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1.
J Med Genet ; 61(5): 490-501, 2024 Apr 19.
Article in English | MEDLINE | ID: mdl-38296633

ABSTRACT

INTRODUCTION: KCTD15 encodes an oligomeric BTB domain protein reported to inhibit neural crest formation through repression of Wnt/beta-catenin signalling, as well as transactivation by TFAP2. Heterozygous missense variants in the closely related paralogue KCTD1 cause scalp-ear-nipple syndrome. METHODS: Exome sequencing was performed on a two-generation family affected by a distinctive phenotype comprising a lipomatous frontonasal malformation, anosmia, cutis aplasia of the scalp and/or sparse hair, and congenital heart disease. Identification of a de novo missense substitution within KCTD15 led to targeted sequencing of DNA from a similarly affected sporadic patient, revealing a different missense mutation. Structural and biophysical analyses were performed to assess the effects of both amino acid substitutions on the KCTD15 protein. RESULTS: A heterozygous c.310G>C variant encoding p.(Asp104His) within the BTB domain of KCTD15 was identified in an affected father and daughter and segregated with the phenotype. In the sporadically affected patient, a de novo heterozygous c.263G>A variant encoding p.(Gly88Asp) was present in KCTD15. Both substitutions were found to perturb the pentameric assembly of the BTB domain. A crystal structure of the BTB domain variant p.(Gly88Asp) revealed a closed hexameric assembly, whereas biophysical analyses showed that the p.(Asp104His) substitution resulted in a monomeric BTB domain likely to be partially unfolded at physiological temperatures. CONCLUSION: BTB domain substitutions in KCTD1 and KCTD15 cause clinically overlapping phenotypes involving craniofacial abnormalities and cutis aplasia. The structural analyses demonstrate that missense substitutions act through a dominant negative mechanism by disrupting the higher order structure of the KCTD15 protein complex.


Subject(s)
BTB-POZ Domain , Craniofacial Abnormalities , Face , Humans , Abnormalities, Multiple , Co-Repressor Proteins/genetics , Craniofacial Abnormalities/genetics , Ectodermal Dysplasia , Face/abnormalities , Mutation, Missense/genetics , Syndrome
2.
Nat Rev Mol Cell Biol ; 23(5): 350-367, 2022 05.
Article in English | MEDLINE | ID: mdl-35079164

ABSTRACT

Mammalian development demands precision. Millions of molecules must be properly located in temporal order, and their function regulated, to orchestrate important steps in cell cycle progression, apoptosis, migration and differentiation, to shape developing embryos. Ubiquitin and its associated enzymes act as cellular guardians to ensure precise spatio-temporal control of key molecules during each of these important cellular processes. Loss of precision results in numerous examples of embryological disorders or even cancer. This Review discusses the crucial roles of E3 ubiquitin ligases during key steps of early mammalian development and their roles in human disease, and considers how new methods to manipulate and exploit the ubiquitin regulatory machinery - for example, the development of molecular glues and PROTACs - might facilitate clinical therapy.


Subject(s)
Neoplasms , Ubiquitin , Animals , Apoptosis , Humans , Mammals/metabolism , Neoplasms/metabolism , Ubiquitin/metabolism , Ubiquitin-Protein Ligases/metabolism , Ubiquitination
3.
Curr Protoc Cell Biol ; 84(1): e87, 2019 09.
Article in English | MEDLINE | ID: mdl-31483112

ABSTRACT

Whether screening small mammal serum during antibody production or attempting to preserve a stock of precious antibody, this protocol's western blotting method using aliquots containing nanoliter volumes of antibody will benefit researchers. Time-tested western blotting workflows allowing separation and analysis of proteins are routinely utilized in clinical and laboratory settings. The necessity for relatively large quantities of antibody is a major limitation to this universal tool. This article provides a step-by-step protocol for detecting proteins of interest with solutions containing nanoliter volumes of antibody without altering the preceding gel electrophoresis and transfer methods. Important considerations, frequently encountered problems, and means of optimizing reproducibility are discussed. Complementary diagrams, images, and videos are provided. The protocol is demonstrated using 0.3 nanoliters of anti-serum to detect fibronectin in a human foreskin fibroblast cell line. Finally, two support protocols detailing methods of extracting proteins from cultured cells are reported. Published 2019. This article is a US Government work and is in the public domain in the USA.


Subject(s)
Antibodies/analysis , Blotting, Western/methods , Fibroblasts/physiology , Animals , Cell Line , Fibronectins/analysis , Humans , Microchemistry , Nanotechnology , Solutions
4.
Int J Exp Pathol ; 100(3): 144-152, 2019 06.
Article in English | MEDLINE | ID: mdl-31179622

ABSTRACT

This review describes how direct visualization of the dynamic interactions of cells with different extracellular matrix microenvironments can provide novel insights into complex biological processes. Recent studies have moved characterization of cell migration and invasion from classical 2D culture systems into 1D and 3D model systems, revealing multiple differences in mechanisms of cell adhesion, migration and signalling-even though cells in 3D can still display prominent focal adhesions. Myosin II restrains cell migration speed in 2D culture but is often essential for effective 3D migration. 3D cell migration modes can switch between lamellipodial, lobopodial and/or amoeboid depending on the local matrix environment. For example, "nuclear piston" migration can be switched off by local proteolysis, and proteolytic invadopodia can be induced by a high density of fibrillar matrix. Particularly, complex remodelling of both extracellular matrix and tissues occurs during morphogenesis. Extracellular matrix supports self-assembly of embryonic tissues, but it must also be locally actively remodelled. For example, surprisingly focal remodelling of the basement membrane occurs during branching morphogenesis-numerous tiny perforations generated by proteolysis and actomyosin contractility produce a microscopically porous, flexible basement membrane meshwork for tissue expansion. Cells extend highly active blebs or protrusions towards the surrounding mesenchyme through these perforations. Concurrently, the entire basement membrane undergoes translocation in a direction opposite to bud expansion. Underlying this slowly moving 2D basement membrane translocation are highly dynamic individual cell movements. We conclude this review by describing a variety of exciting research opportunities for discovering novel insights into cell-matrix interactions.


Subject(s)
Basement Membrane/metabolism , Cell Movement/physiology , Extracellular Matrix/metabolism , Morphogenesis/physiology , Signal Transduction/physiology , Animals , Cell Adhesion/physiology , Humans
5.
Int J Oral Maxillofac Implants ; 34(3): 692­697, 2019.
Article in English | MEDLINE | ID: mdl-30779820

ABSTRACT

PURPOSE: To examine human mandibular angle integrity alterations accompanying a mandibular body block graft harvest surgical procedure. MATERIALS AND METHODS: Hemimandibles from 24 human cadavers were resected and sorted into one of three groups by residual dental status. The height of each hemimandible body was obtained and recorded. Acrylic bone cement was utilized to mount the hemimandibles at the mandibular condyle. Using standard surgical instruments and techniques, cortical bone of the mandibular body buccal plate was resected from the right hemimandibles. Left hemimandibles were used as a control. Each hemimandible was secured in an Instron 5565 mechanical unit. With forces placed on and perpendicular to the occlusal plane, each hemimandible underwent sequential loading until osseous fracture occurred. Descriptive statistics between grouped data were compared and discussed in terms of mean, minimum, and maximum. The statistical relationship between the maximal load, gender, and mandibular body height were identified. RESULTS: Donor and control hemimandible maximal load mean values were 423.63 N and 957.90 N, respectively. A statistically significant difference was present between maximal loads of donor and control hemimandibles (P < .0001). Correlations of statistical significance were present between mandibular bone height and maximal load in the control hemimandibles (P = .009). Correlations of statistical significance were not found between mandibular bone height, displacement at maximal load, and maximal load in the grafted hemimandibles (P >.05). No statistically significant correlation between dental status and gender was found in the donor and control hemimandibles (P > .05). CONCLUSION: After subjected to a typical block graft harvest surgical procedure, the human mandible's integrity is significantly altered. Gender, dental status, and mandibular bone height do not correlate with maximal load,and thus integrity, of donor and control mandibles.


Subject(s)
Mandible/physiology , Mandibular Condyle/physiology , Mandibular Injuries/physiopathology , Stress, Mechanical , Biomechanical Phenomena , Bone Plates , Cadaver , Humans , Mandible/surgery , Mandibular Condyle/surgery , Models, Anatomic , Tissue Donors
6.
PLoS One ; 13(10): e0205534, 2018.
Article in English | MEDLINE | ID: mdl-30308037

ABSTRACT

Successful disinfection alongside complete endodontic tissue regeneration and revascularization are the most desired clinical outcomes of regenerative endodontics. Despite reported clinical successes, significant limitations to the current regenerative endodontic procedure (REP) have been elucidated. To improve the current REP, an antibiotics and nitric oxide (NO) releasing biomimetic nanomatrix gel was developed. The study evaluates antibacterial effects of an antibiotics and NO releasing biomimetic nanomatrix gel on multispecies endodontic bacteria. Antibiotics, ciprofloxacin (CF) and metronidazole (MN) were mixed and encapsulated within the NO releasing biomimetic nanomatrix gel. The gel was synthesized and self-assembled from peptide amphiphiles containing various functional groups. Antibacterial effects of the antibiotics and NO releasing biomimetic nanomatrix gel were evaluated using bacterial viability assays involving endodontic microorganisms including clinical samples. Pulp-dentin regeneration was evaluated via animal-model experiments. The antibiotics and NO releasing biomimetic nanomatrix gel demonstrated a concentration dependent antibacterial effect. In addition, NO alone demonstrated a concentration dependent antibacterial effect on endodontic microorganism. An in vivo analysis demonstrated the antibiotics and NO releasing biomimetic nanomatrix gel promoted tooth revascularization with maturation of root canals. An optimal concentration of and NO releasing nanomatrix gel is suggested for its potential as a root treatment material for REP and an appropriate protocol for human trials. Further investigation is required to obtain a larger sample size and decide upon ideal growth factor incorporation.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Dental Pulp/drug effects , Dentin/drug effects , Gels , Nitric Oxide/administration & dosage , Regeneration/drug effects , Animals , Biofilms/drug effects , Biomimetic Materials/chemical synthesis , Dental Pulp/diagnostic imaging , Dental Pulp/pathology , Dental Pulp/physiopathology , Dentin/diagnostic imaging , Dentin/pathology , Dentin/physiopathology , Dogs , Drug Delivery Systems , Enterococcus faecalis/drug effects , Enterococcus faecalis/physiology , Gels/chemical synthesis , Gram-Positive Bacterial Infections/diagnostic imaging , Gram-Positive Bacterial Infections/drug therapy , Gram-Positive Bacterial Infections/pathology , Gram-Positive Bacterial Infections/physiopathology , Humans , Nanostructures , Neovascularization, Physiologic/drug effects , Neovascularization, Physiologic/physiology , Pilot Projects , Pulpitis/diagnostic imaging , Pulpitis/drug therapy , Pulpitis/pathology , Pulpitis/physiopathology , Regeneration/physiology , Treponema denticola/drug effects , Treponema denticola/physiology
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