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Cross-species transcriptomic atlas of dorsal root ganglia reveals species-specific programs for sensory function.
Jung, Min; Dourado, Michelle; Maksymetz, James; Jacobson, Amanda; Laufer, Benjamin I; Baca, Miriam; Foreman, Oded; Hackos, David H; Riol-Blanco, Lorena; Kaminker, Joshua S.
Afiliación
  • Jung M; Department of OMNI Bioinformatics, Genentech, Inc., South San Francisco, CA, USA.
  • Dourado M; Department of Neuroscience, Genentech, Inc., South San Francisco, CA, USA.
  • Maksymetz J; Department of Neuroscience, Genentech, Inc., South San Francisco, CA, USA.
  • Jacobson A; Department of Immunology Discovery, Genentech, Inc., South San Francisco, CA, USA.
  • Laufer BI; Department of OMNI Bioinformatics, Genentech, Inc., South San Francisco, CA, USA.
  • Baca M; Department of Pathology, Genentech, Inc., South San Francisco, CA, USA.
  • Foreman O; Department of Pathology, Genentech, Inc., South San Francisco, CA, USA.
  • Hackos DH; Department of Neuroscience, Genentech, Inc., South San Francisco, CA, USA. hackos.david@gene.com.
  • Riol-Blanco L; Department of Immunology Discovery, Genentech, Inc., South San Francisco, CA, USA. lorenarb@23andme.com.
  • Kaminker JS; Department of OMNI Bioinformatics, Genentech, Inc., South San Francisco, CA, USA. kaminker@gene.com.
Nat Commun ; 14(1): 366, 2023 01 23.
Article en En | MEDLINE | ID: mdl-36690629
ABSTRACT
Sensory neurons of the dorsal root ganglion (DRG) are critical for maintaining tissue homeostasis by sensing and initiating responses to stimuli. While most preclinical studies of DRGs are conducted in rodents, much less is known about the mechanisms of sensory perception in primates. We generated a transcriptome atlas of mouse, guinea pig, cynomolgus monkey, and human DRGs by implementing a common laboratory workflow and multiple data-integration approaches to generate high-resolution cross-species mappings of sensory neuron subtypes. Using our atlas, we identified conserved core modules highlighting subtype-specific biological processes related to inflammatory response. We also identified divergent expression of key genes involved in DRG function, suggesting species-specific adaptations specifically in nociceptors that likely point to divergent function of nociceptors. Among these, we validated that TAFA4, a member of the druggable genome, was expressed in distinct populations of DRG neurons across species, highlighting species-specific programs that are critical for therapeutic development.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Transcriptoma / Ganglios Espinales Límite: Animals / Humans Idioma: En Revista: Nat Commun Asunto de la revista: BIOLOGIA / CIENCIA Año: 2023 Tipo del documento: Article País de afiliación: Estados Unidos

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Transcriptoma / Ganglios Espinales Límite: Animals / Humans Idioma: En Revista: Nat Commun Asunto de la revista: BIOLOGIA / CIENCIA Año: 2023 Tipo del documento: Article País de afiliación: Estados Unidos
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