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An inter-laboratory study to investigate the impact of the bioinformatics component on microbiome analysis using mock communities.
O'Sullivan, Denise M; Doyle, Ronan M; Temisak, Sasithon; Redshaw, Nicholas; Whale, Alexandra S; Logan, Grace; Huang, Jiabin; Fischer, Nicole; Amos, Gregory C A; Preston, Mark D; Marchesi, Julian R; Wagner, Josef; Parkhill, Julian; Motro, Yair; Denise, Hubert; Finn, Robert D; Harris, Kathryn A; Kay, Gemma L; O'Grady, Justin; Ransom-Jones, Emma; Wu, Huihai; Laing, Emma; Studholme, David J; Benavente, Ernest Diez; Phelan, Jody; Clark, Taane G; Moran-Gilad, Jacob; Huggett, Jim F.
Afiliação
  • O'Sullivan DM; Molecular Biology, National Measurement Laboratory, LGC, Queens Road, Teddington, TW11 0LY, Middlesex, UK. denise.osullivan@lgcgroup.com.
  • Doyle RM; Department of Microbiology, Virology and Infection Control, Great Ormond Street Hospital for Children NHS Trust, Great Ormond Street, London, WC1N 3JH, UK.
  • Temisak S; Molecular Biology, National Measurement Laboratory, LGC, Queens Road, Teddington, TW11 0LY, Middlesex, UK.
  • Redshaw N; Molecular Biology, National Measurement Laboratory, LGC, Queens Road, Teddington, TW11 0LY, Middlesex, UK.
  • Whale AS; Molecular Biology, National Measurement Laboratory, LGC, Queens Road, Teddington, TW11 0LY, Middlesex, UK.
  • Logan G; Department of Infection, Immunity and Inflammation, UCL Great Ormond Street Institute of Child Health and Reubens Centre of Paediatric Virology and Metagenomics, 30 Guildford Street, London, WC1N EH, UK.
  • Huang J; Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf, UKE, Martinstraße 52, 20246, Hamburg, Germany.
  • Fischer N; Institute of Medical Microbiology, Virology and Hygiene, University Medical Center Hamburg-Eppendorf, UKE, Martinstraße 52, 20246, Hamburg, Germany.
  • Amos GCA; Department of Bacteriology, TDI, National Institute for Biological Standards and Control, South Mimms, EN6 3QG, UK.
  • Preston MD; Department of Bacteriology, TDI, National Institute for Biological Standards and Control, South Mimms, EN6 3QG, UK.
  • Marchesi JR; School of Biosciences, Cardiff University, Cardiff, CF10 3AX, UK.
  • Wagner J; Division of Digestive Diseases, Imperial College London, London, UK.
  • Parkhill J; Pathogens and Microbes, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
  • Motro Y; Victorian Infectious Disease Reference Laboratory, Peter Doherty Institute for Infection and Immunity, Melbourne, 3000, Australia.
  • Denise H; Pathogens and Microbes, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
  • Finn RD; Department of Veterinary Medicine, University of Cambridge, Madingley Road, Cambridge, CB3 0ES, UK.
  • Harris KA; Department of Health System Management, School of Public Health, Faculty of Health Sciences, Ben-Gurion University of the Negev, Negev, Israel.
  • Kay GL; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.
  • O'Grady J; Department of Genetics, University of Cambridge, Cambridge, UK.
  • Ransom-Jones E; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.
  • Wu H; Department of Microbiology, Virology and Infection Control, Great Ormond Street Hospital for Children NHS Trust, Great Ormond Street, London, WC1N 3JH, UK.
  • Laing E; Medical Microbiology Research Laboratory, Bob Champion Research and Educational Building, University of East Anglia, Norwich, NR4 7UQ, UK.
  • Studholme DJ; Quadram Institute Bioscience, Norwich Research Park, Norwich, NR4 7UA, UK.
  • Benavente ED; Medical Microbiology Research Laboratory, Bob Champion Research and Educational Building, University of East Anglia, Norwich, NR4 7UQ, UK.
  • Phelan J; Quadram Institute Bioscience, Norwich Research Park, Norwich, NR4 7UA, UK.
  • Clark TG; Department of Biological and Geographical Sciences, School of Applied Sciences, University of Huddersfield, Huddersfield, HD1 3DH, UK.
  • Moran-Gilad J; School of Biosciences, University of Surrey, Guildford, GU2 7XH, UK.
  • Huggett JF; School of Biosciences, University of Surrey, Guildford, GU2 7XH, UK.
Sci Rep ; 11(1): 10590, 2021 05 19.
Article em En | MEDLINE | ID: mdl-34012005
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Biologia Computacional / Metagenômica / Microbiota Tipo de estudo: Evaluation_studies / Prognostic_studies Idioma: En Revista: Sci Rep Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Reino Unido
Texto completo
Adicionar na Minha BVS
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Biologia Computacional / Metagenômica / Microbiota Tipo de estudo: Evaluation_studies / Prognostic_studies Idioma: En Revista: Sci Rep Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Reino Unido