Structural elucidation of a compound extracted from Streptomyces Sp.NLKB45.

A Streptomyces Sp. NLKB45 was isolated from the Nellore coastal region. After checking antimicrobial and antifungal activity the strain was subjected to fermentation in starch casein broth medium. HPLC was used to purify the culture filtrate after it had been extracted with ethyl acetate. The extract showed antibacterial and anticancer properties. The extract was processed and the compound isolated was further analyzed using FTIR, mass spectroscopic method and one- and two-dimensional NMR techniques. Based on the data gathered the compound was identified as 7-((5-methylpyridin-2-ylamino) (phenyl) methyl) quinolin-8-ol with a weight-average molecular weight of about 341 Da.

Early Prediction of Lung Cancers Using Deep Saliency Capsule and Pre-Trained Deep Learning Frameworks.

Lung cancer is the cellular fission of abnormal cells inside the lungs that leads to 72% of total deaths worldwide. Lung cancer are also recognized to be one of the leading causes of mortality, with a chance of survival of only 19%. Tumors can be diagnosed using a variety of procedures, including X-rays, CT scans, biopsies, and PET-CT scans. From the above techniques, Computer Tomography (CT) scan technique is considered to be one of the most powerful tools for an early diagnosis of lung cancers. Recently, machine and deep learning algorithms have picked up peak energy, and this aids in building a strong diagnosis and prediction system using CT scan images. But achieving the best performances in diagnosis still remains on the darker side of the research. To solve this problem, this paper proposes novel saliency-based capsule networks for better segmentation and employs the optimized pre-trained transfer learning for the better prediction of lung cancers from the input CT images. The integration of capsule-based saliency segmentation leads to the reduction and eventually reduces the risk of computational complexity and overfitting problem. Additionally, hyperparameters of pretrained networks are tuned by the whale optimization algorithm to improve the prediction accuracy by sacrificing the complexity. The extensive experimentation carried out using the LUNA-16 and LIDC Lung Image datasets and various performance metrics such as accuracy, precision, recall, specificity, and F1-score are evaluated and analyzed. Experimental results demonstrate that the proposed framework has achieved the peak performance of 98.5% accuracy, 99.0% precision, 98.8% recall, and 99.1% F1-score and outperformed the DenseNet, AlexNet, Resnets-50, Resnets-100, VGG-16, and Inception models.

Synthesis and characterization of gold nanoparticles from marine Micrococcus sp. OUS9.

Studies on biological synthesis techniques of nanoparticles have been significantly expanded in recent years. This reduced adverse effects of chemical processing techniques. We describe the synthesis and characterization of gold nanoparticles from marine Micrococcus sp. OUS9 for potential application in nanobiotechnology.

Molecular docking analysis of two bioactive molecules KLUF10 and KLUF13 isolated from the marine bacteria Micrococcus sp. OUS9 with TNF alpha.

Tumor necrosis factor-alpha (TNF-α) is known to be linked with tumor. Therefore, it is of interest to document the Molecular docking analysis of two bioactive molecules KLUF10 and KLUF13 isolated from the marine bacteria Micrococcus sp. OUS9 with TNF alpha. We report the molecular interactions of KLUF10 and KLUF13 with TNF alpha.

Screening and identification of novel isolate Streptomyces sp., NLKPB45 from Nellore costal region for its biomedical applications.

Actinobacteria, which are the prolific producers of antibiotics and significant suppliers to the pharmaceutical industry, can produce a wide variety of bioactive metabolites. An actinomycete strain designated NLKPB45 was isolated from mangrove soils samples of Nellore coastal regions Andhra Pradesh and assessed for antibiotic production and activity against pathogenic bacteria. From a total of 9 mangrove soil samples, 143 acinomycetes were isolated. Among the isolated them 6 actinomycetes strains showed potential antibacterial activity against at two tested pathogens gram positive and gram negative bacteria E. coli and S. aureus. The potent strain NLKPB45 was identified by 16S gene isolation and sequencing to the Streptomyces genus. The ethyl acetate extracts also as shown excellent antimicrobial activity against Salmonella sp., staphylococcus aureus, E. coli, and B. subtilus were detected in both the supernatant extract samples from fermentations of culture NLKPB45. The anticancer activity of extracts in the HeLa with IC50 value of 37.1924 µg/ml, MCF-7 IC50 value of 40.9177 µg/ml and HT 29 IC50 value of 43.3758 µg/ml.

Morphological anatomy of accessory fissures in lungs.

BACKGROUND: Knowledge of the position and grade of accessory fissures and lobes is necessary for appreciation of lobar anatomy and thus locating bronchopulmonary segments. METHODS: Morphological variations of accessory fissures and lobes of the lungs were studied in 40 pairs of lungs from cadavers. RESULTS: Four left-sided lungs and two right-sided lungs showed accessory fissure in the lower lobe. Only one accessory fissure of left lung belongs to grade-ii and the remaining belongs to grade iii. [According to Craig and Walker's fissural classification] CONCLUSIONS: Awareness regarding accessory fissures and lobes is essential for performing lobectomies, segmental resection, for differential diagnosis and interpreting radiological images.

Intra-individual and intra-species heterogeneity in nuclear rDNA ITS region of Vigna species from subgenus Ceratotropis.

The extent of intra-individual and intra-species heterogeneity in the nuclear rDNA internal transcribed spacer (ITS) was investigated among the 'Asiatic Vigna' species (subgenus Ceratotropis). High intra- and inter-individual ITS polymorphism was observed among Vigna radiata accessions, where multiple ITS length variants ranging from approximately 700 to approximately 770 bp were detected on PCR amplification. Subsequent analysis revealed that the variants are 'heteroduplex ITS fragments' generated during the PCR process. Analysis of ITS from wild and cultivated forms of ten Vigna species from subgenus Ceratotropis revealed substantial intra-species divergence in four species: Vigna umbellata, Vigna trilobata, V. radiata and Vigna minima. However, no other species analysed showed intra-individual ITS heterogeneity as observed in V. radiata. The results demonstrate differential evolution of ITS sequence among wild and cultivated forms of V. radiata. Evidence indicates that intra-species hybridization and a slow 'molecular drive' are responsible for this phenomenon. Sequence analysis of 5.8S, ITS1 and ITS2 and secondary-structure analysis of ITS regions indicate that the ITS variants do not belong to pseudogenic rDNA repeat units. Further, reverse transcriptase-PCR (RT-PCR) analysis showed that rDNA repeat units harbouring certain intra-individual ITS variants were transcriptionally inactive, indicating the regulation of these loci by epigenetic gene silencing. The V. radiata ITS variants, when analysed together, did not cause any phylogenetic errors at the species level.

Evolutionarily conserved, DMRT1, encodes alternatively spliced transcripts and shows dimorphic expression during gonadal differentiation in the lizard, Calotes versicolor.

An orthologue of Dmrt1 has been cloned and characterized in the lizard, Calotes versicolor (CvDmrt1). CvDmrt1 encodes alternatively spliced transcripts in genital ridge during gonadal differentiation and in adult testis. Its expression in genital ridge initiates from day 3 and is restricted to mesenchymal cells, which differentiate into the Sertoli cells. Lack of expression in the coelomic epithelium of GR shows that CvDmrt1 expression occurs only in the testicular pathway, and that the Sertoli and granulosa cells in GR may originate from different primordia. From day 25 onwards, the expression shifts majorly towards the germ cells both in testis and ovary. Thus its role in sexual differentiation of C. versicolor, which lacks CSD and TSD, is well documented.

Evolutionarily conserved, DMRT1, encodes alternatively spliced transcripts and shows dimorphic expression during gonadal differentiation in the lizard, Calotes versicolor.

An orthologue of Dmrt1 has been cloned and characterized in the lizard, Calotes versicolor (CvDmrt1). CvDmrt1 encodes alternatively spliced transcripts in genital ridge during gonadal differentiation and in adult testis. Its expression in genital ridge initiates from day 3 and is restricted to mesenchymal cells, which differentiate into the Sertoli cells. Lack of expression in the coelomic epithelium of GR shows that CvDmrt1 expression occurs only in the testicular pathway, and that the Sertoli and granulosa cells in GR may originate from different primordia. From day 25 onwards, the expression shifts majorly towards the germ cells both in testis and ovary. Thus its role in sexual differentiation of C. versicolor, which lacks CSD and TSD, is well documented.