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A novel canine nuclear magnetic resonance spectroscopy-based metabolomics platform: Validation and sample handling.
Ottka, Claudia; Vapalahti, Katariina; Puurunen, Jenni; Vahtera, Laura; Lohi, Hannes.
Afiliação
  • Ottka C; PetBiomics Ltd, Helsinki, Finland.
  • Vapalahti K; Department of Veterinary Biosciences and Department of Medical and Clinical Genetics, University of Helsinki, Helsinki, Finland.
  • Puurunen J; Folkhälsan Research Center, Helsinki, Finland.
  • Vahtera L; PetBiomics Ltd, Helsinki, Finland.
  • Lohi H; Department of Veterinary Biosciences and Department of Medical and Clinical Genetics, University of Helsinki, Helsinki, Finland.
Vet Clin Pathol ; 50(3): 410-426, 2021 Sep.
Article em En | MEDLINE | ID: mdl-34431130
BACKGROUND: Metabolomics has been proven to be an invaluable research tool by providing comprehensive insight into systemic metabolism. However, the lack of scalable and quantitative methods with known reference intervals (RIs) and documented reproducibility has prevented the use of metabolomics in the clinical setting. OBJECTIVE: The objective of this study was to validate the developed quantitative nuclear magnetic resonance (NMR) spectroscopy-based metabolomics platform for canine serum and plasma samples and determine optimal sample handling conditions for its use. METHODS: Altogether, 8247 canine samples were analyzed using a Bruker's 500 MHz NMR spectrometer. Using statistical approaches derived from international guidelines, we studied method precision, measurand stability in various long- and short-term storage conditions, as well as the effect of prolonged contact with red blood cells (RBCs), and differences among blood collection tubes. We also screened interferences with lipemia, hemolysis, and bilirubinemia. The results were compared against routine clinical chemistry methods, and RIs were defined for all measurands. RESULTS: We determined RIs for 123 measurands, most of which were previously unpublished. The reproducibility of the results of the NMR platform appeared generally outstanding, and the integrity of the results can be ensured by following standard blood drawing and processing guidelines. CONCLUSIONS: Owing to the advantages of quantitative results, high reproducibility, and scalability, this canine metabolomics platform holds great potential for numerous clinical and research applications to improve canine health and well-being.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Imageamento por Ressonância Magnética / Metabolômica Tipo de estudo: Guideline Limite: Animals Idioma: En Revista: Vet Clin Pathol Assunto da revista: MEDICINA VETERINARIA / PATOLOGIA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Finlândia

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Imageamento por Ressonância Magnética / Metabolômica Tipo de estudo: Guideline Limite: Animals Idioma: En Revista: Vet Clin Pathol Assunto da revista: MEDICINA VETERINARIA / PATOLOGIA Ano de publicação: 2021 Tipo de documento: Article País de afiliação: Finlândia
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