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1.
J Neurosci Methods ; : 110247, 2024 Aug 09.
Article in English | MEDLINE | ID: mdl-39128599

ABSTRACT

The prevalence of brain tumor disorders is currently a global issue. In general, radiography, which includes a large number of images, is an efficient method for diagnosing these life-threatening disorders. The biggest issue in this area is that it takes a radiologist a long time and is physically strenuous to look at all the images. As a result, research into developing systems based on machine learning to assist radiologists in diagnosis continues to rise daily. Convolutional neural networks (CNNs), one type of deep learning approach, have been pivotal in achieving state-of-the-art results in several medical imaging applications, including the identification of brain tumors. CNN hyperparameters are typically set manually for segmentation and classification, which might take a while and increase the chance of using suboptimal hyperparameters for both tasks. Bayesian optimization is a useful method for updating the deep CNN's optimal hyperparameters. The CNN network, however, can be considered a "black box" model because of how difficult it is to comprehend the information it stores because of its complexity. Therefore, this problem can be solved by using Explainable Artificial Intelligence (XAI) tools, which provide doctors with a realistic explanation of CNN's assessments. Implementation of deep learning-based systems in real-time diagnosis is still rare. One of the causes could be that these methods don't quantify the Uncertainty in the predictions, which could undermine trust in the AI-based diagnosis of diseases. To be used in real-time medical diagnosis, CNN-based models must be realistic and appealing, and uncertainty needs to be evaluated. So, a novel three-phase strategy is proposed for segmenting and classifying brain tumors. Segmentation of brain tumors using the DeeplabV3+ model is first performed with tuning of hyperparameters using Bayesian optimization. For classification, features from state-of-the-art deep learning models Darknet53 and mobilenetv2 are extracted and fed to SVM for classification, and hyperparameters of SVM are also optimized using a Bayesian approach. The second step is to understand whatever portion of the images CNN uses for feature extraction using XAI algorithms. Using confusion entropy, the Uncertainty of the Bayesian optimized classifier is finally quantified. Based on a Bayesian-optimized deep learning framework, the experimental findings demonstrate that the proposed method outperforms earlier techniques, achieving a 97% classification accuracy and a 0.98 global accuracy.

2.
PeerJ Comput Sci ; 10: e2138, 2024.
Article in English | MEDLINE | ID: mdl-38983234

ABSTRACT

The recent rapid growth in the number of Saudi female athletes and sports enthusiasts' presence on social media has exposed them to gender-hate speech and discrimination. Hate speech, a harmful worldwide phenomenon, can have severe consequences. Its prevalence in sports has surged alongside the growing influence of social media, with X serving as a prominent platform for the expression of hate speech and discriminatory comments, often targeting women in sports. This research combines two studies that explores online hate speech and gender biases in the context of sports, proposing an automated solution for detecting hate speech targeting women in sports on platforms like X, with a particular focus on Arabic, a challenging domain with limited prior research. In Study 1, semi-structured interviews with 33 Saudi female athletes and sports fans revealed common forms of hate speech, including gender-based derogatory comments, misogyny, and appearance-related discrimination. Building upon the foundations laid by Study 1, Study 2 addresses the pressing need for effective interventions to combat hate speech against women in sports on social media by evaluating machine learning (ML) models for identifying hate speech targeting women in sports in Arabic. A dataset of 7,487 Arabic tweets was collected, annotated, and pre-processed. Term frequency-inverse document frequency (TF-IDF) and part-of-speech (POS) feature extraction techniques were used, and various ML algorithms were trained Random Forest consistently outperformed, achieving accuracy (85% and 84% using TF-IDF and POS, respectively) compared to other methods, demonstrating the effectiveness of both feature sets in identifying Arabic hate speech. The research contribution advances the understanding of online hate targeting Arabic women in sports by identifying various forms of such hate. The systematic creation of a meticulously annotated Arabic hate speech dataset, specifically focused on women's sports, enhances the dataset's reliability and provides valuable insights for future research in countering hate speech against women in sports. This dataset forms a strong foundation for developing effective strategies to address online hate within the unique context of women's sports. The research findings contribute to the ongoing efforts to combat hate speech against women in sports on social media, aligning with the objectives of Saudi Arabia's Vision 2030 and recognizing the significance of female participation in sports.

3.
Front Comput Neurosci ; 18: 1393849, 2024.
Article in English | MEDLINE | ID: mdl-38725868

ABSTRACT

Alzheimer's disease (AD) is a neurodegenerative illness that impairs cognition, function, and behavior by causing irreversible damage to multiple brain areas, including the hippocampus. The suffering of the patients and their family members will be lessened with an early diagnosis of AD. The automatic diagnosis technique is widely required due to the shortage of medical experts and eases the burden of medical staff. The automatic artificial intelligence (AI)-based computerized method can help experts achieve better diagnosis accuracy and precision rates. This study proposes a new automated framework for AD stage prediction based on the ResNet-Self architecture and Fuzzy Entropy-controlled Path-Finding Algorithm (FEcPFA). A data augmentation technique has been utilized to resolve the dataset imbalance issue. In the next step, we proposed a new deep-learning model based on the self-attention module. A ResNet-50 architecture is modified and connected with a self-attention block for important information extraction. The hyperparameters were optimized using Bayesian optimization (BO) and then utilized to train the model, which was subsequently employed for feature extraction. The self-attention extracted features were optimized using the proposed FEcPFA. The best features were selected using FEcPFA and passed to the machine learning classifiers for the final classification. The experimental process utilized a publicly available MRI dataset and achieved an improved accuracy of 99.9%. The results were compared with state-of-the-art (SOTA) techniques, demonstrating the improvement of the proposed framework in terms of accuracy and time efficiency.

4.
SLAS Technol ; 29(4): 100147, 2024 May 23.
Article in English | MEDLINE | ID: mdl-38796034

ABSTRACT

The 2019 novel coronavirus (renamed SARS-CoV-2, and generally referred to as the COVID-19 virus) has spread to 184 countries with over 1.5 million confirmed cases. Such a major viral outbreak demands early elucidation of taxonomic classification and origin of the virus genomic sequence, for strategic planning, containment, and treatment. The emerging global infectious COVID-19 disease by novel Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) presents critical threats to global public health and the economy since it was identified in late December 2019 in China. The virus has gone through various pathways of evolution. Due to the continued evolution of the SARS-CoV-2 pandemic, researchers worldwide are working to mitigate, suppress its spread, and better understand it by deploying deep learning and machine learning approaches. In a general computational context for biomedical data analysis, DNA sequence classification is a crucial challenge. Several machine and deep learning techniques have been used in recent years to complete this task with some success. The classification of DNA sequences is a key research area in bioinformatics as it enables researchers to conduct genomic analysis and detect possible diseases. In this paper, three state-of-the-art deep learning-based models are proposed using two DNA sequence conversion methods. We also proposed a novel multi-transformer deep learning model and pairwise features fusion technique for DNA sequence classification. Furthermore, deep features are extracted from the last layer of the multi-transformer and used in machine-learning models for DNA sequence classification. The k-mer and one-hot encoding sequence conversion techniques have been presented. The proposed multi-transformer achieved the highest performance in COVID DNA sequence classification. Automatic identification and classification of viruses are essential to avoid an outbreak like COVID-19. It also helps in detecting the effect of viruses and drug design.

5.
Front Psychol ; 14: 962854, 2023.
Article in English | MEDLINE | ID: mdl-37663328

ABSTRACT

Problem: Sentiment Analysis (SA) automates the classification of the sentiment of people's attitudes, feelings or reviews employing natural language processing (NLP) and computational approaches. Deep learning has recently demonstrated remarkable success in the field of SA in many languages including Arabic. Arabic sentiment analysis, however, still has to be improved, due to the complexity of the Arabic language's structure, the variety of dialects, and the lack of lexicons. Moreover, in Arabic, anxiety as a psychological sentiment has not been the target of much research. Aim: This paper aims to provide solutions to one of the challenges of Arabic Sentiment Analysis (ASA) using a deep learning model focused on predicting the anxiety level during COVID-19 in Saudi Arabia. Methods: A psychological scale to determine the level of anxiety was built and validated. It was then used to create the Arabic Psychological Lexicon (AraPh) containing 138 different dialectical Arabic words that express anxiety, which was used to annotate our corpus (Aranxiety). Aranxiety comprises 955 Arabic tweets representing the level of user anxiety during COVID-19. Bi-GRU model with word embedding was then applied to analyze the sentiment of the tweets and to determine the anxiety level. Results: For SA, the applied model achieved 88% on accuracy, 89% on precision, 88% on recall, and 87% for F1. A majority of 77% of tweets presented no anxiety, whereas 17% represented mild anxiety and a mere 6% represented high anxiety. Conclusion: The proposed model can be used by the Saudi Ministry of Health and members of the research community to formulate solutions to increase psychological resiliency among the Saudi population.

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