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Tardigrade Secretory-Abundant Heat-Soluble Protein Has a Flexible ß-Barrel Structure in Solution and Keeps This Structure in Dehydration.
Miyazawa, Kazuhisa; Itoh, Satoru G; Watanabe, Hiroki; Uchihashi, Takayuki; Yanaka, Saeko; Yagi-Utsumi, Maho; Kato, Koichi; Arakawa, Kazuharu; Okumura, Hisashi.
Afiliación
  • Miyazawa K; Department of Structural Molecular Science, The Graduate University for Advanced Studies (SOKENDAI), Okazaki, Aichi 444-8787, Japan.
  • Itoh SG; Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan.
  • Watanabe H; Institute for Molecular Science (IMS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8585, Japan.
  • Uchihashi T; Department of Structural Molecular Science, The Graduate University for Advanced Studies (SOKENDAI), Okazaki, Aichi 444-8787, Japan.
  • Yanaka S; Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan.
  • Yagi-Utsumi M; Institute for Molecular Science (IMS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8585, Japan.
  • Kato K; Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan.
  • Arakawa K; Department of Physics, Nagoya University, Nagoya 464-8602, Japan.
  • Okumura H; Exploratory Research Center on Life and Living Systems (ExCELLS), National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan.
J Phys Chem B ; 125(32): 9145-9154, 2021 08 19.
Article en En | MEDLINE | ID: mdl-34375104
Secretory-abundant heat-soluble (SAHS) proteins are unique heat-soluble proteins of Tardigrada and are believed to play an essential role in anhydrobiosis, a latent state of life induced by desiccation. To investigate the dynamic properties, molecular dynamics (MD) simulations of a SAHS protein, RvSAHS1, were performed in solution and under dehydrating conditions. For comparison purposes, MD simulations of a human liver-type fatty-acid binding protein (LFABP) were performed in solution. Furthermore, high-speed atomic force microscopy observations were conducted to ascertain the results of the MD simulations. Three properties of RvSAHS1 were found as follows. (1) The entrance region of RvSAHS1 is more flexible and can be more extensive in solutions compared with that of a human LFABP because there is no salt bridge between the ßD and ßE strands. (2) The intrinsically disordered domain in the N-terminal region significantly fluctuates and can form an amphiphilic α-helix. (3) The size of the entrance region gets smaller along with dehydration, keeping the ß-barrel structure. Overall, the obtained results provide atomic-level dynamics of SAHS proteins.

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: J Phys Chem B Asunto de la revista: QUIMICA Año: 2021 Tipo del documento: Article País de afiliación: Japón

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Idioma: En Revista: J Phys Chem B Asunto de la revista: QUIMICA Año: 2021 Tipo del documento: Article País de afiliación: Japón
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