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Whole genome sequencing of a novel sea anemone (Actinostola sp.) from a deep-sea hydrothermal vent.
Liu, Chang; Bian, Chao; Gao, Qiang; Gao, Zijian; Huang, Yu; Wang, Lingling; Shi, Qiong; Song, Linsheng.
Afiliación
  • Liu C; Liaoning Key Laboratory of Marine Animal Immunology, Dalian Ocean University, Dalian, 116023, China.
  • Bian C; Laboratory of Aquatic Genomics, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, 518057, China.
  • Gao Q; Liaoning Key Laboratory of Marine Animal Immunology, Dalian Ocean University, Dalian, 116023, China.
  • Gao Z; Southern Laboratory of Ocean Science and Engineering, Zhuhai, 519000, China.
  • Huang Y; Shenzhen Key Lab of Marine Genomics, BGI Academy of Marine Sciences, BGI Marine, Shenzhen, 518081, China.
  • Wang L; Shenzhen Key Lab of Marine Genomics, BGI Academy of Marine Sciences, BGI Marine, Shenzhen, 518081, China.
  • Shi Q; Liaoning Key Laboratory of Marine Animal Immunology, Dalian Ocean University, Dalian, 116023, China. wanglingling@dlou.edu.cn.
  • Song L; Southern Laboratory of Ocean Science and Engineering, Zhuhai, 519000, China. wanglingling@dlou.edu.cn.
Sci Data ; 11(1): 102, 2024 Jan 22.
Article en En | MEDLINE | ID: mdl-38253640
ABSTRACT
Deep-sea hydrothermal vents are usually considered as extreme environments with high pressure, high temperature, scarce food, and chemical toxicity, while many local inhabitants have evolved special adaptive mechanisms for residence in this representative ecosystem. In this study, we constructed a high-quality genome assembly for a novel deep-sea anemone species (Actinostola sp.) that was resident at a depth of 2,971 m in an Edmond vent along the central Indian Ocean ridge, with a total size of 424.3 Mb and a scaffold N50 of 383 kb. The assembled genome contained 265 Mb of repetitive sequences and 20,812 protein-coding genes. Taken together, our reference genome provides a valuable genetic resource for exploring the evolution and adaptive clues of this deep-sea anemone.
Asunto(s)

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Anémonas de Mar / Genoma Límite: Animals Idioma: En Revista: Sci Data Año: 2024 Tipo del documento: Article País de afiliación: China

Texto completo: 1 Colección: 01-internacional Base de datos: MEDLINE Asunto principal: Anémonas de Mar / Genoma Límite: Animals Idioma: En Revista: Sci Data Año: 2024 Tipo del documento: Article País de afiliación: China
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