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Characterization of Novel Erwinia amylovora Jumbo Bacteriophages from Eneladusvirus Genus.
Kim, Sang Guen; Lee, Sung Bin; Giri, Sib Sankar; Kim, Hyoun Joong; Kim, Sang Wha; Kwon, Jun; Park, Jungkum; Roh, Eunjung; Park, Se Chang.
Afiliación
  • Kim SG; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
  • Lee SB; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
  • Giri SS; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
  • Kim HJ; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
  • Kim SW; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
  • Kwon J; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
  • Park J; Crop Protection Division, National Institute of Agriculture Sciences, Rural Development Administration, Wanju 55365, Korea.
  • Roh E; Crop Protection Division, National Institute of Agriculture Sciences, Rural Development Administration, Wanju 55365, Korea.
  • Park SC; Laboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, Seoul 08826, Korea.
Viruses ; 12(12)2020 11 30.
Article en En | MEDLINE | ID: mdl-33266226
ABSTRACT
Jumbo phages, which have a genome size of more than 200 kb, have recently been reported for the first time. However, limited information is available regarding their characteristics because few jumbo phages have been isolated. Therefore, in this study, we aimed to isolate and characterize other jumbo phages. We performed comparative genomic analysis of three Erwinia phages (pEa_SNUABM_12, pEa_SNUABM_47, and pEa_SNUABM_50), each of which had a genome size of approximately 360 kb (32.5% GC content). These phages were predicted to harbor 546, 540, and 540 open reading frames with 32, 34, and 35 tRNAs, respectively. Almost all of the genes in these phages could not be functionally annotated but showed high sequence similarity with genes encoded in Serratia phage BF, a member of Eneladusvirus. The detailed comparative and phylogenetic analyses presented in this study contribute to our understanding of the diversity and evolution of Erwinia phage and the genus Eneladusvirus.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Contexto en salud: 3_ND Problema de salud: 3_neglected_diseases / 3_zoonosis Asunto principal: Bacteriófagos / Myoviridae / Erwinia amylovora Tipo de estudio: Prognostic_studies Idioma: En Revista: Viruses Año: 2020 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Contexto en salud: 3_ND Problema de salud: 3_neglected_diseases / 3_zoonosis Asunto principal: Bacteriófagos / Myoviridae / Erwinia amylovora Tipo de estudio: Prognostic_studies Idioma: En Revista: Viruses Año: 2020 Tipo del documento: Article
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