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1.
Plant Cell Rep ; 43(6): 159, 2024 Jun 01.
Article in English | MEDLINE | ID: mdl-38822842

ABSTRACT

KEY MESSAGE: AcEXPA1, an aluminum (Al)-inducible expansin gene, is demonstrated to be involved in carpetgrass (Axonopus compressus) root elongation under Al toxicity through analyzing composite carpetgrass plants overexpressing AcEXPA1. Aluminum (Al) toxicity is a major mineral toxicity that limits plant productivity in acidic soils by inhibiting root growth. Carpetgrass (Axonopus compressus), a dominant warm-season turfgrass widely grown in acidic tropical soils, exhibits superior adaptability to Al toxicity. However, the mechanisms underlying its Al tolerance are largely unclear, and knowledge of the functional genes involved in Al detoxification in this turfgrass is limited. In this study, phenotypic variation in Al tolerance, as indicated by relative root elongation, was observed among seventeen carpetgrass genotypes. Al-responsive genes related to cell wall modification were identified in the roots of the Al-tolerant genotype 'A58' via transcriptome analysis. Among them, a gene encoding α-expansin was cloned and designated AcEXPA1 for functional characterization. Observed Al dose effects and temporal responses revealed that Al induced AcEXPA1 expression in carpetgrass roots. Subsequently, an efficient and convenient Agrobacterium rhizogenes-mediated transformation method was established to generate composite carpetgrass plants with transgenic hairy roots for investigating AcEXPA1 involvement in carpetgrass root growth under Al toxicity. AcEXPA1 was successfully overexpressed in the transgenic hairy roots, and AcEXPA1 overexpression enhanced Al tolerance in composite carpetgrass plants through a decrease in Al-induced root growth inhibition. Taken together, these findings suggest that AcEXPA1 contributes to Al tolerance in carpetgrass via root growth regulation.


Subject(s)
Aluminum , Gene Expression Regulation, Plant , Plant Proteins , Plant Roots , Plants, Genetically Modified , Aluminum/toxicity , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/drug effects , Gene Expression Regulation, Plant/drug effects , Plant Proteins/genetics , Plant Proteins/metabolism , Adaptation, Physiological/genetics , Adaptation, Physiological/drug effects , Poaceae/genetics , Poaceae/drug effects
2.
Plant Cell Rep ; 43(6): 160, 2024 Jun 03.
Article in English | MEDLINE | ID: mdl-38825616

ABSTRACT

KEY MESSAGE: LeBAHD56 is preferentially expressed in tissues where shikonin and its derivatives are biosynthesized, and it confers shikonin acylation in vivo. Two WRKY transcriptional factors might regulate LeBAHD56's expression. Shikonin and its derivatives, found in the roots of Lithospermum erythrorhizon, have extensive application in the field of medicine, cosmetics, and other industries. Prior research has demonstrated that LeBAHD1(LeSAT1) is responsible for the biochemical process of shikonin acylation both in vitro and in vivo. However, with the exception of its documented in vitro biochemical function, there is no in vivo genetic evidence supporting the acylation function of the highly homologous gene of LeSAT1, LeBAHD56(LeSAT2), apart from its reported role. Here, we validated the critical acylation function of LeBAHD56 for shikonin using overexpression (OE) and CRISPR/Cas9-based knockout (KO) strategies. The results showed that the OE lines had a significantly higher ratio of acetylshikonin, isobutyrylshikonin or isovalerylshikonin to shikonin than the control. In contrast, the KO lines had a significantly lower ratio of acetylshikonin, isobutyrylshikonin or isovalerylshikonin to shikonin than controls. As for its detailed expression patterns, we found that LeBAHD56 is preferentially expressed in roots and callus cells, which are the biosynthesis sites for shikonin and its derivatives. In addition, we anticipated that a wide range of putative transcription factors might control its transcription and verified the direct binding of two crucial WRKY members to the LeBAHD56 promoter's W-box. Our results not only confirmed the in vivo function of LeBAHD56 in shikonin acylation, but also shed light on its transcriptional regulation.


Subject(s)
Gene Expression Regulation, Plant , Lithospermum , Naphthoquinones , Plant Proteins , Plants, Genetically Modified , Naphthoquinones/metabolism , Lithospermum/genetics , Lithospermum/metabolism , Acylation , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Roots/genetics , Plant Roots/metabolism , Transcription Factors/metabolism , Transcription Factors/genetics , CRISPR-Cas Systems , Anthraquinones
3.
Physiol Plant ; 176(3): e14356, 2024.
Article in English | MEDLINE | ID: mdl-38828569

ABSTRACT

Halophyte Halogeton glomeratus mostly grows in saline desert areas in arid and semi-arid regions and is able to adapt to adverse conditions such as salinity and drought. Earlier transcriptomic studies revealed activation of the HgS2 gene in the leaf of H. glomeratus seedlings when exposed to saline conditions. To identify the properties of HgS2 in H. glomeratus, we used yeast transformation and overexpression in Arabidopsis. Yeast cells genetically transformed with HgS2 exhibited K+ uptake and Na+ efflux compared with control (empty vector). Stable overexpression of HgS2 in Arabidopsis improved its resistance to salt stress and led to a notable rise in seed germination in salinity conditions compared to the wild type (WT). Transgenic Arabidopsis regulated ion homeostasis in plant cells by increasing Na+ absorption and decreasing K+ efflux in leaves, while reducing Na+ absorption and K+ efflux in roots. In addition, overexpression of HgS2 altered transcription levels of stress response genes and regulated different metabolic pathways in roots and leaves of Arabidopsis. These results offer new insights into the role of HgS2 in plants' salt tolerance.


Subject(s)
Arabidopsis , Gene Expression Regulation, Plant , Plant Proteins , Plants, Genetically Modified , Potassium , Salt Tolerance , Salt-Tolerant Plants , Sodium , Arabidopsis/genetics , Arabidopsis/physiology , Salt Tolerance/genetics , Salt-Tolerant Plants/genetics , Salt-Tolerant Plants/physiology , Salt-Tolerant Plants/metabolism , Sodium/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Potassium/metabolism , Plant Leaves/genetics , Plant Leaves/physiology , Plant Leaves/metabolism , Plant Roots/genetics , Plant Roots/physiology , Plant Roots/metabolism , Sodium Chloride/pharmacology , Germination/genetics , Germination/drug effects , Amaranthaceae/genetics , Amaranthaceae/physiology
4.
Plant Cell Rep ; 43(6): 158, 2024 Jun 01.
Article in English | MEDLINE | ID: mdl-38822833

ABSTRACT

KEY MESSAGE: Transgenic plants stably overexpressing ScOPR1 gene enhanced disease resistance by increasing the accumulation of JA, SA, and GST, as well as up-regulating the expression of genes related to signaling pathways. 12-Oxo-phytodienoate reductase (OPR) is an oxidoreductase that depends on flavin mononucleotide (FMN) and catalyzes the conversion of 12-oxophytodienoate (12-OPDA) into jasmonic acid (JA). It plays a key role in plant growth and development, and resistance to adverse stresses. In our previous study, we have obtained an OPR gene (ScOPR1, GenBank Accession Number: MG755745) from sugarcane. This gene showed positive responses to methyl jasmonate (MeJA), salicylic acid (SA), abscisic acid (ABA), and Sporisorium scitamineum, suggesting its potential for pathogen resistance. Here, in our study, we observed that Nicotiana benthamiana leaves transiently overexpressing ScOPR1 exhibited weaker disease symptoms, darker 3,3-diaminobenzidine (DAB) staining, higher accumulation of reactive oxygen species (ROS), and higher expression of hypersensitive response (HR) and SA pathway-related genes after inoculation with Ralstonia solanacearum and Fusarium solanacearum var. coeruleum. Furthermore, the transgenic N. benthamiana plants stably overexpressing the ScOPR1 gene showed enhanced resistance to pathogen infection by increasing the accumulation of JA, SA, and glutathione S-transferase (GST), as well as up-regulating genes related to HR, JA, SA, and ROS signaling pathways. Transcriptome analysis revealed that the specific differentially expressed genes (DEGs) in ScOPR1-OE were significantly enriched in hormone transduction signaling and plant-pathogen interaction pathways. Finally, a functional mechanism model of the ScOPR1 gene in response to pathogen infection was depicted. This study provides insights into the molecular mechanism of ScOPR1 and presents compelling evidence supporting its positive involvement in enhancing plant disease resistance.


Subject(s)
Cyclopentanes , Disease Resistance , Gene Expression Regulation, Plant , Oxylipins , Plant Diseases , Plant Growth Regulators , Plant Proteins , Plants, Genetically Modified , Saccharum , Salicylic Acid , Signal Transduction , Disease Resistance/genetics , Plant Diseases/microbiology , Plant Diseases/genetics , Saccharum/genetics , Saccharum/microbiology , Signal Transduction/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Growth Regulators/metabolism , Oxylipins/metabolism , Salicylic Acid/metabolism , Cyclopentanes/metabolism , Nicotiana/genetics , Nicotiana/microbiology , Reactive Oxygen Species/metabolism , Acetates/pharmacology , Plant Leaves/genetics , Plant Leaves/microbiology , Abscisic Acid/metabolism , Ralstonia solanacearum/physiology , Ralstonia solanacearum/pathogenicity
5.
Physiol Plant ; 176(3): e14375, 2024.
Article in English | MEDLINE | ID: mdl-38837224

ABSTRACT

MicroRNA(miRNA) is a class of non-coding small RNA that plays an important role in plant growth, development, and response to environmental stresses. Unlike most miRNAs, which usually target homologous genes across a variety of species, miR827 targets different types of genes in different species. Research on miR827 mainly focuses on its role in regulating phosphate (Pi) homeostasis of plants, however, little is known about its function in plant response to virus infection. In the present study, miR827 was significantly upregulated in the recovery tissue of virus-infected Nicotiana tabacum. Overexpression of miR827 could improve plants resistance to the infection of chilli veinal mottle virus (ChiVMV) in Nicotiana benthamiana, whereas interference of miR827 increased the susceptibility of the virus-infected plants. Further experiments indicated that the antiviral defence regulated by miR827 was associated with the reactive oxygen species and salicylic acid signalling pathways. Then, fructose-1,6-bisphosphatase (FBPase) was identified to be a target of miR827, and virus infection could affect the expression of FBPase. Finally, transient expression of FBPase increased the susceptibility to ChiVMV-GFP infection in N. benthamiana. By contrast, silencing of FBPase increased plant resistance. Taken together, our results demonstrate that miR827 plays a positive role in tobacco response to virus infection, thus providing new insights into understanding the role of miR827 in plant-virus interaction.


Subject(s)
Disease Resistance , Gene Expression Regulation, Plant , MicroRNAs , Nicotiana , Plant Diseases , Nicotiana/virology , Nicotiana/genetics , MicroRNAs/genetics , MicroRNAs/metabolism , Plant Diseases/virology , Plant Diseases/genetics , Plant Diseases/immunology , Disease Resistance/genetics , Fructose-Bisphosphatase/genetics , Fructose-Bisphosphatase/metabolism , Salicylic Acid/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Reactive Oxygen Species/metabolism , Tobamovirus/physiology , Tobamovirus/genetics , Plants, Genetically Modified
6.
Physiol Plant ; 176(3): e14364, 2024.
Article in English | MEDLINE | ID: mdl-38837226

ABSTRACT

Phytoremediation is a promising technology for removing the high-toxic explosive 2,4,6-trinitrotoluene (TNT) pollutant from the environment. Mining dominant genes is the key research direction of this technology. Most previous studies have focused on the detoxification of TNT rather than plants' TNT tolerance. Here, we conducted a transcriptomic analysis of wild type Arabidopsis plants under TNT stress and found that the Arabidopsis cytochrome P450 gene CYP81D11 was significantly induced in TNT-treated plants. Under TNT stress, the root length was approximately 1.4 times longer in CYP81D11-overexpressing transgenic plants than in wild type plants. The half-removal time for TNT was much shorter in CYP81D11-overexpressing transgenic plants (1.1 days) than in wild type plants (t1/2 = 2.2 day). In addition, metabolic analysis showed no difference in metabolites in transgenic plants compared to wild type plants. These results suggest that the high TNT uptake rates of CYP81D11-overexpressing transgenic plants were most likely due to increased tolerance and biomass rather than TNT degradation. However, CYP81D11-overexpressing plants were not more tolerant to osmotic stresses, such as salt or drought. Taken together, our results indicate that CYP81D11 is a promising target for producing bioengineered plants with high TNT removing capability.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Biodegradation, Environmental , Cytochrome P-450 Enzyme System , Gene Expression Regulation, Plant , Plants, Genetically Modified , Trinitrotoluene , Arabidopsis/genetics , Arabidopsis/metabolism , Trinitrotoluene/metabolism , Cytochrome P-450 Enzyme System/metabolism , Cytochrome P-450 Enzyme System/genetics , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Plant Roots/genetics , Plant Roots/metabolism , Stress, Physiological/genetics
7.
Physiol Plant ; 176(3): e14374, 2024.
Article in English | MEDLINE | ID: mdl-38837422

ABSTRACT

Heat stress substantially reduces tomato (Solanum lycopersicum) growth and yield globally, thereby jeopardizing food security. DnaJ proteins, constituents of the heat shock protein system, protect cells from diverse environmental stresses as HSP-70 molecular co-chaperones. In this study, we demonstrated that AdDjSKI, a serine-rich DnaJ III protein induced by pathogens, plays an important role in stabilizing photosystem II (PSII) in response to heat stress. Our results revealed that transplastomic tomato plants expressing the AdDjSKI gene exhibited increased levels of total soluble proteins, improved growth and chlorophyll content, reduced malondialdehyde (MDA) accumulation, and diminished PSII photoinhibition under elevated temperatures when compared with wild-type (WT) plants. Intriguingly, these transplastomic plants maintained higher levels of D1 protein under elevated temperatures compared with the WT plants, suggesting that overexpression of AdDjSKI in plastids is crucial for PSII protection, likely due to its chaperone activity. Furthermore, the transplastomic plants displayed lower accumulation of superoxide radical (O2 •─) and H2O2, in comparison with the WT plants, plausibly attributed to higher superoxide dismutase (SOD) and ascorbate peroxidase (APX) activities. This also coincides with an enhanced expression of corresponding genes, including SlCuZnSOD, SlFeSOD, SlAPX2, and SltAPX, under heat stress. Taken together, our findings reveal that chloroplastic expression of AdDjSKI in tomatoes plays a critical role in fruit yield, primarily through a combination of delayed senescence and stabilizing PSII under heat stress.


Subject(s)
Fruit , Heat-Shock Response , Photosystem II Protein Complex , Plant Leaves , Plant Proteins , Plastids , Solanum lycopersicum , Solanum lycopersicum/genetics , Solanum lycopersicum/physiology , Solanum lycopersicum/growth & development , Solanum lycopersicum/metabolism , Photosystem II Protein Complex/metabolism , Photosystem II Protein Complex/genetics , Heat-Shock Response/genetics , Fruit/genetics , Fruit/growth & development , Fruit/physiology , Fruit/metabolism , Plant Proteins/metabolism , Plant Proteins/genetics , Plant Leaves/genetics , Plant Leaves/physiology , Plant Leaves/metabolism , Plastids/metabolism , Plastids/genetics , Chlorophyll/metabolism , HSP40 Heat-Shock Proteins/metabolism , HSP40 Heat-Shock Proteins/genetics , Plants, Genetically Modified , Plant Senescence/genetics , Gene Expression Regulation, Plant , Malondialdehyde/metabolism
8.
Plant Mol Biol ; 114(3): 69, 2024 Jun 06.
Article in English | MEDLINE | ID: mdl-38842584

ABSTRACT

Petunias are renowned ornamental species widely cultivated as pot plants for their aesthetic appeal both indoors and outdoors. The preference for pot plants depends on their compact growth habit and abundant flowering. While genome editing has gained significant popularity in many crop plants in addressing growth and development and abiotic and biotic stress factors, relatively less emphasis has been placed on its application in ornamental plant species. Genome editing in ornamental plants opens up possibilities for enhancing their aesthetic qualities, offering innovative opportunities for manipulating plant architecture and visual appeal through precise genetic modifications. In this study, we aimed to optimize the procedure for an efficient genome editing system in petunia plants using the highly efficient multiplexed CRISPR/Cas9 system. Specifically, we targeted a total of six genes in Petunia which are associated with plant architecture traits, two paralogous of FLOWERING LOCUS T (PhFT) and four TERMINAL FLOWER-LIKE1 (PhTFL1) paralogous genes separately in two constructs. We successfully induced homogeneous and heterogeneous indels in the targeted genes through precise genome editing, resulting in significant phenotypic alterations in petunia. Notably, the plants harboring edited PhTFL1 and PhFT exhibited a conspicuously early flowering time in comparison to the wild-type counterparts. Furthermore, mutants with alterations in the PhTFL1 demonstrated shorter internodes than wild-type, likely by downregulating the gibberellic acid pathway genes PhGAI, creating a more compact and aesthetically appealing phenotype. This study represents the first successful endeavor to produce compact petunia plants with increased flower abundance through genome editing. Our approach holds immense promise to improve economically important potting plants like petunia and serve as a potential foundation for further improvements in similar ornamental plant species.


Subject(s)
CRISPR-Cas Systems , Flowers , Gene Editing , Petunia , Plant Proteins , Plants, Genetically Modified , Petunia/genetics , Petunia/growth & development , Flowers/genetics , Flowers/growth & development , Gene Editing/methods , Plant Proteins/genetics , Plant Proteins/metabolism , Mutagenesis , Gene Expression Regulation, Plant , Phenotype
9.
Plant Mol Biol ; 114(3): 70, 2024 Jun 06.
Article in English | MEDLINE | ID: mdl-38842600

ABSTRACT

Melon (Cucumis melo L.) is an important horticultural and economic crop. ETHYLENE RESPONSE FACTOR1 (ERF1) plays an important role in regulating plant development, and the resistance to multiple biotic and abiotic stresses. In this study, developmental biology, molecular biology and biochemical assays were performed to explore the biological function of CmERF1 in melon. Abundant transcripts of CmERF1 were found in ovary at green-yellow bud (GYB) and rapid enlargement (ORE) stages. In CmERF1 promoter, the cis-regulatory elements for indoleacetic acid (IAA), methyl jasmonate (MeJA), salicylic acid (SA), abscisic acid (ABA), gibberellic acid (GA), light and low temperature responses were found. CmERF1 could be significantly induced by ethylene, IAA, MeJA, SA, ABA, and respond to continuous light and low temperature stresses in melon. Ectopic expression of CmERF1 increased the length of siliqua and carpopodium, and expanded the size of leaves in Arabidopsis. Knockdown of CmERF1 led to smaller ovary at anthesis, mature fruit and leaves in melon. In CmERF1-RNAi #2 plants, 75 genes were differently expressed compared with control, and the promoter regions of 28 differential expression genes (DEGs) contained the GCC-box (AGCCGCC) or DRE (A/GCCGAC) cis-acting elements of CmERF1. A homolog of cell division cycle protein 48 (CmCDC48) was proved to be the direct target of CmERF1 by the yeast one-hybrid assay and dual-luciferase (LUC) reporter (DLR) system. These results indicated that CmERF1 was able to promote the growth of fruits and leaves, and involved in multiple hormones and environmental signaling pathways in melon.


Subject(s)
Cucumis melo , Cyclopentanes , Fruit , Gene Expression Regulation, Plant , Plant Growth Regulators , Plant Leaves , Plant Proteins , Plants, Genetically Modified , Cucumis melo/genetics , Cucumis melo/growth & development , Cucumis melo/metabolism , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Leaves/growth & development , Plant Leaves/drug effects , Plant Proteins/genetics , Plant Proteins/metabolism , Plant Growth Regulators/metabolism , Plant Growth Regulators/pharmacology , Fruit/genetics , Fruit/growth & development , Fruit/metabolism , Cyclopentanes/pharmacology , Cyclopentanes/metabolism , Promoter Regions, Genetic , Oxylipins/pharmacology , Oxylipins/metabolism , Abscisic Acid/metabolism , Abscisic Acid/pharmacology , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Indoleacetic Acids/metabolism , Acetates/pharmacology , Salicylic Acid/metabolism , Salicylic Acid/pharmacology
11.
Planta ; 260(1): 18, 2024 Jun 05.
Article in English | MEDLINE | ID: mdl-38837044

ABSTRACT

MAIN CONCLUSION: We have developed and optimized a rapid, versatile Agrobacterium-mediated transient expression system for cannabis seedlings that can be used in functional genomics studies of both hemp-type and drug-type cannabis. Cannabis (Cannabis sativa L.) holds great promise in the medical and food industries due to its diverse chemical composition, including specialized cannabinoids. However, the study of key genes involved in various biological processes, including secondary metabolite biosynthesis, has been hampered by the lack of efficient in vivo functional analysis methods. Here, we present a novel, short-cycle, high-efficiency transformation method for cannabis seedlings using Agrobacterium tumefaciens. We used the RUBY reporter system to monitor transformation results without the need for chemical treatments or specialized equipment. Four strains of A. tumefaciens (GV3101, EHA105, LBA4404, and AGL1) were evaluated for transformation efficiency, with LBA4404 and AGL1 showing superior performance. The versatility of the system was further demonstrated by successful transformation with GFP and GUS reporter genes. In addition, syringe infiltration was explored as an alternative to vacuum infiltration, offering simplicity and efficiency for high-throughput applications. Our method allows rapid and efficient in vivo transformation of cannabis seedlings, facilitating large-scale protein expression and high-throughput characterization studies.


Subject(s)
Agrobacterium tumefaciens , Cannabis , Genomics , Seedlings , Transformation, Genetic , Agrobacterium tumefaciens/genetics , Seedlings/genetics , Genomics/methods , Cannabis/genetics , Cannabis/metabolism , Plants, Genetically Modified , Genes, Reporter , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism
12.
Plant Cell Rep ; 43(6): 162, 2024 Jun 05.
Article in English | MEDLINE | ID: mdl-38837057

ABSTRACT

KEY MESSAGE: A robust agroinfiltration-mediated transient gene expression method for soybean leaves was developed. Plant genotype, developmental stage and leaf age, surfactant, and Agrobacterium culture conditions are important for successful agroinfiltration. Agroinfiltration of Nicotiana benthamiana has emerged as a workhorse transient assay for plant biotechnology and synthetic biology to test the performance of gene constructs in dicot leaves. While effective, it is nonetheless often desirable to assay transgene constructs directly in crop species. To that end, we innovated a substantially robust agroinfiltration method for Glycine max (soybean), the most widely grown dicot crop plant in the world. Several factors were found to be relevant to successful soybean leaf agroinfiltration, including genotype, surfactant, developmental stage, and Agrobacterium strain and culture medium. Our optimized protocol involved a multi-step Agrobacterium culturing process with appropriate expression vectors, Silwet L-77 as the surfactant, selection of fully expanded leaves in the VC or V1 stage of growth, and 5 min of vacuum at - 85 kPa followed by a dark incubation period before plants were returned to normal growth conditions. Using this method, young soybean leaves of two lines-V17-0799DT, and TN16-5004-were high expressors for GUS, two co-expressed fluorescent protein genes, and the RUBY reporter product, betalain. This work not only represents a new research tool for soybean biotechnology, but also indicates critical parameters for guiding agroinfiltration optimization for other crop species. We speculate that leaf developmental stage might be the most critical factor for successful agroinfiltration.


Subject(s)
Agrobacterium , Glycine max , Plant Leaves , Plants, Genetically Modified , Glycine max/genetics , Glycine max/microbiology , Glycine max/growth & development , Plant Leaves/genetics , Plant Leaves/metabolism , Agrobacterium/genetics , Gene Expression Regulation, Plant , Nicotiana/genetics , Genetic Vectors/genetics
13.
Planta ; 260(1): 16, 2024 Jun 04.
Article in English | MEDLINE | ID: mdl-38833022

ABSTRACT

MAIN CONCLUSION: A callus-specific CRISPR/Cas9 (CSC) system with Cas9 gene driven by the promoters of ZmCTA1 and ZmPLTP reduces somatic mutations and improves the production of heritable mutations in maize. The CRISPR/Cas9 system, due to its editing accuracy, provides an excellent tool for crop genetic breeding. Nevertheless, the traditional design utilizing CRISPR/Cas9 with ubiquitous expression leads to an abundance of somatic mutations, thereby complicating the detection of heritable mutations. We constructed a callus-specific CRISPR/Cas9 (CSC) system using callus-specific promoters of maize Chitinase A1 and Phospholipid transferase protein (pZmCTA1 and pZmPLTP) to drive Cas9 expression, and the target gene chosen for this study was the bZIP transcription factor Opaque2 (O2). The CRISPR/Cas9 system driven by the maize Ubiquitin promoter (pZmUbi) was employed as a comparative control. Editing efficiency analysis based on high-throughput tracking of mutations (Hi-TOM) showed that the CSC systems generated more target gene mutations than the ubiquitously expressed CRISPR/Cas9 (UC) system in calli. Transgenic plants were generated for the CSC and UC systems. We found that the CSC systems generated fewer target gene mutations than the UC system in the T0 seedlings but reduced the influence of somatic mutations. Nearly 100% of mutations in the T1 generation generated by the CSC systems were derived from the T0 plants. Only 6.3-16.7% of T1 mutations generated by the UC system were from the T0 generation. Our results demonstrated that the CSC system consistently produced more stable, heritable mutants in the subsequent generation, suggesting its potential application across various crops to facilitate the genetic breeding of desired mutations.


Subject(s)
CRISPR-Cas Systems , Gene Editing , Mutation , Plants, Genetically Modified , Zea mays , Zea mays/genetics , Plants, Genetically Modified/genetics , Gene Editing/methods , Promoter Regions, Genetic/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism , Basic-Leucine Zipper Transcription Factors/genetics , Basic-Leucine Zipper Transcription Factors/metabolism , DNA-Binding Proteins
14.
Plant Signal Behav ; 19(1): 2362518, 2024 Dec 31.
Article in English | MEDLINE | ID: mdl-38836385

ABSTRACT

Cotton is an important agricultural crop to many regions across the globe but is sensitive to low-temperature exposure. The activity of the enzyme SENSITIVE TO FREEZING 2 (SFR2) improves cold tolerance of plants and produces trigalactosylsyldiacylglycerol (TGDG), but its role in cold sensitive plants, such as cotton remains unknown. Recently, it was reported that cotton SFR2 produced very little TGDG under normal and cold conditions. Here, we investigate cotton SFR2 activation and TGDG production. Using multiple approaches in the native system and transformation into Arabidopsis thaliana, as well as heterologous yeast expression, we provide evidence that cotton SFR2 activates differently than previously found among other plant species. We conclude with the hypothesis that SFR2 in cotton is not activated in a similar manner regarding acidification or freezing like Arabidopsis and that other regions of SFR2 protein are critical for activation of the enzyme than previously reported.


Subject(s)
Arabidopsis , Cold Temperature , Gossypium , Gossypium/genetics , Gossypium/metabolism , Gossypium/physiology , Arabidopsis/genetics , Arabidopsis/physiology , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Plant Proteins/metabolism , Plant Proteins/genetics , Stress, Physiological , Cold-Shock Response/physiology , Gene Expression Regulation, Plant , Plants, Genetically Modified
15.
Nat Commun ; 15(1): 4796, 2024 Jun 05.
Article in English | MEDLINE | ID: mdl-38839783

ABSTRACT

Powdery mildew is a devastating disease that affects wheat yield and quality. Wheat wild relatives represent valuable sources of disease resistance genes. Cloning and characterization of these genes will facilitate their incorporation into wheat breeding programs. Here, we report the cloning of Pm57, a wheat powdery mildew resistance gene from Aegilops searsii. It encodes a tandem kinase protein with putative kinase-pseudokinase domains followed by a von Willebrand factor A domain (WTK-vWA), being ortholog of Lr9 that mediates wheat leaf rust resistance. The resistance function of Pm57 is validated via independent mutants, gene silencing, and transgenic assays. Stable Pm57 transgenic wheat lines and introgression lines exhibit high levels of all-stage resistance to diverse isolates of the Bgt fungus, and no negative impacts on agronomic parameters are observed in our experimental set-up. Our findings highlight the emerging role of kinase fusion proteins in plant disease resistance and provide a valuable gene for wheat breeding.


Subject(s)
Aegilops , Ascomycota , Disease Resistance , Plant Diseases , Plant Proteins , Plants, Genetically Modified , Triticum , Triticum/microbiology , Triticum/genetics , Disease Resistance/genetics , Plant Diseases/microbiology , Plant Diseases/genetics , Plant Diseases/immunology , Ascomycota/genetics , Ascomycota/pathogenicity , Plant Proteins/genetics , Plant Proteins/metabolism , Aegilops/genetics , Aegilops/microbiology , Plant Breeding , Protein Kinases/genetics , Protein Kinases/metabolism , Cloning, Molecular , Gene Expression Regulation, Plant
16.
PeerJ ; 12: e17466, 2024.
Article in English | MEDLINE | ID: mdl-38827284

ABSTRACT

Background: Tomato (Solanum lycopersicum) is an annual or perennial herb that occupies an important position in daily agricultural production. It is an essential food crop for humans and its ripening process is regulated by a number of genes. S-adenosyl-l-homocysteine hydrolase (AdoHcyase, EC 3.3.1.1) is widespread in organisms and plays an important role in regulating biological methylation reactions. Previous studies have revealed that transgenic tomato that over-express SlSAHH2 ripen earlier than the wild-type (WT). However, the differences in metabolites and the mechanisms driving how these differences affect the ripening cycle are unclear. Objective: To investigate the effects of SlSAHH2 on metabolites in over-expressed tomato and WT tomato. Methods: SlSAHH2 over-expressed tomato fruit (OE-5# and OE-6#) and WT tomato fruit at the breaker stage (Br) were selected for non-targeted metabolome analysis. Results: A total of 733 metabolites were identified by mass spectrometry using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database and the Human Metabolome database (HMDB). The metabolites were divided into 12 categories based on the superclass results and a comparison with the HMDB. The differences between the two databases were analyzed by PLS-DA. Based on a variable important in projection value >1 and P < 0.05, 103 differential metabolites were found between tomato variety OE-5# and WT and 63 differential metabolites were found between OE-6# and WT. These included dehydrotomatine, L-serine, and gallic acid amongst others. Many metabolites are associated with fruit ripening and eight common metabolites were found between the OE-5# vs. WT and OE-6# vs. WT comparison groups. The low L-tryptophan expression in OE-5# and OE-6# is consistent with previous reports that its content decreases with fruit ripening. A KEGG pathway enrichment analysis of the significantly different metabolites revealed that in the OE-5# and WT groups, up-regulated metabolites were enriched in 23 metabolic pathways and down-regulated metabolites were enriched in 11 metabolic pathways. In the OE-6# and WT groups, up-regulated metabolites were enriched in 29 pathways and down-regulated metabolites were enriched in six metabolic pathways. In addition, the differential metabolite changes in the L-serine to flavonoid transformation metabolic pathway also provide evidence that there is a phenotypic explanation for the changes in transgenic tomato. Discussion: The metabolomic mechanism controlling SlSAHH2 promotion of tomato fruit ripening has been further elucidated.


Subject(s)
Fruit , Solanum lycopersicum , Solanum lycopersicum/metabolism , Solanum lycopersicum/genetics , Fruit/metabolism , Fruit/genetics , Plants, Genetically Modified/genetics , Gene Expression Regulation, Plant , Plant Proteins/genetics , Plant Proteins/metabolism , Adenosylhomocysteinase/metabolism , Adenosylhomocysteinase/genetics , Metabolome , Metabolomics
17.
BMC Biotechnol ; 24(1): 37, 2024 Jun 03.
Article in English | MEDLINE | ID: mdl-38825715

ABSTRACT

BACKGROUND: As part of a publicly funded initiative to develop genetically engineered Brassicas (cabbage, cauliflower, and canola) expressing Bacillus thuringiensis Crystal (Cry)-encoded insecticidal (Bt) toxin for Indian and Australian farmers, we designed several constructs that drive high-level expression of modified Cry1B and Cry1C genes (referred to as Cry1BM and Cry1CM; with M indicating modified). The two main motivations for modifying the DNA sequences of these genes were to minimise any licensing cost associated with the commercial cultivation of transgenic crop plants expressing CryM genes, and to remove or alter sequences that might adversely affect their activity in plants. RESULTS: To assess the insecticidal efficacy of the Cry1BM/Cry1CM genes, constructs were introduced into the model Brassica Arabidopsis thaliana in which Cry1BM/Cry1CM expression was directed from either single (S4/S7) or double (S4S4/S7S7) subterranean clover stunt virus (SCSV) promoters. The resulting transgenic plants displayed a high-level of Cry1BM/Cry1CM expression. Protein accumulation for Cry1CM ranged from 5.18 to 176.88 µg Cry1CM/g dry weight of leaves. Contrary to previous work on stunt promoters, we found no correlation between the use of either single or double stunt promoters and the expression levels of Cry1BM/Cry1CM genes, with a similar range of Cry1CM transcript abundance and protein content observed from both constructs. First instar Diamondback moth (Plutella xylostella) larvae fed on transgenic Arabidopsis leaves expressing the Cry1BM/Cry1CM genes showed 100% mortality, with a mean leaf damage score on a scale of zero to five of 0.125 for transgenic leaves and 4.2 for wild-type leaves. CONCLUSIONS: Our work indicates that the modified Cry1 genes are suitable for the development of insect resistant GM crops. Except for the PAT gene in the USA, our assessment of the intellectual property landscape of components presents within the constructs described here suggest that they can be used without the need for further licensing. This has the capacity to significantly reduce the cost of developing and using these Cry1M genes in GM crop plants in the future.


Subject(s)
Arabidopsis , Bacillus thuringiensis Toxins , Bacterial Proteins , Endotoxins , Hemolysin Proteins , Plants, Genetically Modified , Plants, Genetically Modified/genetics , Arabidopsis/genetics , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Hemolysin Proteins/genetics , Animals , Endotoxins/genetics , Promoter Regions, Genetic/genetics , Bacillus thuringiensis/genetics , Moths/genetics , Brassica/genetics , Pest Control, Biological/methods , Insecticides/pharmacology
18.
Plant Signal Behav ; 19(1): 2359257, 2024 Dec 31.
Article in English | MEDLINE | ID: mdl-38825861

ABSTRACT

Potassium (K+) plays a role in enzyme activation, membrane transport, and osmotic regulation processes. An increase in potassium content can significantly improve the elasticity and combustibility of tobacco and reduce the content of harmful substances. Here, we report that the expression analysis of Nt GF14e, a 14-3-3 gene, increased markedly after low-potassium treatment (LK). Then, chlorophyll content, POD activity and potassium content, were significantly increased in overexpression of Nt GF14e transgenic tobacco lines compared with those in the wild type plants. The net K+ efflux rates were severely lower in the transgenic plants than in the wild type under LK stress. Furthermore, transcriptome analysis identified 5708 upregulated genes and 2787 downregulated genes between Nt GF14e overexpressing transgenic tobacco plants. The expression levels of some potassium-related genes were increased, such as CBL-interacting protein kinase 2 (CIPK2), Nt CIPK23, Nt CIPK25, H+-ATPase isoform 2 a (AHA2a), Nt AHA4a, Stelar K+ outward rectifier 1(SKOR1), and high affinity K+ transporter 5 (HAK5). The result of yeast two-hybrid and luciferase complementation imaging experiments suggested Nt GF14e could interact with CIPK2. Overall, these findings indicate that NtGF14e plays a vital roles in improving tobacco LK tolerance and enhancing potassium nutrition signaling pathways in tobacco plants.


Subject(s)
14-3-3 Proteins , Gene Expression Regulation, Plant , Nicotiana , Plant Proteins , Plants, Genetically Modified , Potassium , Nicotiana/genetics , Nicotiana/metabolism , 14-3-3 Proteins/metabolism , 14-3-3 Proteins/genetics , Potassium/metabolism , Plant Proteins/metabolism , Plant Proteins/genetics , Plants, Genetically Modified/metabolism , Stress, Physiological/genetics
19.
Mol Plant Pathol ; 25(6): e13483, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38829344

ABSTRACT

As a universal second messenger, cytosolic calcium (Ca2+) functions in multifaceted intracellular processes, including growth, development and responses to biotic/abiotic stresses in plant. The plant-specific Ca2+ sensors, calmodulin and calmodulin-like (CML) proteins, function as members of the second-messenger system to transfer Ca2+ signal into downstream responses. However, the functions of CMLs in the responses of cotton (Gossypium spp.) after Verticillium dahliae infection, which causes the serious vascular disease Verticillium wilt, remain elusive. Here, we discovered that the expression level of GbCML45 was promoted after V. dahliae infection in roots of cotton, suggesting its potential role in Verticillium wilt resistance. We found that knockdown of GbCML45 in cotton plants decreased resistance while overexpression of GbCML45 in Arabidopsis thaliana plants enhanced resistance to V. dahliae infection. Furthermore, there was physiological interaction between GbCML45 and its close homologue GbCML50 by using yeast two-hybrid and bimolecular fluorescence assays, and both proteins enhanced cotton resistance to V. dahliae infection in a Ca2+-dependent way in a knockdown study. Detailed investigations indicated that several defence-related pathways, including salicylic acid, ethylene, reactive oxygen species and nitric oxide signalling pathways, as well as accumulations of lignin and callose, are responsible for GbCML45- and GbCML50-modulated V. dahliae resistance in cotton. These results collectively indicated that GbCML45 and GbCML50 act as positive regulators to improve cotton Verticillium wilt resistance, providing potential targets for exploitation of improved Verticillium wilt-tolerant cotton cultivars by genetic engineering and molecular breeding.


Subject(s)
Calcium , Disease Resistance , Gossypium , Plant Diseases , Plant Proteins , Gossypium/microbiology , Gossypium/genetics , Gossypium/metabolism , Gossypium/immunology , Disease Resistance/genetics , Plant Diseases/microbiology , Plant Proteins/metabolism , Plant Proteins/genetics , Calcium/metabolism , Gene Expression Regulation, Plant , Calmodulin/metabolism , Calmodulin/genetics , Arabidopsis/microbiology , Arabidopsis/genetics , Arabidopsis/immunology , Arabidopsis/metabolism , Ascomycota/physiology , Ascomycota/pathogenicity , Plants, Genetically Modified , Verticillium/physiology , Verticillium/pathogenicity
20.
Planta ; 260(1): 22, 2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38847958

ABSTRACT

MAIN CONCLUSION: The SiMBR genes in foxtail millet were identified and studied. Heterologous expression of SiMBR2 in Arabidopsis can improve plant tolerance to drought stress by decreasing the level of reactive oxygen species. Foxtail millet (Setaria italica L.), a C4 crop recognized for its exceptional resistance to drought stress, presents an opportunity to improve the genetic resilience of other crops by examining its unique stress response genes and understanding the underlying molecular mechanisms of drought tolerance. In our previous study, we identified several genes linked to drought stress by transcriptome analysis, including SiMBR2 (Seita.7G226600), a member of the MED25 BINDING RING-H2 PROTEIN (MBR) gene family, which is related to protein ubiquitination. Here, we have identified ten SiMBR genes in foxtail millet and conducted analyses of their structural characteristics, chromosomal locations, cis-acting regulatory elements within their promoters, and predicted transcription patterns specific to various tissues or developmental stages using bioinformatic approaches. Further investigation of the stress response of SiMBR2 revealed that its transcription is induced by treatments with salicylic acid and gibberellic acid, as well as by salt and osmotic stresses, while exposure to high or low temperatures led to a decrease in its transcription levels. Heterologous expression of SiMBR2 in Arabidopsis thaliana enhanced the plant's tolerance to water deficit by reducing the accumulation of reactive oxygen species under drought stress. In summary, this study provides support for exploring the molecular mechanisms associated with drought resistance of SiMBR genes in foxtail millet and contributing to genetic improvement and molecular breeding in other crops.


Subject(s)
Arabidopsis , Gene Expression Regulation, Plant , Plant Proteins , Setaria Plant , Stress, Physiological , Setaria Plant/genetics , Setaria Plant/physiology , Setaria Plant/drug effects , Arabidopsis/genetics , Arabidopsis/physiology , Stress, Physiological/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Droughts , Plants, Genetically Modified , Multigene Family , Promoter Regions, Genetic/genetics , Reactive Oxygen Species/metabolism
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