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1.
Parasitol Int ; 87: 102519, 2022 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-34800724

RESUMO

Information about Plasmodium malariae is scanty worldwide due to its "benign" nature and low infection rates. Consequently, studies on the genetic polymorphisms of P. malariae are lacking. Here, we report genetic polymorphisms of 28 P. malariae circumsporozoite protein (Pmcsp) isolates from Malaysia which were compared with those in other regions in Asia as well as those from Africa. Phylogenetic analysis revealed that most Malaysian P. malariae isolates clustered together but independently from other Asian isolates. Low nucleotide diversity was observed in Pmcsp non-repeat regions in contrast to high nucleotide diversity observed in non-repeat regions of Plasmodium knowlesi CSP gene, the current major cause of malaria in Malaysia. This study contributes to the characterisation of naturally occurring polymorphisms in the P. malariae CSP gene.


Assuntos
Malária/parasitologia , Filogenia , Plasmodium malariae/genética , Polimorfismo Genético , Proteínas de Protozoários/genética , Sequência de Aminoácidos/genética , Malária/epidemiologia , Malásia/epidemiologia , Nucleotídeos , Plasmodium knowlesi/genética , Plasmodium malariae/química , Plasmodium malariae/classificação , Proteínas de Protozoários/química
2.
Parasitol Int ; 76: 102069, 2020 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-32032726

RESUMO

Plasmodium malariae mainly causes asymptomatic submicroscopic parasitemia in the endemic Amazon and non-endemic Atlantic Forest, where the number of cases and transmission of malaria through blood transfusion has increased. This study developed a P. malariae/P. brasilianum Real Time PCR (rtPCR) targeting the cytochrome b oxidase (cytb), a highly repetitive gene (20-150 copies/parasite) that should detect more cases than the 18S rRNA (4-8 copies/parasite) gene-based amplification systems. Cytb from human and non-human Plasmodium species (including P. brasilianum) aligned to the only 20 African P. malariae cytb sequences identified polymorphic regions within which we designed P. malariae species-specific primers. Non-human Plasmodium species, related parasites, anemia-causing microorganisms, normal human DNA and 47 blood bank donors samples that were truly negative to malaria accessed rtPCR specificity. Truly positive samples (n = 101) with species identification by semi-nested, nested or TaqMan PCR, and four samples from the Atlantic Forest that were suspected of malaria but three of them had negative genus TaqMan and 18S rRNA nested PCR. The cloned amplification product used in standard curves determined qPCR detection limit (0.5-1 parasite equivalent/µL). The 10 positive P. malariae samples among truly positives yielded positive rtPCR results and more importantly, rtPCR detected the four samples suspected of malaria from the Atlantic Forest. The rtPCR specificity was 100%, reproducibility 11.1% and repeatability 6.7%. In conclusion, the proposed rtPCR is fast, apparently more sensitive than all 18S rRNA amplification systems for detecting extremely low parasitemia. The rtPCR is also specific to P. malariae/P. brasilianum species. This new molecular tool could be applied to the detection of P. malariae/brasilianum infections with submicroscopic parasitemias in the context of epidemiological studies and blood bank safety programs.


Assuntos
Citocromos b/análise , Plasmodium/genética , Proteínas de Protozoários/análise , Reação em Cadeia da Polimerase em Tempo Real/veterinária , Benzotiazóis , Diaminas , Proteínas Mitocondriais/análise , Compostos Orgânicos/química , Plasmodium/classificação , Plasmodium malariae/classificação , Plasmodium malariae/genética , Quinolinas , Reação em Cadeia da Polimerase em Tempo Real/métodos , Reprodutibilidade dos Testes , Especificidade da Espécie
3.
Malar J ; 19(1): 48, 2020 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-31992308

RESUMO

BACKGROUND: Molecular genotyping in Plasmodium serves many aims including providing tools for studying parasite population genetics and distinguishing recrudescence from reinfection. Microsatellite typing, insertion-deletion (INDEL) and single nucleotide polymorphisms is used for genotyping, but only limited information is available for Plasmodium malariae, an important human malaria species. This study aimed to provide a set of genetic markers to facilitate the study of P. malariae population genetics. METHODS: Markers for microsatellite genotyping and pmmsp1 gene polymorphisms were developed and validated in symptomatic P. malariae field isolates from Myanmar (N = 37). Fragment analysis was used to determine allele sizes at each locus to calculate multiplicity of infections (MOI), linkage disequilibrium, heterozygosity and construct dendrograms. Nucleotide diversity (π), number of haplotypes, and genetic diversity (Hd) were assessed and a phylogenetic tree was constructed. Genome-wide microsatellite maps with annotated regions of newly identified markers were constructed. RESULTS: Six microsatellite markers were developed and tested in 37 P. malariae isolates which showed sufficient heterozygosity (0.530-0.922), and absence of linkage disequilibrium (IAS=0.03, p value > 0.05) (N = 37). In addition, a tandem repeat (VNTR)-based pmmsp1 INDEL polymorphisms marker was developed and assessed in 27 P. malariae isolates showing a nucleotide diversity of 0.0976, haplotype gene diversity of 0.698 and identified 14 unique variants. The size of VNTR consensus repeat unit adopted as allele was 27 base pairs. The markers Pm12_426 and pmmsp1 showed greatest diversity with heterozygosity scores of 0.920 and 0.835, respectively. Using six microsatellites markers, the likelihood that any two parasite strains would have the same microsatellite genotypes was 8.46 × 10-4 and was further reduced to 1.66 × 10-4 when pmmsp1 polymorphisms were included. CONCLUSIONS: Six novel microsatellites genotyping markers and a set of pmmsp1 VNTR-based INDEL polymorphisms markers for P. malariae were developed and validated. Each marker could be independently or in combination employed to access genotyping of the parasite. The newly developed markers may serve as a useful tool for investigating parasite diversity, population genetics, molecular epidemiology and for distinguishing recrudescence from reinfection in drug efficacy studies.


Assuntos
Marcadores Genéticos , Repetições de Microssatélites , Plasmodium malariae/isolamento & purificação , Polimorfismo Genético , Frequência do Gene , Variação Genética , Técnicas de Genotipagem , Desequilíbrio de Ligação , Proteína 1 de Superfície de Merozoito/genética , Plasmodium malariae/classificação , Plasmodium malariae/genética , Reação em Cadeia da Polimerase , Reprodutibilidade dos Testes
4.
Malar J ; 17(1): 24, 2018 01 11.
Artigo em Inglês | MEDLINE | ID: mdl-29325573

RESUMO

BACKGROUND: Genetic diversity of the three important antigenic proteins, namely thrombospondin-related anonymous protein (TRAP), apical membrane antigen 1 (AMA1), and 6-cysteine protein (P48/45), all of which are found in various developmental stages of Plasmodium parasites is crucial for targeted vaccine development. While studies related to the genetic diversity of these proteins are available for Plasmodium falciparum and Plasmodium vivax, barely enough information exists regarding Plasmodium malariae. The present study aims to demonstrate the genetic variations existing among these three genes in P. malariae by analysing their diversity at nucleotide and protein levels. METHODS: Three surface protein genes were isolated from 45 samples collected in Thailand (N = 33), Myanmar (N = 8), and Lao PDR (N = 4), using conventional polymerase chain reaction (PCR) assay. Then, the PCR products were sequenced and analysed using BioEdit, MEGA6, and DnaSP programs. RESULTS: The average pairwise nucleotide diversities (π) of P. malariae trap, ama1, and p48/45 were 0.00169, 0.00413, and 0.00029, respectively. The haplotype diversities (Hd) of P. malariae trap, ama1, and p48/45 were 0.919, 0.946, and 0.130, respectively. Most of the nucleotide substitutions were non-synonymous, which indicated that the genetic variations of these genes were maintained by positive diversifying selection, thus, suggesting their role as a potential target of protective immune response. Amino acid substitutions of P. malariae TRAP, AMA1, and P48/45 could be categorized to 17, 20, and 2 unique amino-acid variants, respectively. For further vaccine development, carboxyl terminal of P48/45 would be a good candidate according to conserved amino acid at low genetic diversity (π = 0.2-0.3). CONCLUSIONS: High mutational diversity was observed in P. malariae trap and ama1 as compared to p48/45 in P. malariae samples isolated from Thailand, Myanmar, and Lao PDR. Taken together, these results suggest that P48/45 might be a good vaccine candidate against P. malariae infection because of its sufficiently low genetic diversity and highly conserved amino acids especially on the carboxyl end.


Assuntos
Variação Genética , Malária/parasitologia , Proteínas de Membrana/genética , Plasmodium malariae/classificação , Plasmodium malariae/genética , Proteínas de Protozoários/genética , Substituição de Aminoácidos , Haplótipos , Humanos , Laos , Mianmar , Plasmodium malariae/isolamento & purificação , Reação em Cadeia da Polimerase , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Homologia de Sequência do Ácido Nucleico , Tailândia
5.
PLoS One ; 12(1): e0170704, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28125696

RESUMO

One hundred and fifty-two blood samples of non-human primates of thirteen rescue centers in Costa Rica were analyzed to determine the presence of species of Plasmodium using thick blood smears, semi-nested multiplex polymerase chain reaction (SnM-PCR) for species differentiation, cloning and sequencing for confirmation. Using thick blood smears, two samples were determined to contain the Plasmodium malariae parasite, with SnM-PCR, a total of five (3.3%) samples were positive to P. malariae, cloning and sequencing confirmed both smear samples as P. malariae. One sample amplified a larger and conserved region of 18S rDNA for the genus Plasmodium and sequencing confirmed the results obtained microscopically and through SnM-PCR tests. Sequencing and construction of a phylogenetic tree of this sample revealed that the P. malariae/P. brasilianum parasite (GenBank KU999995) found in a howler monkey (Alouatta palliata) is identical to that recently reported in humans in Costa Rica. The SnM-PCR detected P. malariae/P. brasilianum parasite in different non-human primate species in captivity and in various regions of the southern Atlantic and Pacific coast of Costa Rica. The similarity of the sequences of parasites found in humans and a monkey suggests that monkeys may be acting as reservoirs of P.malariae/P. brasilianum, for which reason it is important, to include them in control and eradication programs.


Assuntos
DNA de Protozoário/genética , Haplorrinos/parasitologia , Malária/veterinária , Doenças dos Macacos/epidemiologia , Plasmodium malariae/isolamento & purificação , Plasmodium/isolamento & purificação , Animais , Costa Rica/epidemiologia , Reservatórios de Doenças/parasitologia , Monitoramento Epidemiológico , Feminino , Humanos , Malária/diagnóstico , Malária/epidemiologia , Malária/parasitologia , Masculino , Doenças dos Macacos/diagnóstico , Doenças dos Macacos/parasitologia , Filogenia , Plasmodium/classificação , Plasmodium/genética , Plasmodium malariae/classificação , Plasmodium malariae/genética , RNA Ribossômico 18S/genética
6.
Malar J ; 16(1): 9, 2017 01 03.
Artigo em Inglês | MEDLINE | ID: mdl-28049489

RESUMO

BACKGROUND: Expanded malaria control efforts in Sénégal have resulted in increased use of rapid diagnostic tests (RDT) to identify the primary disease-causing Plasmodium species, Plasmodium falciparum. However, the type of RDT utilized in Sénégal does not detect other malaria-causing species such as Plasmodium ovale spp., Plasmodium malariae, or Plasmodium vivax. Consequently, there is a lack of information about the frequency and types of malaria infections occurring in Sénégal. This study set out to better determine whether species other than P. falciparum were evident among patients evaluated for possible malaria infection in Kédougou, Sénégal. METHODS: Real-time polymerase chain reaction speciation assays for P. vivax, P. ovale spp., and P. malariae were developed and validated by sequencing and DNA extracted from 475 Plasmodium falciparum-specific HRP2-based RDT collected between 2013 and 2014 from a facility-based sample of symptomatic patients from two health clinics in Kédougou, a hyper-endemic region in southeastern Sénégal, were analysed. RESULTS: Plasmodium malariae (n = 3) and P. ovale wallikeri (n = 2) were observed as co-infections with P. falciparum among patients with positive RDT results (n = 187), including one patient positive for all three species. Among 288 negative RDT samples, samples positive for P. falciparum (n = 24), P. ovale curtisi (n = 3), P. ovale wallikeri (n = 1), and P. malariae (n = 3) were identified, corresponding to a non-falciparum positivity rate of 2.5%. CONCLUSIONS: These findings emphasize the limitations of the RDT used for malaria diagnosis and demonstrate that non-P. falciparum malaria infections occur in Sénégal. Current RDT used for routine clinical diagnosis do not necessarily provide an accurate reflection of malaria transmission in Kédougou, Sénégal, and more sensitive and specific methods are required for diagnosis and patient care, as well as surveillance and elimination activities. These findings have implications for other malaria endemic settings where species besides P. falciparum may be transmitted and overlooked by control or elimination activities.


Assuntos
Malária/epidemiologia , Plasmodium malariae/isolamento & purificação , Plasmodium ovale/isolamento & purificação , Plasmodium vivax/isolamento & purificação , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Criança , Pré-Escolar , Testes Diagnósticos de Rotina/métodos , Feminino , Humanos , Lactente , Masculino , Pessoa de Meia-Idade , Plasmodium malariae/classificação , Plasmodium malariae/genética , Plasmodium ovale/classificação , Plasmodium ovale/genética , Plasmodium vivax/classificação , Plasmodium vivax/genética , Prevalência , Reação em Cadeia da Polimerase em Tempo Real , Senegal/epidemiologia , Sensibilidade e Especificidade , Adulto Jovem
7.
Malar J ; 15(1): 557, 2016 11 15.
Artigo em Inglês | MEDLINE | ID: mdl-27846879

RESUMO

BACKGROUND: The Greater Mekong Subregion is aiming to achieve regional malaria elimination by 2030. Though a shift in malaria parasite species predominance by Plasmodium vivax has been recently documented, the transmission of the two minor Plasmodium species, Plasmodium malariae and Plasmodium ovale spp., is poorly characterized in the region. This study aims to determine the prevalence of these minor species in the China-Myanmar border area and their genetic diversity. METHODS: Epidemiology study was conducted during passive case detection in hospitals and clinics in Myanmar and four counties in China along the China-Myanmar border. Cross-sectional surveys were conducted in villages and camps for internally displaced persons to determine the prevalence of malaria infections. Malaria infections were diagnosed initially by microscopy and later in the laboratory using nested PCR for the SSU rRNA genes. Plasmodium malariae and P. ovale infections were confirmed by sequencing the PCR products. The P. ovale subtypes were determined by sequencing the Pocytb, Pocox1 and Pog3p genes. Parasite populations were evaluated by PCR amplification and sequencing of the MSP-1 genes. Antifolate sensitivity was assessed by sequencing the dhfr-ts and dhps genes from the P. malariae and P. ovale isolates. RESULTS: Analysis of 2701 blood samples collected from the China-Myanmar border by nested PCR targeting the parasite SSU rRNA genes identified 561 malaria cases, including 161 Plasmodium falciparum, 327 P. vivax, 66 P. falciparum/P. vivax mixed infections, 4 P. malariae and 3 P. ovale spp. P. vivax and P. falciparum accounted for >60 and ~30% of all malaria cases, respectively. In comparison, the prevalence of P. malariae and P. ovale spp. was very low and only made up ~1% of all PCR-positive cases. Nevertheless, these two species were often misidentified as P. vivax infections or completely missed by microscopy even among symptomatic patients. Phylogenetic analysis of the SSU rRNA, Pocytb, Pocox1 and Pog3p genes confirmed that the three P. ovale spp. isolates belonged to the subtype P. ovale curtisi. Low-level genetic diversity was detected in the MSP-1, dhfr and dhps genes of these minor parasite species, potentially stemming from the low prevalence of these parasites preventing their mixing. Whereas most of the dhfr and dhps positions equivalent to those conferring antifolate resistance in P. falciparum and P. vivax were wild type, a new mutation S113C corresponding to the S108 position in pfdhfr was identified in two P. ovale curtisi isolates. CONCLUSIONS: The four human malaria parasite species all occurred sympatrically at the China-Myanmar border. While P. vivax has become the predominant species, the two minor parasite species also occurred at very low prevalence but were often misidentified or missed by conventional microscopy. These minor parasite species displayed low levels of polymorphisms in the msp-1, dhfr and dhps genes.


Assuntos
Variação Genética , Malária/epidemiologia , Malária/parasitologia , Plasmodium malariae/classificação , Plasmodium malariae/isolamento & purificação , Plasmodium ovale/classificação , Plasmodium ovale/isolamento & purificação , Adulto , Criança , China/epidemiologia , Análise por Conglomerados , Estudos Transversais , DNA de Protozoário/química , DNA de Protozoário/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Resistência a Medicamentos , Feminino , Humanos , Masculino , Microscopia , Mianmar/epidemiologia , Filogenia , Plasmodium falciparum/classificação , Plasmodium falciparum/genética , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/genética , Plasmodium ovale/genética , Plasmodium vivax/classificação , Plasmodium vivax/genética , Plasmodium vivax/isolamento & purificação , Reação em Cadeia da Polimerase , Prevalência , Proteínas de Protozoários/genética , RNA Ribossômico 18S/genética , Análise de Sequência de DNA , Adulto Jovem
8.
Int J Parasitol ; 46(11): 685-96, 2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-27392654

RESUMO

Malaria in humans is caused by six species of Plasmodium parasites, of which the nuclear genome sequences for the two Plasmodium ovale spp., P. ovale curtisi and P. ovale wallikeri, and Plasmodium malariae have not yet been analyzed. Here we present an analysis of the nuclear genome sequences of these three parasites, and describe gene family expansions therein. Plasmodium ovale curtisi and P. ovale wallikeri are genetically distinct but morphologically indistinguishable and have sympatric ranges through the tropics of Africa, Asia and Oceania. Both P. ovale spp. show expansion of the surfin variant gene family, and an amplification of the Plasmodium interspersed repeat (pir) superfamily which results in an approximately 30% increase in genome size. For comparison, we have also analyzed the draft nuclear genome of P. malariae, a malaria parasite causing mild malaria symptoms with a quartan life cycle, long-term chronic infections, and wide geographic distribution. Plasmodium malariae shows only a moderate level of expansion of pir genes, and unique expansions of a highly diverged transmembrane protein family with over 550 members and the gamete P25/27 gene family. The observed diversity in the P. ovale wallikeri and P. ovale curtisi surface antigens, combined with their phylogenetic separation, supports consideration that the two parasites be given species status.


Assuntos
Genoma de Protozoário , Família Multigênica , Plasmodium malariae/genética , Plasmodium ovale/genética , Adulto , África Ocidental , Animais , Antígenos de Protozoários/genética , Antígenos de Superfície/genética , China , Homólogo 5 da Proteína Cromobox , Variação Genética , Humanos , Sequências Repetitivas Dispersas/genética , Masculino , Proteínas de Membrana/genética , Família Multigênica/genética , Filogenia , Plasmodium falciparum/classificação , Plasmodium falciparum/genética , Plasmodium knowlesi/classificação , Plasmodium knowlesi/genética , Plasmodium malariae/classificação , Plasmodium ovale/classificação , Plasmodium vivax/classificação , Plasmodium vivax/genética , Adulto Jovem
9.
Diagn Microbiol Infect Dis ; 85(1): 16-8, 2016 May.
Artigo em Inglês | MEDLINE | ID: mdl-26915637

RESUMO

Malaria surveillance is critical for control efforts, but diagnostic methods frequently disagree. Here, we compare microscopy, PCR, and a rapid diagnostic test in 7137 samples from children in the Democratic Republic of the Congo using latent class analysis. PCR had the highest sensitivity (94.6%) and microscopy had the lowest (76.7%).


Assuntos
Malária/diagnóstico , Malária/parasitologia , Plasmodium malariae/classificação , República Democrática do Congo/epidemiologia , Testes Diagnósticos de Rotina/métodos , Testes Diagnósticos de Rotina/normas , Humanos , Malária/epidemiologia , Microscopia , Plasmodium malariae/citologia , Plasmodium malariae/genética , Reação em Cadeia da Polimerase , Vigilância em Saúde Pública , Sensibilidade e Especificidade
10.
Folia Parasitol (Praha) ; 60(5): 401-5, 2013 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-24471280

RESUMO

The present study evaluates the performance of OptiMAL-IT test and nested PCR assay in detection of malaria parasites. A total of 76 randomly selected blood samples collected from two malaria endemic areas were tested for malaria parasites using microscopy and OptiMAL-IT test in the field. PCR assays were performed in the laboratory using DNA extracted from blood spots of the same samples collected on the FTA classic cards. Of the total of 61 field confirmed malaria positive samples, only 58 (95%) were detected positive using microscopy in the laboratory. Sensitivity, specificity, positive predictive value, negative predictive value and false discovery rate of OptiMal-IT in comparison to the microscopy were 93%, 83%, 95%, 79% and 5%, respectively. On the other hand, the sensitivity and specificity of PCR assay were 97% and 100%, respectively, whereas positive predictive value, negative predictive value and false discovery rate were 100%, 90% and 0%, respectively. The overall performance of OptiMal-IT and PCR assays for malaria diagnosis was 76% and 97%, respectively. PCR assay enabled the identification of infection with Plasmodium malariae Laveran, 1881 in four samples misidentified by microscopy and Plasmodium-specific antigen (PAN) identified by the OptiMAL-IT test. In addition to the standard methods, such PCR assay could be useful to obtain the real incidence of each malaria parasite species for epidemiological perspectives.


Assuntos
Doenças Endêmicas , Malária/parasitologia , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Humanos , Índia/epidemiologia , Malária/epidemiologia , Plasmodium falciparum/classificação , Plasmodium malariae/classificação , Sensibilidade e Especificidade
11.
Acta Trop ; 118(2): 118-22, 2011 May.
Artigo em Inglês | MEDLINE | ID: mdl-21420375

RESUMO

The identification of Plasmodium species in Anopheles mosquitoes is an integral component of malaria control programs. We developed a new assay to identify Plasmodium falciparum, Plasmodium malariae, and Plasmodium vivax variants. Specific primers were designed to hybridize to CS gene-specific regions. Polymerase chain reaction (PCR) and restriction fragment length polymorphism (RFLP) were used to distinguish the P. vivax variants VK210, VK247, and P. vivax-like. The new PCR-RFLP assay revealed good agreement when compared with a nested PCR using artificially infected Anopheles mosquitoes. This sensitive PCR-RFLP method can be useful when detection of Plasmodium species and P. vivax variants is required and may be employed to improve the understanding of malaria transmission dynamics by Anopheles species.


Assuntos
Anopheles/parasitologia , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/isolamento & purificação , Plasmodium vivax/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Polimorfismo de Fragmento de Restrição , Animais , Primers do DNA/genética , Plasmodium falciparum/classificação , Plasmodium falciparum/genética , Plasmodium malariae/classificação , Plasmodium malariae/genética , Plasmodium vivax/classificação , Plasmodium vivax/genética , Proteínas de Protozoários/genética , Sensibilidade e Especificidade
12.
Malar J ; 10: 38, 2011 Feb 11.
Artigo em Inglês | MEDLINE | ID: mdl-21314950

RESUMO

BACKGROUND: Described here is the first population genetic study of Plasmodium malariae, the causative agent of quartan malaria. Although not as deadly as Plasmodium falciparum, P. malariae is more common than previously thought, and is frequently in sympatry and co-infection with P. falciparum, making its study increasingly important. This study compares the population parameters of the two species in two districts of Malawi with different malaria transmission patterns--one seasonal, one perennial--to explore the effects of transmission on population structures. METHODS: Six species-specific microsatellite markers were used to analyse 257 P. malariae samples and 257 P. falciparum samples matched for age, gender and village of residence. Allele sizes were scored to within 2 bp for each locus and haplotypes were constructed from dominant alleles in multiple infections. Analysis of multiplicity of infection (MOI), population differentiation, clustering of haplotypes and linkage disequilibrium was performed for both species. Regression analyses were used to determine association of MOI measurements with clinical malaria parameters. RESULTS: Multiple-genotype infections within each species were common in both districts, accounting for 86.0% of P. falciparum and 73.2% of P. malariae infections and did not differ significantly with transmission setting. Mean MOI of P. falciparum was increased under perennial transmission compared with seasonal (3.14 vs 2.59, p = 0.008) and was greater in children compared with adults. In contrast, P. malariae mean MOI was similar between transmission settings (2.12 vs 2.11) and there was no difference between children and adults. Population differentiation showed no significant differences between villages or districts for either species. There was no evidence of geographical clustering of haplotypes. Linkage disequilibrium amongst loci was found only for P. falciparum samples from the seasonal transmission setting. CONCLUSIONS: The extent of similarity between P. falciparum and P. malariae population structure described by the high level of multiple infection, the lack of significant population differentiation or haplotype clustering and lack of linkage disequilibrium is surprising given the differences in the biological features of these species that suggest a reduced potential for out-crossing and transmission in P. malariae. The absence of a rise in P. malariae MOI with increased transmission or a reduction in MOI with age could be explained by differences in the duration of infection or degree of immunity compared to P. falciparum.


Assuntos
Malária/parasitologia , Plasmodium falciparum/classificação , Plasmodium falciparum/genética , Plasmodium malariae/classificação , Plasmodium malariae/genética , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Criança , Pré-Escolar , Análise por Conglomerados , Impressões Digitais de DNA , DNA de Protozoário/genética , Feminino , Genótipo , Haplótipos , Humanos , Lactente , Desequilíbrio de Ligação , Malaui , Masculino , Repetições de Microssatélites , Pessoa de Meia-Idade , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/isolamento & purificação , Adulto Jovem
13.
Clin Microbiol Infect ; 17(3): 469-75, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-20298268

RESUMO

Malaria is generally diagnosed by microscopy and rapid antigen testing. Molecular methods become more widely used. In the present study, the contribution of a quantitative multiplex malaria PCR was investigated. We assessed: (i) the agreement between PCR-based identification and microscopy and (ii) the correlation between the parasite load as determined by quantitative PCR and by microscopy. For 83 patients positive by microscopy for Plasmodium spp., the first EDTA-blood sample was tested by multiplex PCR to confirm smear-based species identification. Parasite load was assessed daily using both microscopy and PCR. Among the 83 patients tested, one was positive by microscopy only and 82 were positive by microscopy and PCR. Agreement between microscopy and PCR for the identification at the species level was 89% (73/82). Six of the nine discordant results corresponded to co-infections by two or three species and were attributed to inaccurate morphological identification of mixed cases. The parasite load generally decreased rapidly after treatment had been started, with similar decay curves being obtained using both microscopy and PCR. Our PCR proved especially useful for identifying mixed infections. The quantification obtained by PCR closely correlated with microscopy-based quantification and could be useful for monitoring treatment efficacy, at least in clinical trials.


Assuntos
Malária/diagnóstico , Plasmodium falciparum/genética , Plasmodium malariae/genética , Plasmodium ovale/genética , Plasmodium vivax/genética , Adolescente , Humanos , Malária/parasitologia , Microscopia , Tipagem Molecular/métodos , Plasmodium falciparum/classificação , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/classificação , Plasmodium malariae/isolamento & purificação , Plasmodium ovale/classificação , Plasmodium ovale/isolamento & purificação , Plasmodium vivax/classificação , Plasmodium vivax/isolamento & purificação , Reação em Cadeia da Polimerase , RNA Ribossômico 18S/genética
15.
Clin Microbiol Infect ; 16(8): 1305-11, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19840032

RESUMO

In cases of malaria, rapid and accurate diagnosis of Plasmodium sp. is essential. In this study three different quantitative, real-time PCR methods were compared with routine methods used for malaria diagnosis. A comparative study was conducted prospectively in the laboratories of Montpellier and Nîmes University Hospitals. The methods used for routine diagnostic malaria testing consisted of microscopic examination of Giemsa-stained blood smears and rapid diagnostic tests. Three quantitative real-time PCR methods (qRT-PCR) were tested: qRT-PCR1 amplified a specific sequence on the P. falciparum Cox1 gene, qRT-PCR2 amplified a species-specific region of the multicopy 18S rDNA, and qRT-PCR3 amplified a mitochondrial DNA sequence. Among the 196 blood samples collected, 73 samples were positive in at least one of the five tests. Compared with the routine method, there were no false negatives for P. falciparum diagnosis in either qRT-PCR1 or qRT-PCR3. In all P. ovale, P. vivax and P. malariae infections diagnosed from blood smears, qRT-PCR1 was negative, as expected, whereas qRT-PCR2 and qRT-PCR3 were positive and concordant (simple kappa coefficient = 1). One negative sample from microscopy was positive with both qRT-PCR2 and qRT-PCR3. Together, qRT-PCR3 and the combined qRT-PCR1 and qRT-PCR2 were concordant with routine methods for malaria diagnosis (99% and 99.5%, respectively). These three rapid, molecular qRT-PCR methods, used alone or in association, showed excellent results, with high concordance, accuracy and reliability in malaria diagnosis.


Assuntos
Malária/diagnóstico , Parasitologia/métodos , Plasmodium malariae/isolamento & purificação , Plasmodium ovale/isolamento & purificação , Plasmodium vivax/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , Sangue/parasitologia , DNA Mitocondrial/genética , DNA Ribossômico/genética , Erros de Diagnóstico , Testes Diagnósticos de Rotina , Complexo IV da Cadeia de Transporte de Elétrons/genética , França , Humanos , Plasmodium malariae/classificação , Plasmodium ovale/classificação , Plasmodium vivax/classificação , Estudos Prospectivos , Sensibilidade e Especificidade
16.
J Parasitol ; 96(2): 329-39, 2010 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-19891516

RESUMO

Splenectomized Aotus lemurinus griseimembra, A. azarae boliviensis, A. nancymaae, A. vociferans, and Saimiri boliviensis monkeys were infected with the Uganda I/CDC strain of Plasmodium malariae. The maximum parasite counts were lower if the animals had been previously infected with Plasmodium vivax. Mosquito infection was concentrated in the 12 days following the rise in count above 1,000/microl. Mosquito infection and parasite counts were highest with A. l. griseimembra. Anopheles freeborni was more readily infected than An. gambiae, which was more readily infected than An. stephensi. Parasite counts and mosquito infection with P. brasilianum were much higher in S. boliviensis monkeys than with the Uganda I strain of P. malariae in this host, suggesting marked differences between the host-parasite-vector relationships and indicating that P. brasilianum in S. boliviensis monkeys may be a better reflection of the relationship of P. malariae in the human host.


Assuntos
Anopheles/parasitologia , Aotidae/parasitologia , Insetos Vetores/parasitologia , Plasmodium/fisiologia , Saimiri/parasitologia , Animais , Aotidae/imunologia , Modelos Animais de Doenças , Eritrócitos/parasitologia , Interações Hospedeiro-Parasita , Malária/imunologia , Malária/parasitologia , Parasitemia/imunologia , Parasitemia/parasitologia , Plasmodium/classificação , Plasmodium/imunologia , Plasmodium malariae/classificação , Plasmodium malariae/imunologia , Plasmodium malariae/fisiologia , Análise de Regressão , Saimiri/imunologia , Esplenectomia
17.
Malar J ; 8: 86, 2009 Apr 29.
Artigo em Inglês | MEDLINE | ID: mdl-19402894

RESUMO

BACKGROUND: Several strategies are currently deployed in many countries in the tropics to strengthen malaria control toward malaria elimination. To measure the impact of any intervention, there is a need to detect malaria properly. Mostly, decisions still rely on microscopy diagnosis. But sensitive diagnosis tools enabling to deal with a large number of samples are needed. The molecular detection approach offers a much higher sensitivity, and the flexibility to be automated and upgraded. METHODS: Two new molecular methods were developed: dot18S, a Plasmodium-specific nested PCR based on the 18S rRNA gene followed by dot-blot detection of species by using species-specific probes and CYTB, a Plasmodium-specific nested PCR based on cytochrome b gene followed by species detection using SNP analysis. The results were compared to those obtained with microscopic examination and the "standard" 18S rRNA gene based nested PCR using species specific primers. 337 samples were diagnosed. RESULTS: Compared to the microscopy the three molecular methods were more sensitive, greatly increasing the estimated prevalence of Plasmodium infection, including P. malariae and P. ovale. A high rate of mixed infections was uncovered with about one third of the villagers infected with more than one malaria parasite species. Dot18S and CYTB sensitivity outranged the "standard" nested PCR method, CYTB being the most sensitive. As a consequence, compared to the "standard" nested PCR method for the detection of Plasmodium spp., the sensitivity of dot18S and CYTB was respectively 95.3% and 97.3%. Consistent detection of Plasmodium spp. by the three molecular methods was obtained for 83% of tested isolates. Contradictory results were mostly related to detection of Plasmodium malariae and Plasmodium ovale in mixed infections, due to an "all-or-none" detection effect at low-level parasitaemia. CONCLUSION: A large reservoir of asymptomatic infections was uncovered using the molecular methods. Dot18S and CYTB, the new methods reported herein are highly sensitive, allow parasite DNA extraction as well as genus- and species-specific diagnosis of several hundreds of samples, and are amenable to high-throughput scaling up for larger sample sizes. Such methods provide novel information on malaria prevalence and epidemiology and are suited for active malaria detection. The usefulness of such sensitive malaria diagnosis tools, especially in low endemic areas where eradication plans are now on-going, is discussed in this paper.


Assuntos
DNA de Protozoário/sangue , Malária/diagnóstico , Plasmodium/classificação , Plasmodium/isolamento & purificação , Reação em Cadeia da Polimerase/métodos , RNA Ribossômico 18S/genética , Animais , Citocromos b/genética , Primers do DNA , Sondas de DNA , Humanos , Malária/parasitologia , Microscopia , Dados de Sequência Molecular , Plasmodium/genética , Plasmodium falciparum/classificação , Plasmodium falciparum/genética , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/classificação , Plasmodium malariae/genética , Plasmodium malariae/isolamento & purificação , Plasmodium ovale/classificação , Plasmodium ovale/genética , Plasmodium ovale/isolamento & purificação , Plasmodium vivax/classificação , Plasmodium vivax/genética , Plasmodium vivax/isolamento & purificação , Prevalência , Sensibilidade e Especificidade , Especificidade da Espécie
18.
Malar J ; 8: 12, 2009 Jan 12.
Artigo em Inglês | MEDLINE | ID: mdl-19138412

RESUMO

BACKGROUND: Malaria is one of the most important infectious diseases in the world. Although most cases are found distributed in the tropical regions of Africa, Asia, Central and South Americas, there is in Europe a significant increase in the number of imported cases in non-endemic countries, in particular due to the higher mobility in today's society. METHODS: The prevalence of a possible asymptomatic infection with Plasmodium species was assessed using Nucleic Acid Sequence Based Amplification (NASBA) assays on clinical samples collected from 195 study cases with no clinical signs related to malaria and coming from sub-Saharan African regions to Southern Italy. In addition, base-line demographic, clinical and socio-economic information was collected from study participants who also underwent a full clinical examination. RESULTS: Sixty-two study subjects (31.8%) were found positive for Plasmodium using a pan Plasmodium specific NASBA which can detect all four Plasmodium species causing human disease, based on the small subunit 18S rRNA gene (18S NASBA). Twenty-four samples (38%) of the 62 18S NASBA positive study cases were found positive with a Pfs25 mRNA NASBA, which is specific for the detection of gametocytes of Plasmodium falciparum. A statistically significant association was observed between 18S NASBA positivity and splenomegaly, hepatomegaly and leukopaenia and country of origin. CONCLUSION: This study showed that a substantial proportion of people originating from malaria endemic countries harbor malaria parasites in their blood. If transmission conditions are available, they could potentially be a reservoir. Therefore, health authorities should pay special attention to the health of this potential risk group and aim to improve their health conditions.


Assuntos
Malária/parasitologia , Plasmodium/isolamento & purificação , Proteínas de Protozoários/genética , RNA Ribossômico 18S/genética , Migrantes/estatística & dados numéricos , Adolescente , Adulto , África Subsaariana/etnologia , Animais , População Negra , Feminino , Humanos , Itália , Malária/etnologia , Malária/genética , Masculino , Parasitemia , Plasmodium/classificação , Plasmodium/genética , Plasmodium falciparum/classificação , Plasmodium falciparum/genética , Plasmodium falciparum/isolamento & purificação , Plasmodium malariae/classificação , Plasmodium malariae/genética , Plasmodium malariae/isolamento & purificação , Plasmodium ovale/classificação , Plasmodium ovale/genética , Plasmodium ovale/isolamento & purificação , Plasmodium vivax/classificação , Plasmodium vivax/genética , Plasmodium vivax/isolamento & purificação , Prevalência , Proteínas de Protozoários/metabolismo , RNA Mensageiro/análise , Replicação de Sequência Autossustentável/métodos , Sensibilidade e Especificidade , Adulto Jovem
19.
Trop Biomed ; 26(3): 326-33, 2009 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-20237447

RESUMO

Light microscopy, the mainstay of malaria diagnosis in epidemiologic studies, exhibits limited sensitivity for detecting low level infections and often under-estimates the frequency of mixed Plasmodium species infections. To overcome these shortcomings we performed the PCR method for detection and identification of Plasmodium species in blood specimens from 242 individuals collected during the peak season of malaria incidence (July-October). Malaria prevalence was 81.4% and 43.4% by PCR and microscopy respectively. Moreover, while PCR detected Plasmodium malariae DNA in 108 (44.6%), microscopic examination detected only 20 (8.3%) individuals parasitized with this species. Further data analysis revealed an independent random distribution pattern of parasites irrespective of age groups (0-5 yrs, chi-square7df=2.77, P>0.95; 6-15 yrs, chi-square7df=4.82, P>0.50; >15 yrs, chi-square7df=4.4, P>0.70) and sexes (for male chi-square7df=2.48, P>0.95; for female, chi-square7df=1.85, P>0.95). However, although the parasite distribution is random irrespective of sex, females had more P. malariae infections (P=0.004, OR=2.312, 95% CI=1.3-4.1). Our study demonstrates that the parasite distribution in Orissa is random with substantially higher prevalence of P.malariae than previously suspected and this may be seasonal. A study of the bionomics of vector(s) responsible for P. malariae transmission in Orissa is needed to provide information for the control of malaria in the state.


Assuntos
Malária/epidemiologia , Plasmodium malariae , Adolescente , Fatores Etários , Criança , Pré-Escolar , Estudos Transversais , DNA de Protozoário/sangue , Feminino , Humanos , Incidência , Índia , Lactente , Malária/diagnóstico , Malária/parasitologia , Masculino , Parasitemia/parasitologia , Plasmodium malariae/classificação , Plasmodium malariae/genética , Plasmodium malariae/isolamento & purificação , Reação em Cadeia da Polimerase , Prevalência , Fatores Sexuais , Especificidade da Espécie
20.
Trends Parasitol ; 23(6): 278-83, 2007 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-17459775

RESUMO

Although Plasmodium malariae was first described as an infectious disease of humans by Golgi in 1886 and Plasmodium ovale identified by Stevens in 1922, there are still large gaps in our knowledge of the importance of these infections as causes of malaria in different parts of the world. They have traditionally been thought of as mild illnesses that are caused by rare and, in case of P. ovale, short-lived parasites. However, recent advances in sensitive PCR diagnosis are causing a re-evaluation of this assumption. Low-level infection seems to be common across malaria-endemic areas, often as complex mixed infections. The potential interactions of P. malariae and P. ovale with Plasmodium falciparum and Plasmodium vivax might explain some basic questions of malaria epidemiology, and understanding these interactions could have an important influence on the deployment of interventions such as malaria vaccines.


Assuntos
Plasmodium malariae/isolamento & purificação , Plasmodium ovale/isolamento & purificação , Adolescente , Adulto , Animais , Criança , Pré-Escolar , Humanos , Lactente , Recém-Nascido , Malária/diagnóstico , Malária/epidemiologia , Malária/parasitologia , Microscopia/métodos , Plasmodium malariae/classificação , Plasmodium malariae/genética , Plasmodium ovale/classificação , Plasmodium ovale/genética , Reação em Cadeia da Polimerase/métodos , Prevalência
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