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Using normative modelling to detect disease progression in mild cognitive impairment and Alzheimer's disease in a cross-sectional multi-cohort study.
Pinaya, Walter H L; Scarpazza, Cristina; Garcia-Dias, Rafael; Vieira, Sandra; Baecker, Lea; F da Costa, Pedro; Redolfi, Alberto; Frisoni, Giovanni B; Pievani, Michela; Calhoun, Vince D; Sato, João R; Mechelli, Andrea.
Afiliación
  • Pinaya WHL; Department of Psychosis Studies, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK. walter.diaz_sanz@kcl.ac.uk.
  • Scarpazza C; Center of Mathematics, Computing, and Cognition, Universidade Federal do ABC, Santo André, Brazil. walter.diaz_sanz@kcl.ac.uk.
  • Garcia-Dias R; Department of Biomedical Engineering, School of Biomedical Engineering and Imaging Sciences, King's College London, London, UK. walter.diaz_sanz@kcl.ac.uk.
  • Vieira S; Department of Psychosis Studies, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.
  • Baecker L; Department of General Psychology, University of Padua, Padua, Italy.
  • F da Costa P; Department of Psychosis Studies, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.
  • Redolfi A; Department of Psychosis Studies, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.
  • Frisoni GB; Department of Psychosis Studies, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.
  • Pievani M; Department of Neuroimaging, Institute of Psychiatry, Psychology and Neuroscience, King's College London, London, UK.
  • Calhoun VD; Centre for Brain and Cognitive Development, Birkbeck College, University of London, London, UK.
  • Sato JR; Laboratory of Neuroinformatics, IRCCS Istituto Centro San Giovanni di Dio Fatebenefratelli, Brescia, Italy.
  • Mechelli A; Laboratory of Alzheimer's Neuroimaging and Epidemiology, IRCCS Istituto Centro San Giovanni di Dio Fatebenefratelli, Brescia, Italy.
Sci Rep ; 11(1): 15746, 2021 08 03.
Article en En | MEDLINE | ID: mdl-34344910
ABSTRACT
Normative modelling is an emerging method for quantifying how individuals deviate from the healthy populational pattern. Several machine learning models have been implemented to develop normative models to investigate brain disorders, including regression, support vector machines and Gaussian process models. With the advance of deep learning technology, the use of deep neural networks has also been proposed. In this study, we assessed normative models based on deep autoencoders using structural neuroimaging data from patients with Alzheimer's disease (n = 206) and mild cognitive impairment (n = 354). We first trained the autoencoder on an independent dataset (UK Biobank dataset) with 11,034 healthy controls. Then, we estimated how each patient deviated from this norm and established which brain regions were associated to this deviation. Finally, we compared the performance of our normative model against traditional classifiers. As expected, we found that patients exhibited deviations according to the severity of their clinical condition. The model identified medial temporal regions, including the hippocampus, and the ventricular system as critical regions for the calculation of the deviation score. Overall, the normative model had comparable cross-cohort generalizability to traditional classifiers. To promote open science, we are making all scripts and the trained models available to the wider research community.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Encéfalo / Modelos Estadísticos / Redes Neurales de la Computación / Enfermedad de Alzheimer / Disfunción Cognitiva / Aprendizaje Automático Tipo de estudio: Etiology_studies / Incidence_studies / Observational_studies / Prevalence_studies / Prognostic_studies / Risk_factors_studies Límite: Aged / Female / Humans / Male / Middle aged Idioma: En Revista: Sci Rep Año: 2021 Tipo del documento: Article País de afiliación: Reino Unido

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Encéfalo / Modelos Estadísticos / Redes Neurales de la Computación / Enfermedad de Alzheimer / Disfunción Cognitiva / Aprendizaje Automático Tipo de estudio: Etiology_studies / Incidence_studies / Observational_studies / Prevalence_studies / Prognostic_studies / Risk_factors_studies Límite: Aged / Female / Humans / Male / Middle aged Idioma: En Revista: Sci Rep Año: 2021 Tipo del documento: Article País de afiliación: Reino Unido
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