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Protein side-chain dynamics observed by solution- and solid-state NMR: comparative analysis of methyl 2H relaxation data.
Reif, Bernd; Xue, Yi; Agarwal, Vipin; Pavlova, Maria S; Hologne, Maggy; Diehl, Anne; Ryabov, Yaroslav E; Skrynnikov, Nikolai R.
Afiliación
  • Reif B; Forschunginstitut für Molekulare Pharmakologie, Robert-Rössle-Str. 10, 13125 Berlin, Germany.
J Am Chem Soc ; 128(38): 12354-5, 2006 Sep 27.
Article en En | MEDLINE | ID: mdl-16984151
Rapid advances in solid-state MAS NMR made it possible to probe protein dynamics on a per-residue basis, similar to solution experiments. In this work we compare methyl 2H relaxation rates measured in the solid and liquid samples of alpha-spectrin SH3 domain. The solution data are treated using a model-free approach to separate the contributions from the overall molecular tumbling and fast internal motion. The latter part forms the basis for comparison with the solid-state data. Although the accuracy of solid-state measurements is limited by deuterium spin diffusion, the results suggest a significant similarity between methyl dynamics in the two samples. This is a potentially important observation, preparing the ground for combined analysis of the dynamics data by solid- and solution-state NMR.
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Colección: 01-internacional Base de datos: MEDLINE Contexto en salud: 3_ND Problema de salud: 3_neglected_diseases / 3_zoonosis Asunto principal: Espectrina / Resonancia Magnética Nuclear Biomolecular Límite: Animals Idioma: En Revista: J Am Chem Soc Año: 2006 Tipo del documento: Article País de afiliación: Alemania
Buscar en Google
Colección: 01-internacional Base de datos: MEDLINE Contexto en salud: 3_ND Problema de salud: 3_neglected_diseases / 3_zoonosis Asunto principal: Espectrina / Resonancia Magnética Nuclear Biomolecular Límite: Animals Idioma: En Revista: J Am Chem Soc Año: 2006 Tipo del documento: Article País de afiliación: Alemania
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