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The Genome of the Soybean Gall Midge ( Resseliella maxima ).
Melotto, Gloria; Jones, Megan W; Bosley, Kathryn; Flack, Nicole; Frank, Lexi E; Jacobson, Emily; Kipp, Evan J; Nelson, Sally; Ramirez, Mauricio; Walls, Carrie; Koch, Robert L; Lindsey, Amelia R I; Faulk, Christopher.
Afiliación
  • Melotto G; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Jones MW; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Bosley K; Department of Animal Science, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Flack N; Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota.
  • Frank LE; Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota.
  • Jacobson E; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Kipp EJ; Department of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota.
  • Nelson S; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Ramirez M; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Walls C; Department of Animal Science, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Koch RL; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Lindsey ARI; Department of Entomology, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
  • Faulk C; Department of Animal Science, College of Food, Agricultural and Natural Resource Sciences, University of Minnesota.
bioRxiv ; 2023 Feb 12.
Article en En | MEDLINE | ID: mdl-36798210
The cecidomyiid fly, soybean gall midge, Resseliella maxima Gagné, is a recently discovered insect that feeds on soybean plants in the Midwest US. Resseliella maxima larvae feed on soybean stems which may induce plant death and can cause considerable yield losses, making it an important agricultural pest. From three pools of 50 adults each, we used long-read nanopore sequencing to assemble a R. maxima reference genome. The final genome assembly is 206 Mb with 64.88X coverage, consisting of 1009 contigs with an N50 size of 714 kb. The assembly is high quality with a BUSCO score of 87.8%. Genome-wide GC level is 31.60% and DNA methylation was measured at 1.07%. The R. maxima genome is comprised of 21.73% repetitive DNA, which is in line with other cecidomyiids. Protein prediction annotated 14,798 coding genes with 89.9% protein BUSCO score. Mitogenome analysis indicated that R. maxima assembly is a single circular contig of 15,301 bp and shares highest identity to the mitogenome of the Asian rice gall midge, Orseolia oryzae (Wood-Mason). The R. maxima genome has one of the highest completeness levels for a cecidomyiid and will provide a resource for research focused on the biology, genetics, and evolution of cecidomyiids, as well as plant-insect interactions in this important agricultural pest.

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Tipo de estudio: Prognostic_studies Idioma: En Revista: BioRxiv Año: 2023 Tipo del documento: Article

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Tipo de estudio: Prognostic_studies Idioma: En Revista: BioRxiv Año: 2023 Tipo del documento: Article
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