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SimpleDSFviewer: A tool to analyze and view differential scanning fluorimetry data for characterizing protein thermal stability and interactions.
Sun, Changye; Li, Yong; Yates, Edwin A; Fernig, David G.
Afiliação
  • Sun C; Henan Key Laboratory of Medical Tissue Regeneration, Xinxiang Medical University, Xinxiang, Henan, China.
  • Li Y; Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, UK.
  • Yates EA; Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, UK.
  • Fernig DG; Department of Biochemistry, Institute of Integrative Biology, University of Liverpool, Liverpool, UK.
Protein Sci ; 29(1): 19-27, 2020 01.
Article em En | MEDLINE | ID: mdl-31394001
ABSTRACT
Differential scanning fluorimetry (DSF) is a widely used thermal shift assay for measuring protein stability and protein-ligand interactions that are simple, cheap, and amenable to high throughput. However, data analysis remains a challenge, requiring improved methods. Here, the program SimpleDSFviewer, a user-friendly interface, is described to help the researchers who apply DSF technique in their studies. SimpleDSFviewer integrates melting curve (MC) normalization, smoothing, and melting temperature (Tm) analysis and directly previews analyzed data, providing an efficient analysis tool for DSF. SimpleDSFviewer is developed in Matlab, and it is freely available for all users to use in Matlab workspace or with Matlab Runtime. It is easy to use and an efficient tool for researchers to preview and analyze their data in a very short time.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Proteínas / Biologia Computacional Idioma: En Revista: Protein Sci Assunto da revista: BIOQUIMICA Ano de publicação: 2020 Tipo de documento: Article País de afiliação: China

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Proteínas / Biologia Computacional Idioma: En Revista: Protein Sci Assunto da revista: BIOQUIMICA Ano de publicação: 2020 Tipo de documento: Article País de afiliação: China
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