Revisiting hybrid breeding designs using genomic predictions: simulations highlight the superiority of incomplete factorials between segregating families over topcross designs.

KEY MESSAGE: Simulations showed that hybrid performances issued from an incomplete factorial between segregating families of two heterotic groups enable to calibrate genomic predictions of hybrid value more efficiently than tester-based designs. Genomic selection offers new opportunities to revisit hybrid breeding by replacing extensive phenotyping of hybrid combinations by genomic predictions. A key question remains to identify the best design to calibrate genomic prediction models. We proposed to use single-cross hybrids issued from an incomplete factorial design between segregating populations and compared this strategy with a conventional approach based on topcross evaluation. Two multiparental segregating populations of lines, each specific of one heterotic group, were simulated. Hybrids considered as training sets were generated using either (1) a parental line from the opposite group as tester or (2) following an incomplete factorial design. Different specific combining ability (SCA) proportions were simulated by considering different levels of group divergence and dominance effects for the simulated QTL. For the incomplete factorial design, for a same number of hybrids, we considered different numbers of parental lines and different contributions of lines (one to four) to calibration hybrids. We evaluated for different training set sizes prediction accuracies of new hybrids and genetic gains along three generations. At a given training set size, factorial design was as efficient (considering accuracy) as tester design in additive scenarios, but significantly outperformed tester design when SCA was present. The contribution number of each parental line to the incomplete factorial design had a small impact on accuracies. Our simulations confirmed experimental results and showed that calibrating models on hybrids between two multiparental populations is a cost-efficient way to perform genomic predictions in both groups, opening prospects for revisiting reciprocal recurrent selection schemes.

The amino-terminal region of SV40 large T antigen is sufficient to induce hepatic tumours in mice.

The transforming activity of SV40 large T-antigen (Tag) depends on its binding to cellular proteins involved in the control of the cell cycle (p53, pRb, p300..) and on the J-domain region in the amino-terminus. We established transgenic lines expressing wild-type or Tag mutant proteins lacking one of the three transforming domains, to determine the respective contributions of these domains to hepatic tumour formation. Tag mutants with no pRb-binding domain or N-terminal fragment did not cause neoplastic liver abnormalities. The d11137 Tag mutant protein, which inhibits pRb function without affecting p53, induced hepatic tumours. These tumours grew significantly faster than those induced by wild-type Tag. Our results demonstrate different requirements for each of the inactivating functions of SV40 Tag in hepatocyte transformation and show that the loss of p53 function has only a moderate effect on hepatic tumour formation.

Detection of serum antibodies against Leishmania 94 kDa antigen in visceral and cutaneous leishmaniosis due to Leishmania infantum.

Leishmania promastigotes polypeptides are analyzed by immunoblotting with sera from patients infected with different Leishmania species and presenting visceral or cutaneous infections. These sera recognize Leishmania polypeptides in several molecular masses. The major findings of this study are as follow. 1) The Leishmania 94 kDa antigen, which is specifically recognized by all sera from L. infantum-infected patients with visceral infection, is recognized by some sera from L. infantum-infected patients presenting cutaneous infection. 2) All patients with cutaneous infections due to L. tropica, L. amazonensis, or L. guyanensis do not develop anti-94 kDa antibodies, whatever the Leishmania species used as antigens. 3) Difference in electrophoretic mobilities is seen between the 94 kDa antigen identified by sera from Leishmania infantum-infected patients, and the antigen both recognized by the Concavalin A lectin and a rabbit antiserum raised against deglycosylated Promastigote Surface Protease.

Terpenoid Metabolism in Plastids : Localization of alpha-Tocopherol Synthesis in Capsicum Chromoplasts.

The synthesis of alpha-tocopherol from 2,3-dimethylphytylquinol and S-adenosyl-l-methionine was achieved using Capsicum annuum fruit chromoplasts. The enzymes involved in the cyclization (2,3-dimethyl-phytylquinol cyclase) and methylation (S-adenosyl methionine:gamma-tocopherol methyl-transferase) are both localized in the chromoplast membrane fraction (envelopes and/or a-chlorophyll lamellae), in contrast to the stroma fraction.