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1.
Prog Neurobiol ; 220: 102374, 2023 01.
Article in English | MEDLINE | ID: mdl-36403864

ABSTRACT

In humans and non-human primates (NHPs), motion and stereopsis are processed within fine-scale cortical sites, including V2 thick stripes and their extensions into areas V3 and V3A that are believed to be under the influence of magnocellular stream. However, in both species, the relative functional organization (overlapping vs. none overlapping) of these sites remains unclear. Using high-resolution functional MRI (fMRI), we found evidence for two minimally-overlapping channels within human extrastriate areas that contribute to processing motion and stereopsis. Across multiple experiments that included different stimuli (random dots, gratings, and natural scenes), the functional selectivity of these channels for motion vs. stereopsis remained consistent. Furthermore, an analysis of resting-state functional connectivity revealed stronger functional connectivity within the two channels rather than between them. This finding provides a new perspective toward the mesoscale organization of the magnocellular stream within the human extrastriate visual cortex, beyond our previous understanding based on animal models.


Subject(s)
Rivers , Visual Cortex , Animals , Humans , Visual Pathways , Depth Perception , Visual Cortex/diagnostic imaging , Magnetic Resonance Imaging , Brain Mapping
2.
Eye (Lond) ; 25(10): 1262-76, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21760626

ABSTRACT

Surgical management of strabismus remains a challenge because surgical success rates, short-term and long-term, are not ideal. Adjustable suture strabismus surgery has been available for decades as a tool to potentially enhance the surgical outcomes. Intellectually, it seems logical that having a second chance to improve the outcome of a strabismus procedure should increase the overall success rate and reduce the reoperation rate. Yet, adjustable suture surgery has not gained universal acceptance, partly because Level 1 evidence of its advantages is lacking, and partly because the learning curve for accurate decision making during suture adjustment may span a decade or more. In this review we describe the indications, techniques, and published results of adjustable suture surgery. We will discuss the option of 'no adjustment' in cases with satisfactory alignment with emphasis on recent advances allowing for delayed adjustment. The use of adjustable sutures in special circumstances will also be reviewed. Consistently improved outcomes in the adjustable arm of nearly all retrospective studies support the advantage of the adjustable option, and strabismus surgeons are advised to become facile in the application of this approach.


Subject(s)
Anesthesia , Oculomotor Muscles/surgery , Ophthalmologic Surgical Procedures , Strabismus/surgery , Suture Techniques , Anesthesia/methods , Female , Humans , Male , Oculomotor Muscles/physiopathology , Reoperation/statistics & numerical data , Strabismus/physiopathology , Sutures , Treatment Outcome
3.
J Biomed Opt ; 11(3): 34025, 2006.
Article in English | MEDLINE | ID: mdl-16822074

ABSTRACT

For the purpose of vision screening, we develop an eye fixation monitor that detects the fovea by its unique radial orientation of birefringent Henle fibers. Polarized near-infrared light is reflected from the foveal area in a bow-tie pattern of polarization states, similar to the Haidinger brush phenomenon. In contrast to previous devices that used scanning systems, this instrument uses no moving parts. It rather utilizes four spots of linearly polarized light-two aligned with the "bright" arms and two aligned with the "dark" arms-of the bow-tie pattern surrounding the fovea. The light reflected from the fundus is imaged onto a quadrant photodetector, whereby the circular polarization component of the polarization state of each reflected patch of light is measured. The signals from the four photodetectors are amplified, digitized, and analyzed. A normalized differential signal is computed to detect central fixation. The algorithm is tested on a computer model, and the apparatus is tested on human subjects. This work demonstrates the feasibility of a fixation monitor with no moving parts.


Subject(s)
Diagnosis, Computer-Assisted/instrumentation , Diagnosis, Computer-Assisted/methods , Fixation, Ocular/physiology , Refraction, Ocular/physiology , Refractometry/instrumentation , Retinoscopes , Adult , Birefringence , Equipment Design , Equipment Failure Analysis , Feasibility Studies , Female , Humans , Male , Middle Aged , Motion , Refractometry/methods
4.
Man Ther ; 8(2): 117-9, 2003 May.
Article in English | MEDLINE | ID: mdl-12890440

ABSTRACT

This paper explores the notion of validity from different perspectives and addresses its integration with clinical reasoning. Whilst valuing the evidence-based practice (EBP) perspective in our quest for validation of practice, the authors posit that other perspectives may provide added value through their potential for offering validity in differing circumstances. The reality of the EBP aspiration is discussed and nuances within the evolved term 'research-enhanced practice' are shared. Validity theory applied through different perspectives may, it is argued help to get to grips with the balancing act of validating manual therapy practice.


Subject(s)
Attitude of Health Personnel , Clinical Competence , Evidence-Based Medicine/standards , Musculoskeletal Manipulations/standards , Evidence-Based Medicine/methods , Humans , Meta-Analysis as Topic , Musculoskeletal Manipulations/methods , Physical Therapy Specialty/standards , Practice Guidelines as Topic , Qualitative Research , Randomized Controlled Trials as Topic , Research Design/standards
5.
Surv Ophthalmol ; 46(3): 269-74, 2001.
Article in English | MEDLINE | ID: mdl-11738434

ABSTRACT

Dynamic retinoscopy is a well described but often overlooked technique that allows rapid assessment of accommodative ability. The key to the technique is the neutralization of the retinoscopic reflex that occurs when the patient accommodates on a target adjacent to the retinoscope. This clinical tool can provide critical data that can help solve treatment dilemmas, such as when a child presents with high hyperopia or when a patient presents at any age with possible accommodative insufficiency. In this review, performance of dynamic retinoscopy will be detailed, with the applicability of the technique demonstrated with use of case examples.


Subject(s)
Accommodation, Ocular , Hyperopia/diagnosis , Vision Tests/methods , Adult , Child , Child, Preschool , Female , Humans , Infant , Male , Refraction, Ocular , Vision, Binocular
6.
J AAPOS ; 5(6): 352-6, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11753254

ABSTRACT

PURPOSE: The term congenital exotropia (XT) is typically reserved for patients presenting in the first year with a large, constant angle, however, no published study provides a rationale for this restrictive definition. In this study, the present classification system for XT was evaluated and differences between infants with constant versus intermittent XT at presentation were characterized. METHODS: Medical records of all patients diagnosed with XT before 12 months of age between 1980 and 1994 were identified by computer search. Exclusion criteria included previous eye muscle surgery, resolution of the XT by 3 months of age, and concomitant systemic or ocular disease. Patients were separated into intermittent XT and constant XT groups. The clinical characteristics and outcomes of these two groups were compared. RESULTS: Of 2018 patients examined on our service during the first year of life for all causes, 23 (1.1 %) met the inclusion criteria. Follow-up data of more than 1 year was available for 13 patients, and of these, 46% had constant XT. The 2 groups had similar clinical features at presentation except for a larger initial angle in the constant XT group (P =.02). Average follow-up was 58 months (range: 13-158 months). Twelve patients (92%) required surgery. The reoperation rate was 27%, and 82% had final horizontal deviations of less than 10 PD. The incidence of A/V-patterns (38%), dissociated vertical deviation (46%), and binocularity (70%) was similar between groups. CONCLUSION: Half of infantile XT patients may present with intermittent XT, with similar clinical outcomes regardless of presentation. Surgical intervention resulted in successful alignment in most cases. More than half the patients developed measurable stereopsis, but none achieved bifixation.


Subject(s)
Exotropia/congenital , Exotropia/physiopathology , Depth Perception/physiology , Exotropia/surgery , Follow-Up Studies , Humans , Infant , Oculomotor Muscles/surgery , Prognosis , Vision, Binocular/physiology
7.
J AAPOS ; 5(6): 388-94, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11753261

ABSTRACT

PURPOSE: Full macular translocation surgery relocates the fovea away from choroidal neovascularization, inducing significant postoperative torsional diplopia. In "limited macular translocation," a saline-induced retinal detachment is followed by scleral imbrication with mattress sutures and spontaneous retinal reattachment. In this study, diplopia was characterized in patients treated with limited macular translocation. METHODS: Two surgeons performed retinal translocation surgery on 250 patients over an 18-month time span. The extent and direction of the retinal translocation, and the amount and location of scleral imbrication, were recorded. All patients complaining of diplopia were referred for ocular motility evaluation and treatment. RESULTS: Thirteen (5.2%) patients complained of occasional or constant diplopia. Imbricating sutures were placed supero-temporally in all cases. Inferior foveal translocation ranged from 200 to 2115 microm (median, 1750 microm). Visual acuity ranged from 20/40 to 20/400 in the operated eye. Prism-and-cover testing underestimated the strabismus when compared with subjective testing. In 3 patients, there was no shift on alternate-cover testing despite binocular diplopia. Excyclotorsion ranged from 0 degrees to 16 degrees. Diplopia resolved in 10 cases with prism; 3 required an occlusive filter for distortion or aniseikonia. One patient underwent successful strabismus surgery to eliminate dependence on prism glasses. CONCLUSIONS: Limited macular translocation only rarely produces symptomatic diplopia. Suprisingly, traditional prism-and-cover testing does not reliably quantify the misalignment. This may result from the combination of a persistent macular scotoma and a repositioned fovea relative to the peripheral retina. Prism therapy is generally satisfactory in the absence of retinal distortion or aniseikonia.


Subject(s)
Choroidal Neovascularization/surgery , Diplopia/etiology , Macula Lutea/transplantation , Postoperative Complications , Aged , Aged, 80 and over , Humans , Middle Aged , Ophthalmologic Surgical Procedures , Sclera/surgery , Suture Techniques , Tissue Transplantation/adverse effects , Visual Acuity
8.
J AAPOS ; 5(5): 329-32, 2001 Oct.
Article in English | MEDLINE | ID: mdl-11641647

ABSTRACT

Traumatic superior oblique dysfunction from cataract surgery appears to be rare, with only 3 reported cases of postoperative Brown syndrome and 1 reported case of postoperative superior oblique weakness. We are not aware of any prior reports of superior oblique overaction occurring after cataract surgery. We describe a patient with acquired superior oblique overaction as a cause of vertical strabismus after cataract surgery. Ocular torsion analysis was essential in localizing the malfunction to the superior oblique muscle. The most likely etiology is myotoxicity from inadvertent intramuscular injection of local anesthetic before cataract surgery.


Subject(s)
Anesthesia, Local/adverse effects , Anesthetics, Combined/adverse effects , Anesthetics, Local/adverse effects , Diplopia/chemically induced , Oculomotor Muscles/drug effects , Phacoemulsification , Strabismus/chemically induced , Bupivacaine/adverse effects , Diplopia/surgery , Female , Humans , Lens Implantation, Intraocular , Lidocaine/adverse effects , Middle Aged , Needlestick Injuries/complications , Oculomotor Muscles/surgery , Strabismus/surgery
11.
J AAPOS ; 5(3): 164-71, 2001 Jun.
Article in English | MEDLINE | ID: mdl-11404743

ABSTRACT

PURPOSE: Philip Knapp described a method, sometimes referred to as the "chicken suture,"of securing a loose nonabsorbable suture to the cut ends of the superior oblique tendon to facilitate future reversal. The purpose of this study is to describe a modification of Knapp's technique to achieve partial, reversible, and intraoperatively adjustable superior oblique weakening. METHODS: The superior oblique tendon was exposed, 2 polyester nonabsorbable sutures were placed 4 mm apart, and the tendon was cut. With the use of a slip knot, the cut ends of the tendon were separated by 2 to 8 mm. Tendon separation was adjusted intraoperatively according to the exaggerated traction test and, in some cases, fundus torsion. Medical records of all patients who underwent surgery with this technique were reviewed and the outcomes tabulated. RESULTS: Twelve patients (16 eyes) were treated for superior oblique overaction and 3 patients (3 eyes) for Brown syndrome. Follow-up was 2 to 46 months (mean, 17 months). Mean superior oblique overaction improved from +1.3 before surgery to +0.3 after surgery, mean A pattern improved from 20 PD to 2 PD, and fundus intorsion improved from +1.2 to +0.3. In Brown syndrome, the mean elevation in adduction improved from -3.8 to -1.0. One patient from each group developed an overcorrection. None of the patients developed recurrence. The patients with Brown syndrome continued to improve over a 1-year period. CONCLUSIONS: The superior oblique tendon suture spacer is effective, intraoperatively adjustable, and technically easier to perform than a silicone expander procedure. This technique should be considered as an alternative for patients requiring superior oblique weakening.


Subject(s)
Ocular Motility Disorders/surgery , Ophthalmologic Surgical Procedures , Suture Techniques , Sutures , Tendons/surgery , Adolescent , Adult , Aged , Child , Child, Preschool , Humans , Middle Aged , Syndrome , Treatment Outcome
12.
Ophthalmology ; 108(4): 738-49, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11297491

ABSTRACT

PURPOSE: To report ocular and renal findings specific to the inheritable entity called papillorenal (also known as renal-coloboma) syndrome and relate these to a common cause. DESIGN: Observational case series and genetic study. PARTICIPANTS: Two unrelated probands presenting with absent central retinal vessels and 11 available family members. TESTING: Doppler ultrasonographic imaging of the optic nerves and kidneys, fluorescein angiography, and genetic testing for PAX2 mutations were performed. In selected cases, indocyanine green angiography, scanning laser ophthalmoscope perimetry, Retinal Thickness Analyzer measurements, visual evoked potentials, and magnetic resonance imaging were also performed. MAIN OUTCOME MEASURES: Better defined characteristics of the papillorenal syndrome. RESULTS: Numerous cilioretinal vessels were present with rudimentary or absent central retinal vessels. Superonasal visual field defects, typical for papillorenal syndrome, corresponded to inferotemporal areas of anomalous retinal and choroidal perfusion and hypoplastic retina. Renal hypoplasia was discovered in two affected members of one family (with previously unsuspected renal failure in one case), and recurrent pyelonephritis was discovered in four affected members of the other family. No PAX2 mutations were detected. CONCLUSIONS: In the papillorenal syndrome, the hereditary absence of central retinal vessels may be missed, leading to confusion with isolated coloboma, low-tension glaucoma, and morning glory anomaly. Greater awareness of this syndrome will avoid unneeded glaucoma therapy, allow earlier recognition of renal diseases, and allow genetic counseling. We propose that the papillorenal syndrome is a primary dysgenesis that causes vascular abnormalities predominantly affecting the eye, kidney, and urinary tract, leading to hypoplasia of these structures. The absence of defects in the PAX2 gene in these families suggests that mutations in other genes may also be responsible for this syndrome.


Subject(s)
Coloboma/diagnosis , Kidney Diseases/diagnosis , Kidney/abnormalities , Optic Disk/abnormalities , Retinal Diseases/diagnosis , Retinal Vessels/abnormalities , Adult , Coloboma/complications , Coloboma/genetics , DNA-Binding Proteins/genetics , Evoked Potentials, Visual , Female , Fluorescein Angiography , Humans , Indocyanine Green , Infant , Kidney/diagnostic imaging , Kidney/pathology , Kidney Diseases/etiology , Kidney Diseases/genetics , Magnetic Resonance Imaging , Male , Middle Aged , Mutation , Optic Disk/diagnostic imaging , Optic Disk/pathology , Optic Nerve/diagnostic imaging , PAX2 Transcription Factor , Retinal Diseases/etiology , Retinal Diseases/genetics , Retinal Vessels/diagnostic imaging , Retinal Vessels/pathology , Syndrome , Transcription Factors/genetics , Ultrasonography, Doppler, Color , Visual Field Tests , Visual Fields
13.
Clin Biomech (Bristol, Avon) ; 15(8): 600-6, 2000 Oct.
Article in English | MEDLINE | ID: mdl-10936432

ABSTRACT

OBJECTIVE: The purpose of the study was to investigate the relationship between measurements of passive flexibility and active stiffness of the ankle plantar-flexor muscles. DESIGN: The study was a correlation design. BACKGROUND: Flexibility has passive and active components. Little information is available regarding the relationship of these measurements in terms of the information that they yield on the state of the muscle-tendon unit. METHODS: Free oscillation data representing active stiffness was obtained using applied masses equivalent to 30%, 60% and 90% of the subject's maximal voluntary contraction. The angle of dorsiflexion, representing passive flexibility, was measured in standing using computer digitisation to obtain the angle.Results. Mean active stiffness values were 14280 N/m (30% maximal voluntary contraction), 22260 N/m (60% maximal voluntary contraction) and 28010 N/m (90% maximal voluntary contraction). Dorsiflexion measurement gave a mean of 34.3 degrees (S.D. 4.8). Correlation's obtained for the association between range of motion and active stiffness were r=0.01 (30% maximal voluntary contraction), r=0.09 (60% maximal voluntary contraction) and r=0.04 (90% maximal voluntary contraction). Moderate reliability coefficients of 0.71 (30% maximal voluntary contraction), 0.78 (60% maximal voluntary contraction) and 0.68 (90% maximal voluntary contraction) were obtained. CONCLUSIONS: The results imply that measurements of passive flexibility and active stiffness of the lower leg musculature are independent measures of components of muscle-tendon unit flexibility. RELEVANCE: Flexibility is a construct with different components of measurement. Etiological studies typically relate static flexibility measurements to injury with conflicting outcomes. This study suggests that static and active flexibility measures yield different information about the muscle tendon unit of the ankle plantar flexors, and that researchers should consider this point in the design of etiological studies.


Subject(s)
Ankle Joint/physiology , Muscle, Skeletal/physiology , Adult , Biomechanical Phenomena , Equipment Design , Female , Fourier Analysis , Humans , Male , Pliability , Signal Processing, Computer-Assisted
14.
Ophthalmology ; 106(11): 2161-7, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10571353

ABSTRACT

OBJECTIVE: To design a system of gonioscopy that will allow greater interobserver reliability and more clearly defined screening cutoffs for angle closure than current systems while being simple to teach and technologically appropriate for use in rural Asia, where the prevalence of angle-closure glaucoma is highest. DESIGN: Clinic-based validation and interobserver reliability trial. PARTICIPANTS: Study 1: 21 patients 18 years of age and older recruited from a university-based specialty glaucoma clinic; study 2: 32 patients 18 years of age and older recruited from the same clinic. INTERVENTION: In study 1, all participants underwent conventional gonioscopy by an experienced observer (GLS) using the Spaeth system and in the same eye also underwent Scheimpflug photography, ultrasonographic measurement of anterior chamber depth and axial length, automatic refraction, and biometric gonioscopy with measurement of the distance from iris insertion to Schwalbe's line using a reticule based in the slit-lamp ocular. In study 2, all participants underwent both conventional gonioscopy and biometric gonioscopy by an experienced gonioscopist (NGC) and a medical student with no previous training in gonioscopy (JK). MAIN OUTCOME MEASURES: Study 1: The association between biometric gonioscopy and conventional gonioscopy, Scheimpflug photography, and other factors known to correlate with the configuration of the angle. Study 2: Interobserver agreement using biometric gonioscopy compared to that obtained with conventional gonioscopy. RESULTS: In study 1, there was an independent, monotonic, statistically significant relationship between biometric gonioscopy and both Spaeth angle (P = 0.001, t test) and Spaeth insertion (P = 0.008, t test) grades. Biometric gonioscopy correctly identified six of six patients with occludable angles according to Spaeth criteria. Biometric gonioscopic grade was also significantly associated with the anterior chamber angle as measured by Scheimpflug photography (P = 0.005, t test). In study 2, the intraclass correlation coefficient between graders for biometric gonioscopy (0.97) was higher than for Spaeth angle grade (0.72) or Spaeth insertion grade (0.84). CONCLUSION: Biometric gonioscopy correlates well with other measures of the anterior chamber angle, shows a higher degree of interobserver reliability than conventional gonioscopy, and can readily be learned by an inexperienced observer.


Subject(s)
Anterior Chamber/pathology , Glaucoma, Angle-Closure/diagnosis , Glaucoma, Open-Angle/diagnosis , Gonioscopy/methods , Adult , Aged , Aged, 80 and over , Anterior Chamber/diagnostic imaging , Biometry , Female , Humans , Male , Middle Aged , Observer Variation , Photography , Reproducibility of Results , Ultrasonography
15.
Binocul Vis Strabismus Q ; 14(2): 107-10, 1999.
Article in English | MEDLINE | ID: mdl-10506687

ABSTRACT

PURPOSE: To evaluate the acceptance of ocular spray administration. METHODS: A randomized, single-masked comparison in a cohort of children from 3 to 13 years. Assessment of patient pain was recorded on a visual analog scale. Cycloplegia was assessed by an ophthalmologist masked to the assignment. A questionnaire was used to assess patient acceptance. 126 patients participated. The average age was 7.7 years for spray, 7.1 for drops. RESULTS: Pain (higher number = more painful): means: 41/100 for spray; 35/100 for drops (P=0.28). No difference in cycloplegia noted (i.e., satisfactory in all subjects). Subjective acceptance: high in both patient groups, but a preference for spray was noted (P=0.06). No untoward drug reactions occurred with either method. CONCLUSIONS: Cycloplegic spray was as acceptable, or more acceptable than drops. Cycloplegia was comparable for the two methods. Spray application of cycloplegic drugs is a satisfactory route of topical administration for children.


Subject(s)
Ciliary Body/drug effects , Mydriatics/administration & dosage , Pupil/drug effects , Vision Tests/methods , Administration, Topical , Adolescent , Aerosols/administration & dosage , Child , Child, Preschool , Cyclopentolate/administration & dosage , Drug Combinations , Humans , Ophthalmic Solutions/administration & dosage , Pain Measurement , Patient Satisfaction , Propoxycaine/administration & dosage , Prospective Studies , Single-Blind Method , Tropicamide/administration & dosage
16.
Ophthalmology ; 106(10): 1951-6, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10519591

ABSTRACT

OBJECTIVE: Exotropia in infancy is believed to be associated with an increased prevalence of neurologic, ocular, and craniofacial abnormalities; however, the prevalence of coexisting ocular and systemic disease in these patients is unknown. In this study, the prevalence of ocular disease and systemic illness was determined in patients diagnosed with exotropia in infancy. DESIGN: Observational comparative case series. PARTICIPANTS: Medical records of 70 patients diagnosed with exotropia in the first year of life were reviewed and compared with records of 136 patients diagnosed with esotropia before 1 year of age. INTERVENTION: Patients with no disorders (other than latent nystagmus, dissociated vertical deviation, or oblique muscle overaction) were grouped as "simple" strabismus. Patients with systemic disorders (including prematurity, neurologic disease, and genetic disease) and patients with ocular disorders (including congenital nystagmus, other strabismus, ptosis, and any condition associated with loss of vision [except amblyopia]) were grouped as "complex" strabismus. MAIN OUTCOME MEASURES: Prevalence of coexisting systemic and ocular disorders. The demographics, strabismus measurements, and types of coexisting disease in the simple and complex groups were compared. RESULTS: A high percentage of both exotropia (67%) and esotropia (49%) patients had a coexisting ocular or systemic abnormality. Exotropia patients with a constant strabismus were more likely to have coexisting ocular or systemic disease than those with an intermittent strabismus. Smaller angles of exotropia or esotropia were associated with a higher likelihood of coexisting ocular or systemic diseases. Systemic disorders were found more frequently than ocular disorders in both the exotropia and esotropia groups. In 25% of all patients referred for evaluation of strabismus, an additional ocular or systemic abnormality was discovered by the ophthalmologist. CONCLUSION: Patients presenting to a university hospital-based practice in the first year of life with exotropia were more likely than those presenting with esotropia to have coexisting ocular and systemic disease. Both groups had a notably high prevalence of associated disorders. The percentages measured in this population may not be applicable to other practices because of referral bias. However, clinicians should consider that children presenting with infantile exotropia and esotropia appear to be at risk for coexisting ocular or systemic disease.


Subject(s)
Blepharoptosis/complications , Craniofacial Abnormalities/complications , Esotropia/complications , Exotropia/complications , Nervous System Diseases/complications , Nystagmus, Pathologic/complications , Baltimore/epidemiology , Blepharoptosis/epidemiology , Craniofacial Abnormalities/epidemiology , Female , Humans , Infant , Male , Nervous System Diseases/epidemiology , Nystagmus, Pathologic/congenital , Nystagmus, Pathologic/epidemiology , Prevalence
17.
J Opt Soc Am A Opt Image Sci Vis ; 16(9): 2103-11, 1999 Sep.
Article in English | MEDLINE | ID: mdl-10474891

ABSTRACT

Retinal birefringence scanning (RBS) is a new technique that is used to detect the fixation of the eye remotely and noninvasively. The method is based on analysis of polarization changes induced by the retina. In this study, the principles of RBS were mathematically modeled to facilitate a better understanding of the origins of the signals obtained. Stokes vector analysis and Mueller matrix multiplication were augmented with Poincaré sphere representation. The cornea was modeled as a linear retarder. The foveal area was modeled as a radially symmetric birefringent medium. The model accurately predicted the frequency and phase of RBS signals obtained during central and paracentral fixation. The signal that indicates central fixation during RBS likely results from a combination of the radial birefringence of the Henle fibers and the overlying corneal birefringence.


Subject(s)
Birefringence , Models, Biological , Retina/physiology , Forecasting , Humans , Light
18.
Genomics ; 59(3): 255-63, 1999 Aug 01.
Article in English | MEDLINE | ID: mdl-10444326

ABSTRACT

By screening the expressed sequence tag (EST) database, we identified transcripts of two new human genes that are polyadenylated within a long terminal repeat (LTR) of the HERV-H endogenous retrovirus family. The first gene, termed HHLA2, is represented by two EST clones and one cDNA clone, all of which have a polyadenylated LTR as their 3' end. The gene has an open reading frame (ORF) of 414 amino acids with three immunoglobulin-like domains and is expressed primarily in intestinal tissues, kidney, and lung. Seven small EST clones from several different tissues were found for the second gene, termed HHLA3. As with HHLA2, all HHLA3 ESTs utilized a HERV-H LTR as the polyadenylation signal. Three types of alternatively spliced HHLA3 transcripts that could encode proteins of 76, 121, or 153 amino acids were detected. Interestingly, the ORF for two of these transcripts continues into the LTR. For both HHLA2 and 3, no major human transcripts that utilized a non-LTR polyadenylation signal were detected. Analysis of RNA from baboon, which lacks the LTRs at these genomic loci, showed that the baboon HHLA2 and 3 genes use other polyadenylation signals. This study demonstrates that ancient retroviral insertions have assumed gene regulatory functions during the course of human evolution.


Subject(s)
Endogenous Retroviruses/genetics , Genes, Immunoglobulin , Immunoglobulins/genetics , Poly A , Amino Acid Sequence , Animals , Base Sequence , Cell Line , Cell Line, Transformed , DNA, Complementary , Expressed Sequence Tags , Gene Expression , Humans , Mice , Mice, Inbred C57BL , Molecular Sequence Data , Papio , Sequence Homology, Nucleic Acid , Terminal Repeat Sequences
19.
Plant Mol Biol ; 39(4): 721-8, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10350086

ABSTRACT

Sequences of three Arabidopsis thaliana and two Brassica napus cDNAs encoding squalene monooxygenase homologues (Sqp1 and Sqp2) are reported. Southern analysis confirmed that these cDNAs are derived from small gene families in both species. Expression analysis indicates that Sqp1 genes in B. napus are strongly expressed in leaves but not roots or developing seeds. Comparison of cDNA and genomic sequences indicate that the 3' splice site of an intron in these genes has undergone junctional sliding. The evolutionary significance of this phenomenon is discussed.


Subject(s)
Arabidopsis/genetics , Brassica/genetics , Genes, Plant , Oxygenases/genetics , Amino Acid Sequence , Animals , Arabidopsis/enzymology , Base Sequence , Brassica/enzymology , Candida/enzymology , DNA, Complementary , Humans , Introns , Mice , Molecular Sequence Data , Multigene Family , Oxygenases/biosynthesis , Oxygenases/chemistry , Phylogeny , Rats , Saccharomyces cerevisiae/enzymology , Sequence Alignment , Sequence Homology, Amino Acid , Species Specificity , Squalene Monooxygenase
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