Benchmarking NGS-Based HLA Typing Algorithms.
Methods Mol Biol
; 2809: 87-99, 2024.
Article
en En
| MEDLINE
| ID: mdl-38907892
ABSTRACT
Knowledge of the expected accuracy of HLA typing algorithms is important when choosing between algorithms and when evaluating the HLA typing predictions of an algorithm. This chapter guides the reader through an example benchmarking study that evaluates the performances of four NGS-based HLA typing algorithms as well as outlining factors to consider, when designing and running such a benchmarking study. The code related to this benchmarking workflow can be found at https//github.com/nikolasthuesen/springers-hla-benchmark/ .
Palabras clave
Texto completo:
1
Colección:
01-internacional
Base de datos:
MEDLINE
Asunto principal:
Algoritmos
/
Prueba de Histocompatibilidad
/
Benchmarking
/
Secuenciación de Nucleótidos de Alto Rendimiento
Límite:
Humans
Idioma:
En
Revista:
Methods Mol Biol
Asunto de la revista:
BIOLOGIA MOLECULAR
Año:
2024
Tipo del documento:
Article
País de afiliación:
Dinamarca