characterizes the new nematode species, contributing valuable insights into the taxonomy of this nematode.


Assuntos
Filogenia , Animais , Tailândia , Masculino , Feminino , Microscopia Eletrônica de Varredura/veterinária , RNA Ribossômico 18S/genética , RNA Ribossômico 18S/análise , Naja , Nematoides/classificação , Nematoides/ultraestrutura , Nematoides/genética , Nematoides/anatomia & histologia , Intestinos/parasitologia , DNA de Helmintos
19.
Acta Parasitol ; 69(2): 1097-1106, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38514604

RESUMO

PURPOSE: Soil-transmitted nematodes (STNs) are widespread in tropical and subtropical regions, particularly where the communities are socio-economically challenged. We investigated the effect of soil temperature on the prevalence and intensity of STN infection in free-roaming dogs. METHODS: Fresh faecal samples collected from free-roaming dogs in Digana and Pussellawa town areas in the Kandy District, Sri Lanka, were microscopically analysed for canine STNs. Soil temperature was measured at each sampling site. Highly prevalent canine hookworm Ancylostoma, was further studied using PCR and sequencing, followed by phylogenetic analysis. RESULTS: The soil temperature ranged between 28 and 31 °C (mean = 29.79 °C) and 18-21 °C (mean = 19.52 °C) in Digana and Pussellawa, respectively, showing a significant difference in the two sites (Students t-test t = 1.68, p < 0.0001). Of the total 44 dogs sampled, 41 (93.2%) were positive for STNs. During microscopic analysis, five nematodes: Ancylostoma spp., Capillaria sp., Strongyloides sp., Toxocara canis, and Trichuris sp., were identified. Ancylostoma species (93.2%) were the most prevalent, followed by Strongyloides sp. (22.7%) and Toxocara canis (15.9%). Infection prevalence of Strongyloides sp. was higher in Digana (40.9%) compared to that in Pussellawa (4.5%; Chi-square test, χ2 = 8.28, p = 0.004) and also the infection intensity from Digana (EPG = 8.02 ± 20.2) compared to that from Pussellawa (0.45 ± 2.1; Mann Whitney U test, p = 0.006). Amplicons (ITS1-5.8S-ITS2) of the expected size for A. caninum, and A. tubaeforme were produced. An A. caninum sequence reported here (OQ101719) illustrated the highest similarity of 99.2% to one of the local sequences (MZ707153) upon pairwise comparison. CONCLUSION: Digana, with a higher soil temperature than Pussellawa, had a significantly higher prevalence and infection intensity, particularly Strongyloides sp. This study also signifies the first molecular identification of hookworm species A. tubaeforme in Sri Lanka.


Assuntos
Ancylostoma , Doenças do Cão , Fezes , Solo , Temperatura , Animais , Cães , Solo/parasitologia , Sri Lanka/epidemiologia , Doenças do Cão/parasitologia , Doenças do Cão/epidemiologia , Fezes/parasitologia , Ancylostoma/isolamento & purificação , Ancylostoma/genética , Ancylostoma/classificação , Filogenia , Prevalência , Ancilostomíase/veterinária , Ancilostomíase/epidemiologia , Ancilostomíase/parasitologia , Nematoides/classificação , Nematoides/isolamento & purificação , Nematoides/genética
20.
Braz. j. biol ; 83: 1-5, 2023. ilus
Artigo em Inglês | LILACS, VETINDEX | ID: biblio-1468835

RESUMO

A new species of nematode parasite of the subfamily Pudicinae (Heligmosomoidea: Heligmonellidae) is described from the small intestine of Proechimys simonsi (Rodentia: Echimyidae) from the locality of Nova Cintra in the municpality of Rodrigues Alves, Acre state, Brazil. The genus Pudica includes 15 species parasites of Neotropical rodents of the families Caviidae, Ctenomyidae, Dasyproctidae, Echimyidae, Erethizontidae, and Myocastoridae. Four species of this nematode were found parasitizing three different species rodents of the genus Proechimys in the Amazon biome. Pudica wandiquei n. sp. can be differentiated from all other Pudica species by the distance between the ends of rays 6 and 8 and the 1-3-1 pattern of the caudal bursa in both lobes.


Uma nova espécie de nematódeo da subfamília Pudicinae (Heligmosomoidea: Heligmonellidae) é descrito parasitando o intestino delgado de Proechimys simonsi (Rodentia: Echimyidae) em Nova Cintra, município de Rodrigues Alves, Estado do Acre, Brasil. O gênero Pudica inclui 15 espécies parasitas de roedores Neotropicais das famílias: Caviidae, Ctenomyidae, Dasyproctidae, Echimyidae, Erethizontidae e Myocastoridae. Destas, quatro espécies de nematódeos foram encontradas parasitando três diferentes espécies do roedor Proechimys no bioma Amazônia. Pudica wandiquei n. sp. é diferente das outras espécies de Pudica pela distância entre os raios 6 e 8 e pelo tipo da bolsa caudal, que é 1-3-1 em ambos os lados.


Assuntos
Animais , Infecções por Nematoides/diagnóstico , Infecções por Nematoides/veterinária , Nematoides/anatomia & histologia , Nematoides/classificação , Roedores/parasitologia
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