Digger: directed annotation of immunoglobulin and T cell receptor V, D, and J gene sequences and assemblies.
Bioinformatics
; 40(3)2024 Mar 04.
Article
en En
| MEDLINE
| ID: mdl-38478393
ABSTRACT
SUMMARY:
Knowledge of immunoglobulin and T cell receptor encoding genes is derived from high-quality genomic sequencing. High-throughput sequencing is delivering large volumes of data, and precise, high-throughput approaches to annotation are needed. Digger is an automated tool that identifies coding and regulatory regions of these genes, with results comparable to those obtained by current expert curational methods. AVAILABILITY AND IMPLEMENTATION Digger is published under open source license at https//github.com/williamdlees/Digger and is available as a Python package and a Docker container.
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Asunto principal:
Programas Informáticos
/
Receptores de Antígenos de Linfocitos T
Idioma:
En
Revista:
Bioinformatics
Asunto de la revista:
INFORMATICA MEDICA
Año:
2024
Tipo del documento:
Article
País de afiliación:
Israel