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A pilot study of eDNA metabarcoding to estimate plant biodiversity by an alpine glacier core (Adamello glacier, North Italy).
Varotto, Claudio; Pindo, Massimo; Bertoni, Elena; Casarotto, Christian; Camin, Federica; Girardi, Matteo; Maggi, Valter; Cristofori, Antonella.
Afiliación
  • Varotto C; Research and Innovation Centre, Fondazione Edmund Mach, San Michele All'Adige, TN, Italy.
  • Pindo M; Research and Innovation Centre, Fondazione Edmund Mach, San Michele All'Adige, TN, Italy.
  • Bertoni E; Uppsala University, Uppsala, Sweden.
  • Casarotto C; Geology Department, Science Museum (MUSE), Trento, Italy.
  • Camin F; Research and Innovation Centre, Fondazione Edmund Mach, San Michele All'Adige, TN, Italy.
  • Girardi M; Research and Innovation Centre, Fondazione Edmund Mach, San Michele All'Adige, TN, Italy.
  • Maggi V; Earth and Environmental Sciences, University of Milano Bicocca, Milan, Italy.
  • Cristofori A; Research and Innovation Centre, Fondazione Edmund Mach, San Michele All'Adige, TN, Italy. antonella.cristofori@fmach.it.
Sci Rep ; 11(1): 1208, 2021 01 13.
Article en En | MEDLINE | ID: mdl-33441696
Current biodiversity loss is a major concern and thus biodiversity assessment of modern ecosystems is compelling and needs to be contextualized on a longer timescale. High Throughput Sequencing (HTS) is progressively becoming a major source of data on biodiversity time series. In this multi proxy study, we tested, for the first time, the potential of HTS to estimate plant biodiversity archived in the surface layers of a temperate alpine glacier, amplifying the trnL barcode for vascular plants from eDNA of firn samples. A 573 cm long core was drilled by the Adamello glacier and cut into sections; produced samples were analyzed for physical properties, stable isotope ratio, and plant biodiversity by eDNA metabarcoding and conventional light microscopy analysis. Results highlighted the presence of pollen and plant remains within the distinct layers of snow, firn and ice. While stable isotope ratio showed a scarcely informative pattern, DNA metabarcoding described distinct plant species composition among the different samples, with a broad taxonomic representation of the biodiversity of the catchment area and a high-ranking resolution. New knowledge on climate and plant biodiversity changes of large catchment areas can be obtained by this novel approach, relevant for future estimates of climate change effects.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Contexto en salud: 2_ODS3 Problema de salud: 2_quimicos_contaminacion Asunto principal: Plantas / ADN de Plantas / ADN Ambiental País/Región como asunto: Europa Idioma: En Revista: Sci Rep Año: 2021 Tipo del documento: Article País de afiliación: Italia

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Contexto en salud: 2_ODS3 Problema de salud: 2_quimicos_contaminacion Asunto principal: Plantas / ADN de Plantas / ADN Ambiental País/Región como asunto: Europa Idioma: En Revista: Sci Rep Año: 2021 Tipo del documento: Article País de afiliación: Italia
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