Marker2sequence, mine your QTL regions for candidate genes.
Bioinformatics
; 28(14): 1921-2, 2012 Jul 15.
Article
em En
| MEDLINE
| ID: mdl-22628524
ABSTRACT
UNLABELLED Marker2sequence (M2S) aims at mining quantitative trait loci (QTLs) for candidate genes. For each gene, within the QTL region, M2S uses data integration technology to integrate putative gene function with associated gene ontology terms, proteins, pathways and literature. As a typical QTL region easily contains several hundreds of genes, this gene list can then be further filtered using a keyword-based query on the aggregated annotations. M2S will help breeders to identify potential candidate genes for their traits of interest. AVAILABILITY:
Marker2sequence is freely accessible at http//www.plantbreeding.wur.nl/BreeDB/marker2seq/. The source code can be obtained at https//github.com/PBR/Marker2Sequence. CONTACT richard.finkers@wur.nl
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Software
/
Mapeamento Cromossômico
/
Biologia Computacional
/
Locos de Características Quantitativas
Tipo de estudo:
Prognostic_studies
Idioma:
En
Revista:
Bioinformatics
Assunto da revista:
INFORMATICA MEDICA
Ano de publicação:
2012
Tipo de documento:
Article
País de afiliação:
Holanda