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Rapid analyzing mixed STR profiles based on the global minimum residual method.
Li, Xin; Fan, Hong; Zhao, Xing-Chun; Fan, Xiao-Nuo; Yao, Ruo-Xia.
Afiliación
  • Li X; School of Computer Science, Shaanxi Normal University, Xi'an 710119, China.
  • Fan H; School of Computer Science, Shaanxi Normal University, Xi'an 710119, China.
  • Zhao XC; The institute of Forensic Science, Ministry of Public Security, Beijing 100038, China.
  • Fan XN; Department of Biology, Boston University, Boston 02215, USA.
  • Yao RX; School of Computer Science, Shaanxi Normal University, Xi'an 710119, China.
Yi Chuan ; 45(10): 933-944, 2023 Oct 20.
Article en En | MEDLINE | ID: mdl-37872115
ABSTRACT
The analysis of mixed short tandem repeat (STR) profiles has been long considered as a difficult challenge in the forensic DNA analysis. In the context of China, the current approach to analyze mixed STR profiles depends mostly on forensic manual method. However, besides the inefficiency, this technique is also susceptible to subjective biases in interpreting analysis results, which can hardly meet up with the growing demand for STR profiles analysis. In response, this study introduces an innovative method known as the global minimum residual method, which not only predicts the proportion of each contributor within a mixture, but also delivers accurate analysis results. The global minimum residual method first gives new definitions to the mixture proportion, then optimizes the allele model. After that, it comprehensively considers all loci present in the STR profile, accumulates and sums the residual values of each locus and selects the mixture proportion with the minimum accumulative sum as the inference result. Furthermore, the grey wolf optimizer is also employed to expedite the search for the optimal value. Notably, for two-person STR profiles, the high accuracy and remarkable efficiency of the global minimum residual method can bring convenience to realize extensive STR profile analysis. The optimization scheme established in this research has exhibited exceptional outcomes in practical applications, boasting significant utility and offering an innovative avenue in the realm of mixed STR profile analysis.
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Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Dermatoglifia del ADN / Repeticiones de Microsatélite Límite: Humans País/Región como asunto: Asia Idioma: En Revista: Yi Chuan Asunto de la revista: GENETICA Año: 2023 Tipo del documento: Article País de afiliación: China

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Dermatoglifia del ADN / Repeticiones de Microsatélite Límite: Humans País/Región como asunto: Asia Idioma: En Revista: Yi Chuan Asunto de la revista: GENETICA Año: 2023 Tipo del documento: Article País de afiliación: China
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