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1.
Anal Biochem ; 484: 58-65, 2015 Sep 01.
Article in English | MEDLINE | ID: mdl-25981981

ABSTRACT

We have measured the optical properties of cancer and normal whole cells and lysates using light transmission spectroscopy (LTS). LTS provides both the optical extinction coefficient in the wavelength range from 220 to 1100nm and (by spectral inversion using a Mie model) the particle distribution density in the size range from 1 to 3000nm. Our current work involves whole cells and lysates of cultured human oral cells in liquid suspension. We found systematic differences in the optical extinction between cancer and normal whole cells and lysates, which translate to different particle size distributions (PSDs) for these materials. Specifically, we found that cancer cells have distinctly lower concentrations of nanoparticles with diameters less than 100nm and have higher concentrations of particles with diameters from 100 to 1000nm-results that hold for both whole cells and lysates. We also found a power-law dependence of particle density with diameter over several orders of magnitude.


Subject(s)
Light , Mouth Neoplasms/pathology , Nanoparticles , Optical Phenomena , Spectrum Analysis , Cell Line, Tumor , Humans , Keratinocytes/cytology , Keratinocytes/pathology , Nanoparticles/chemistry , Particle Size , Scattering, Radiation
2.
J R Soc Interface ; 10(78): 20120637, 2013 Jan 06.
Article in English | MEDLINE | ID: mdl-23015524

ABSTRACT

Early detection of invasive species is critical for effective biocontrol to mitigate potential ecological and economic damage. Laser transmission spectroscopy (LTS) is a powerful solution offering real-time, DNA-based species detection in the field. LTS can measure the size, shape and number of nanoparticles in a solution and was used here to detect size shifts resulting from hybridization of the polymerase chain reaction product to nanoparticles functionalized with species-specific oligonucleotide probes or with the species-specific oligonucleotide probes alone. We carried out a series of DNA detection experiments using the invasive freshwater quagga mussel (Dreissena bugensis) to evaluate the capability of the LTS platform for invasive species detection. Specifically, we tested LTS sensitivity to (i) DNA concentrations of a single target species, (ii) the presence of a target species within a mixed sample of other closely related species, (iii) species-specific functionalized nanoparticles versus species-specific oligonucleotide probes alone, and (iv) amplified DNA fragments versus unamplified genomic DNA. We demonstrate that LTS is a highly sensitive technique for rapid target species detection, with detection limits in the picomolar range, capable of successful identification in multispecies samples containing target and non-target species DNA. These results indicate that the LTS DNA detection platform will be useful for field application of target species. Additionally, we find that LTS detection is effective with species-specific oligonucleotide tags alone or when they are attached to polystyrene nanobeads and with both amplified and unamplified DNA, indicating that the technique may also have versatility for broader applications.


Subject(s)
Bivalvia/genetics , DNA/genetics , Nanoparticles/chemistry , Oligonucleotide Probes/chemistry , Sequence Analysis, DNA/methods , Animals , Microscopy, Confocal/methods , Polystyrenes/chemistry
3.
Phys Rev Lett ; 100(5): 056804, 2008 Feb 08.
Article in English | MEDLINE | ID: mdl-18352409

ABSTRACT

We have observed the BCS-like density of states predicted for energy-gap suppression by nonmagnetic Anderson impurities in superconductors. We show that Mn impurities in Al exhibit no magnetic character and act exclusively as strong resonant scattering sites without producing time-reverse symmetry breaking of Cooper pairs (pair breaking).

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