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Differential Interactome Based Drug Repositioning Unraveled Abacavir, Exemestane, Nortriptyline Hydrochloride, and Tolcapone as Potential Therapeutics for Colorectal Cancers.
Beklen, Hande; Arslan, Sema; Gulfidan, Gizem; Turanli, Beste; Ozbek, Pemra; Karademir Yilmaz, Betul; Arga, Kazim Yalcin.
Afiliación
  • Beklen H; Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.
  • Arslan S; Department of Biochemistry, School of Medicine, Marmara University, Istanbul, Turkey.
  • Gulfidan G; Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.
  • Turanli B; Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.
  • Ozbek P; Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.
  • Karademir Yilmaz B; Department of Biochemistry, School of Medicine, Marmara University, Istanbul, Turkey.
  • Arga KY; Genetic and Metabolic Diseases Research and Investigation Center (GEMHAM), Marmara University, Istanbul, Turkey.
Front Bioinform ; 1: 710591, 2021.
Article en En | MEDLINE | ID: mdl-36303724
There is a critical requirement for alternative strategies to provide the better treatment in colorectal cancer (CRC). Hence, our goal was to propose novel biomarkers as well as drug candidates for its treatment through differential interactome based drug repositioning. Differentially interacting proteins and their modules were identified, and their prognostic power were estimated through survival analyses. Drug repositioning was carried out for significant target proteins, and candidate drugs were analyzed via in silico molecular docking prior to in vitro cell viability assays in CRC cell lines. Six modules (mAPEX1, mCCT7, mHSD17B10, mMYC, mPSMB5, mRAN) were highlighted considering their prognostic performance. Drug repositioning resulted in eight drugs (abacavir, ribociclib, exemestane, voriconazole, nortriptyline hydrochloride, theophylline, bromocriptine mesylate, and tolcapone). Moreover, significant in vitro inhibition profiles were obtained in abacavir, nortriptyline hydrochloride, exemestane, tolcapone, and theophylline (positive control). Our findings may provide new and complementary strategies for the treatment of CRC.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Tipo de estudio: Prognostic_studies Idioma: En Revista: Front Bioinform Año: 2021 Tipo del documento: Article País de afiliación: Turquía

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Tipo de estudio: Prognostic_studies Idioma: En Revista: Front Bioinform Año: 2021 Tipo del documento: Article País de afiliación: Turquía
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