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Cooperative AI training for cardiothoracic segmentation in computed tomography: An iterative multi-center annotation approach.
Lassen-Schmidt, Bianca; Baessler, Bettina; Gutberlet, Matthias; Berger, Josephine; Brendel, Jan M; Bucher, Andreas M; Emrich, Tilman; Fervers, Philipp; Kottlors, Jonathan; Kuhl, Philipp; May, Matthias S; Penzkofer, Tobias; Persigehl, Thorsten; Renz, Diane; Sähn, Marwin-Jonathan; Siegler, Lisa; Kohlmann, Peter; Köhn, Alexander; Link, Florian; Meine, Hans; Thiemann, Marc T; Hahn, Horst K; Sieren, Malte M.
Afiliação
  • Lassen-Schmidt B; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Baessler B; Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Oberdürrbacher Str. 6 97080, Würzburg, Germany.
  • Gutberlet M; Herzzentrum - University Leipzig, Strümpellstraße 39 04289, Leipzig, Germany.
  • Berger J; Department of Radiology, Diagnostic and Interventional Radiology, University of Tübingen, Hoppe-Seyler-Straße 3 72076, Tübingen, Germany.
  • Brendel JM; Department of Radiology, Diagnostic and Interventional Radiology, University of Tübingen, Hoppe-Seyler-Straße 3 72076, Tübingen, Germany.
  • Bucher AM; Department of Diagnostic and Interventional Radiology, University Hospital Frankfurt, Theodor-Stern-Kai 7 60596, Frankfurt am Main, Germany.
  • Emrich T; University Medical Center of Johannes-Gutenberg-University, Langenbeckstraße 1 55131, Mainz, Germany; Department of Diagnostic and Interventional Radiology, and Division of Cardiovascular Imaging, Department of Radiology and Radiological Science, Medical University of South Carolina, Charleston, USA
  • Fervers P; Department of Diagnostic and Interventional Radiology, University Hospital Cologne, Kerpener Str. 62 50937, Köln, Germany.
  • Kottlors J; Department of Diagnostic and Interventional Radiology, University Hospital Cologne, Kerpener Str. 62 50937, Köln, Germany.
  • Kuhl P; Department of Diagnostic and Interventional Radiology, University Hospital Würzburg, Oberdürrbacher Str. 6 97080, Würzburg, Germany.
  • May MS; Department of Radiology, University Hospital Erlangen, Maximilianspl. 1 91054, Erlangen, Germany.
  • Penzkofer T; Department of Radiology, Charité, University Hospital Berlin, Augustenburger Pl. 1 13353, Berlin, Germany.
  • Persigehl T; Department of Diagnostic and Interventional Radiology, University Hospital Cologne, Kerpener Str. 62 50937, Köln, Germany.
  • Renz D; Institute of Diagnostic and Interventional Radiology, Department of Pediatric Radiology, Hannover Medical School, Carl-Neuberg-Straße 1 30625, Hannover, Germany.
  • Sähn MJ; Department of Diagnostic and Interventional Radiology, University Hospital Aachen, Pauwelsstraße 30 52074, Aachen, Germany.
  • Siegler L; Department of Radiology, University Hospital Erlangen, Maximilianspl. 1 91054, Erlangen, Germany.
  • Kohlmann P; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Köhn A; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Link F; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Meine H; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Thiemann MT; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Hahn HK; Fraunhofer Institute for Digital Medicine MEVIS, Max-von-Laue-Str. 2 28359, Bremen, Germany.
  • Sieren MM; University of Bremen, Department of Mathematics/Computer Science, Bibliothekstraße 5 28359, Bremen, Germany.
Eur J Radiol ; 176: 111534, 2024 07.
Article em En | MEDLINE | ID: mdl-38820951
ABSTRACT

PURPOSE:

Radiological reporting is transitioning to quantitative analysis, requiring large-scale multi-center validation of biomarkers. A major prerequisite and bottleneck for this task is the voxelwise annotation of image data, which is time-consuming for large cohorts. In this study, we propose an iterative training workflow to support and facilitate such segmentation tasks, specifically for high-resolution thoracic CT data.

METHODS:

Our study included 132 thoracic CT scans from clinical practice, annotated by 13 radiologists. In three iterative training experiments, we aimed to improve and accelerate segmentation of the heart and mediastinum. Each experiment started with manual segmentation of 5-25 CT scans, which served as training data for a nnU-Net. Further iterations incorporated AI pre-segmentation and human correction to improve accuracy, accelerate the annotation process, and reduce human involvement over time.

RESULTS:

Results showed consistent improvement in AI model quality with each iteration. Resampled datasets improved the Dice similarity coefficients for both the heart (DCS 0.91 [0.88; 0.92]) and the mediastinum (DCS 0.95 [0.94; 0.95]). Our AI models reduced human interaction time by 50 % for heart and 70 % for mediastinum segmentation in the most potent iteration. A model trained on only five datasets achieved satisfactory results (DCS > 0.90).

CONCLUSIONS:

The iterative training workflow provides an efficient method for training AI-based segmentation models in multi-center studies, improving accuracy over time and simultaneously reducing human intervention. Future work will explore the use of fewer initial datasets and additional pre-processing methods to enhance model quality.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Tomografia Computadorizada por Raios X Limite: Humans Idioma: En Revista: Eur J Radiol Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Alemanha

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Tomografia Computadorizada por Raios X Limite: Humans Idioma: En Revista: Eur J Radiol Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Alemanha
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