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1.
Front Cell Infect Microbiol ; 14: 1421744, 2024.
Article in English | MEDLINE | ID: mdl-38988809

ABSTRACT

The increase in incidence and geographical expansion of viruses transmitted by the Aedes mosquitoes, such as dengue (DENV) and zika (ZIKV) in the Americas, represents a burden for healthcare systems in tropical and subtropical regions. These and other under-detected arboviruses co-circulate in Costa Rica, adding additional complexity to their management due to their shared epidemiological behavior and similarity of symptoms in early stages. Since diagnostics of febrile illness is mostly based on clinical symptoms alone, we gathered acute-phase serum and urine from 399 samples of acute dengue-like cases from two healthcare facilities of Costa Rica, during an outbreak of arboviruses from July 2017 to May 2018, and tested them using molecular and serological methods. The analyses showed that of the clinically presumptive arbovirus cases that were reported, only 39.4% (n=153) of the samples were confirmed positive by RT-PCR to be DENV (DENV (10.3%), CHIKV (0.2%), ZIKV (27.3%), or mixed infections (1.5%). RT-PCR for other alphaviruses and flaviviruses, and PCR for Leptospira sp were negative. Furthermore, to assess flavivirus positivity in post-acute patients, the negative sera were tested against Dengue-IgM. 20% of sera were found positive, confounding even more the definitive number of cases, and emphasizing the need of several distinct diagnostic tools for accurate diagnostics. Molecular characterization of the prM and E genes from isolated viruses revealed that the American/Asian genotype of DENV-2 and the Asian lineage of ZIKV were circulating during this outbreak. Two different clades of DENV-2 American/Asian genotype were identified to co-circulate in the same region and a difference in the platelet and leukocyte count was noted between people infected with each clade, suggesting a putative distinct virulence. Our study sheds light on the necessity for healthcare strategies in managing arbovirus outbreaks, emphasizing the importance of comprehensive molecular and serological diagnostic approaches, as well as molecular characterization. This approach aids in enhancing our understanding of the clinical and epidemiological aspects of arboviral diseases during outbreaks. Our research highlights the need to strengthen training programs for health professionals and the need to increase research-based on laboratory evidence for diagnostic accuracy, guidance, development and implementation of public health interventions and epidemiological surveillance.


Subject(s)
Dengue Virus , Dengue , Disease Outbreaks , Zika Virus Infection , Zika Virus , Humans , Costa Rica/epidemiology , Dengue/epidemiology , Dengue/diagnosis , Dengue/virology , Zika Virus Infection/epidemiology , Zika Virus Infection/diagnosis , Zika Virus Infection/virology , Zika Virus/genetics , Zika Virus/isolation & purification , Dengue Virus/genetics , Dengue Virus/isolation & purification , Dengue Virus/classification , Female , Male , Adult , Adolescent , Middle Aged , Young Adult , Child , Child, Preschool , Aged , Caribbean Region/epidemiology , Phylogeny , Infant , Animals , Coinfection/epidemiology , Coinfection/virology , Aged, 80 and over , Antibodies, Viral/blood
2.
Molecules ; 29(14)2024 Jul 15.
Article in English | MEDLINE | ID: mdl-39064900

ABSTRACT

Pathogenic microorganisms play a crucial role in the global disease burden due to their ability to cause various diseases and spread through multiple transmission routes. Immunity tests identify antigens related to these pathogens, thereby confirming past infections and monitoring the host's immune response. Traditional pathogen detection methods, including enzyme-linked immunosorbent assays (ELISAs) and chemiluminescent immunoassays (CLIAs), are often labor-intensive, slow, and reliant on sophisticated equipment and skilled personnel, which can be limiting in resource-poor settings. In contrast, the development of microfluidic technologies presents a promising alternative, offering automation, miniaturization, and cost efficiency. These advanced methods are poised to replace traditional assays by streamlining processes and enabling rapid, high-throughput immunity testing for pathogens. This review highlights the latest advancements in microfluidic systems designed for rapid and high-throughput immunity testing, incorporating immunosensors, single molecule arrays (Simoas), a lateral flow assay (LFA), and smartphone integration. It focuses on key pathogenic microorganisms such as SARS-CoV-2, influenza, and the ZIKA virus (ZIKV). Additionally, the review discusses the challenges, commercialization prospects, and future directions to advance microfluidic systems for infectious disease detection.


Subject(s)
SARS-CoV-2 , Humans , SARS-CoV-2/immunology , SARS-CoV-2/isolation & purification , Microfluidics/methods , Microfluidics/instrumentation , COVID-19/immunology , COVID-19/diagnosis , COVID-19/virology , Microfluidic Analytical Techniques/instrumentation , Microfluidic Analytical Techniques/methods , Immunoassay/methods , Zika Virus/immunology , Lab-On-A-Chip Devices , Biosensing Techniques/methods , Influenza, Human/diagnosis , Influenza, Human/immunology , Zika Virus Infection/diagnosis , Zika Virus Infection/immunology
3.
Braz J Infect Dis ; 28(4): 103855, 2024.
Article in English | MEDLINE | ID: mdl-39053887

ABSTRACT

In Brazil, Dengue, Zika and Chikungunya viruses constitute a major threat to the public health system. Simultaneous circulation of these arboviruses occurs in many regions of the world due to the expansion of transmission vectors. The infection by these arboviruses triggers similar symptoms during their acute phase. However, in some cases, severe symptoms may occur, leading to different types of disabilities and even death. In this context, considering the similarity of the symptoms, the problems caused by the infection of these arboviruses, and the increasing risk of coinfection in humans, the differential diagnosis of these infections is essential for clinical management and epidemiological investigation. Thus, this study aimed to identify, through diagnosis via Quantitative Polymerase Chain Reaction with Reverse Transcription, arbovirus coinfection in patients from the Tocantins state (Northern Brazil). A total of 495 samples were analyzed, three from which were determined to be a coinfection of Dengue and Chikungunya viruses. The data obtained here indicate the co-circulation and coinfection by Dengue and Chikungunya viruses in the Tocantins state. These results highlight the importance of monitoring the circulation of these arboviruses for the development of health actions that aim their prevention and combat, as well as their clinical and therapeutic management.


Subject(s)
Arboviruses , Chikungunya Fever , Coinfection , Dengue , Multiplex Polymerase Chain Reaction , Humans , Brazil/epidemiology , Chikungunya Fever/diagnosis , Dengue/diagnosis , Coinfection/virology , Arboviruses/genetics , Arboviruses/isolation & purification , Adult , Female , Male , Zika Virus Infection/diagnosis , Young Adult , Middle Aged , Adolescent , Child , Real-Time Polymerase Chain Reaction , Arbovirus Infections/virology , Arbovirus Infections/diagnosis , Child, Preschool , Dengue Virus/genetics , Dengue Virus/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction , Chikungunya virus/genetics , Chikungunya virus/isolation & purification
4.
Viruses ; 16(7)2024 Jul 03.
Article in English | MEDLINE | ID: mdl-39066237

ABSTRACT

In response to the 2015 Zika virus (ZIKV) epidemic that occurred in Brazil, numerous commercial serological assays have been developed for clinical and research applications. Diagnosis of recent infection in pregnant women remains challenging. Having standardized, comparative studies of ZIKV tests is important for implementing optimal diagnostic testing and disease surveillance. This is especially important for serology tests used to detect ZIKV infection given that antibodies against ZIKV can cross-react with other arboviruses in the same virus family, such as dengue virus (DENV), yellow fever virus (YFV) and West Nile virus (WNV). We looked at the sensitivity and specificity of tests detecting ZIKV antibodies (IgM, IgG) from multiple manufacturers using panels of samples previously collected with known exposure to ZIKV and other arboviruses. We found that performance of the IgM tests was highly variable, with only one test (Inbios 2.0 IgM capture ELISA) having both high sensitivity and specificity. All IgG tests showed good sensitivity; however, specificity was highly variable, with some assays giving false-positive results on samples infected by another flavivirus. Overall, the results confirmed that accurate ZIKV antibody testing is challenging, especially in specimens from regions endemic for multiple other flaviviruses, and highlight the importance of available and suitable reference samples to evaluate ZIKV diagnostics.


Subject(s)
Antibodies, Viral , Immunoglobulin G , Immunoglobulin M , Sensitivity and Specificity , Serologic Tests , Zika Virus Infection , Zika Virus , Humans , Zika Virus/immunology , Zika Virus Infection/diagnosis , Zika Virus Infection/immunology , Zika Virus Infection/blood , Antibodies, Viral/blood , Antibodies, Viral/immunology , Serologic Tests/methods , Serologic Tests/standards , Immunoglobulin M/blood , Immunoglobulin G/blood , Enzyme-Linked Immunosorbent Assay/methods , Enzyme-Linked Immunosorbent Assay/standards , Cross Reactions/immunology , Female , Pregnancy , Brazil
5.
Molecules ; 29(11)2024 May 21.
Article in English | MEDLINE | ID: mdl-38893293

ABSTRACT

Within the fields of infectious disease diagnostics, microfluidic-based integrated technology systems have become a vital technology in enhancing the rapidity, accuracy, and portability of pathogen detection. These systems synergize microfluidic techniques with advanced molecular biology methods, including reverse transcription polymerase chain reaction (RT-PCR), loop-mediated isothermal amplification (LAMP), and clustered regularly interspaced short palindromic repeats (CRISPR), have been successfully used to identify a diverse array of pathogens, including COVID-19, Ebola, Zika, and dengue fever. This review outlines the advances in pathogen detection, attributing them to the integration of microfluidic technology with traditional molecular biology methods and smartphone- and paper-based diagnostic assays. The cutting-edge diagnostic technologies are of critical importance for disease prevention and epidemic surveillance. Looking ahead, research is expected to focus on increasing detection sensitivity, streamlining testing processes, reducing costs, and enhancing the capability for remote data sharing. These improvements aim to achieve broader coverage and quicker response mechanisms, thereby constructing a more robust defense for global public health security.


Subject(s)
Molecular Diagnostic Techniques , Nucleic Acid Amplification Techniques , Humans , Nucleic Acid Amplification Techniques/methods , Molecular Diagnostic Techniques/methods , Microfluidics/methods , Communicable Diseases/diagnosis , COVID-19/diagnosis , COVID-19/virology , SARS-CoV-2/genetics , SARS-CoV-2/isolation & purification , Microfluidic Analytical Techniques/methods , Dengue/diagnosis , Zika Virus Infection/diagnosis , Zika Virus Infection/virology , Zika Virus/genetics , Zika Virus/isolation & purification
6.
Lab Chip ; 24(14): 3490-3497, 2024 07 10.
Article in English | MEDLINE | ID: mdl-38920004

ABSTRACT

Point-of-care (POC) diagnostics have emerged as a crucial technology for emerging pathogen detections to enable rapid and on-site detection of infectious diseases. However, current POC devices often suffer from limited sensitivity with poor reliability to provide quantitative readouts. In this paper, we present a self-powered digital loop-mediated isothermal amplification (dLAMP) microfluidic chip (SP-dChip) for the rapid and quantitative detection of nucleic acids. The SP-dChip utilizes a vacuum lung design to passively digitize samples into individual nanoliter wells for high-throughput analysis. The superior digitization scheme is further combined with reverse transcription loop-mediated isothermal amplification (RT-LAMP) to demonstrate dLAMP detection of Zika virus (ZIKV). Firstly, the LAMP assay is loaded into the chip and passively digitized into individual wells. Mineral oil is then pipetted through the chip to differentiate each well as an individual reactor. The chip did not require any external pumping or power input for rapid and reliable results to detect ZIKA RNA as low as 100 copies per µL within one hour. As such, this SP-dChip offers a new class of solutions for truly affordable, portable, and quantitative POC detections for emerging viruses.


Subject(s)
Lab-On-A-Chip Devices , Microfluidic Analytical Techniques , Nucleic Acid Amplification Techniques , Zika Virus , Nucleic Acid Amplification Techniques/instrumentation , Nucleic Acid Amplification Techniques/methods , Zika Virus/isolation & purification , Zika Virus/genetics , Microfluidic Analytical Techniques/instrumentation , Equipment Design , Humans , Molecular Diagnostic Techniques/instrumentation , Molecular Diagnostic Techniques/methods , Zika Virus Infection/diagnosis , Zika Virus Infection/virology , Point-of-Care Systems , RNA, Viral/analysis , RNA, Viral/genetics
7.
Am J Trop Med Hyg ; 111(1): 107-112, 2024 Jul 03.
Article in English | MEDLINE | ID: mdl-38834052

ABSTRACT

Diagnostics for febrile illnesses other than malaria are not readily available in rural sub-Saharan Africa. This study assessed exposure to three mosquito-borne arboviruses-dengue virus (DENV), Zika virus (ZIKV), and chikungunya virus (CHIKV)-in southern Mali. Seroprevalence for DENV, CHIKV, and ZIKV was analyzed by detection of IgG antibodies and determined to be 77.2%, 31.2%, and 25.8%, respectively. Among study participants, 11.3% were IgG-positive for all three arboviruses. DENV had the highest seroprevalence rate at all sites; the highest seroprevalence of CHIKV and ZIKV was observed in Bamba. The seroprevalence for all three arboviruses increased with age, and the highest seroprevalence was observed among adults older than 50 years. The prevalence of Plasmodium spp. in the cohort was analyzed by microscopy and determined to be 44.5% (N = 600) with Plasmodium falciparum representing 95.1% of all infections. This study demonstrates the co-circulation of arboviruses in a region hyperendemic for malaria and highlights the needs for arbovirus diagnostics in rural sub-Saharan Africa.


Subject(s)
Chikungunya Fever , Dengue Virus , Humans , Mali/epidemiology , Seroepidemiologic Studies , Adult , Middle Aged , Male , Female , Adolescent , Young Adult , Chikungunya Fever/epidemiology , Chikungunya Fever/blood , Dengue Virus/immunology , Child , Child, Preschool , Chikungunya virus/immunology , Dengue/epidemiology , Arboviruses/immunology , Arboviruses/isolation & purification , Antibodies, Viral/blood , Malaria/epidemiology , Arbovirus Infections/epidemiology , Arbovirus Infections/virology , Zika Virus Infection/epidemiology , Zika Virus Infection/blood , Zika Virus Infection/diagnosis , Zika Virus/immunology , Endemic Diseases , Immunoglobulin G/blood , Aged , Infant , Prevalence
8.
Cells ; 13(10)2024 May 09.
Article in English | MEDLINE | ID: mdl-38786028

ABSTRACT

Zika (ZIKV) and Chikungunya (CHIKV) viruses are mosquito-transmitted infections, or vector-borne pathogens, that emerged a few years ago. Reliable diagnostic tools for ZIKV and CHIKV-inexpensive, multiplexed, rapid, highly sensitive, and specific point-of-care (POC) systems-are vital for appropriate risk management and therapy. We recently studied a detection system with great success in Mexico (Villahermosa, state of Tabasco), working with human sera from patients infected with those viruses. The research conducted in Mexico validated the efficacy of a novel two-step rapid isothermal amplification technique (RAMP). This approach, which encompasses recombinase polymerase amplification (RPA) followed by loop-mediated isothermal amplification (LAMP), had been previously established in the lab using lab-derived Zika (ZIKV) and Chikungunya (CHIKV) viruses. Crucially, our findings confirmed that this technique is also effective when applied to human sera samples collected from locally infected individuals in Mexico.


Subject(s)
Chikungunya virus , Nucleic Acid Amplification Techniques , Zika Virus Infection , Zika Virus , Humans , Zika Virus/genetics , Zika Virus/isolation & purification , Nucleic Acid Amplification Techniques/methods , Chikungunya virus/genetics , Chikungunya virus/isolation & purification , Zika Virus Infection/diagnosis , Zika Virus Infection/virology , Zika Virus Infection/blood , Chikungunya Fever/diagnosis , Chikungunya Fever/virology , Chikungunya Fever/blood , Molecular Diagnostic Techniques/methods , RNA, Viral/genetics , RNA, Viral/blood , Mexico , Sensitivity and Specificity , RNA Viruses/genetics , RNA Viruses/isolation & purification
9.
Braz J Infect Dis ; 28(3): 103766, 2024.
Article in English | MEDLINE | ID: mdl-38802065

ABSTRACT

BACKGROUND: The last five decades have seen a surge in viral outbreaks, particularly in tropical and subtropical regions like Brazil, where endemic arboviruses such as Dengue (DENV), Zika (ZIKV), and Chikungunya (CHIKV) pose significant threats. However, current diagnostic strategies exhibit limitations, leading to gaps in infection screening, arbovirus differential diagnoses, DENV serotyping, and life-long infection tracking. This deficiency impedes critical information availability regarding an individual's current infection and past infection history, disease risk assessment, vaccination needs, and policy formulation. Additionally, the availability of point-of-care diagnostics and knowledge regarding immune profiles at the time of infection are crucial considerations. OBJECTIVES: This review underscores the urgent need to strengthen diagnostic methods for arboviruses in Brazil and emphasizes the importance of data collection to inform public health policies for improved diagnostics, surveillance, and policy formulation. METHODS: We evaluated the diagnostic landscape for arboviral infections in Brazil, focusing on tailored, validated methods. We assessed diagnostic methods available for sensitivity and specificity metrics in the context of Brazil. RESULTS: Our review identifies high-sensitivity, high-specificity diagnostic methods for arboviruses and co-infections. Grifols transcription-mediated amplification assays are recommended for DENV, CHIKV, and ZIKV screening, while IgG/IgM ELISA assays outperform Rapid Diagnostic Tests (RDTs). The Triplex real-time RT-PCR assay is recommended for molecular screening due to its sensitivity and specificity. CONCLUSION: Enhanced diagnostic methods, on-going screening, and tracking are urgently needed in Brazil to capture the complex landscape of arboviral infections in the country. Recommendations include nationwide arbovirus differential diagnosis for DENV, ZIKV, and CHIKV, along with increased DENV serotyping, and lifelong infection tracking to combat enduring viral threats and reduce severe presentations.


Subject(s)
Arbovirus Infections , Arboviruses , Humans , Brazil/epidemiology , Arbovirus Infections/diagnosis , Arbovirus Infections/epidemiology , Arboviruses/immunology , Arboviruses/classification , Sensitivity and Specificity , Public Health , Data Collection , Dengue/diagnosis , Dengue/epidemiology , Zika Virus Infection/diagnosis , Zika Virus Infection/epidemiology
10.
Viruses ; 16(4)2024 03 30.
Article in English | MEDLINE | ID: mdl-38675882

ABSTRACT

As a mosquito-borne flavivirus, Zika virus (ZIKV) has been identified as a global health threat. The virus has been linked to severe congenital disabilities, including microcephaly and other congenital malformations, resulting in fatal intrauterine death. Therefore, developing sensitive and specific methods for the early detection and accurate diagnosis of the ZIKV is essential for controlling its spread and mitigating its impact on public health. Herein, we set up a novel nucleic acid detection system based on Pyrococcus furiosus Argonaute (PfAgo)-mediated nucleic acid detection, targeting the non-structural protein 5 (NS5) region of the ZIKV genome (abbreviated ZIKV-PAND). Without preamplification with the polymerase chain reaction (PCR), the minimum detection concentration (MDC) of ZIKV-PAND was about 10 nM. When introducing an amplification step, the MDC can be dramatically decreased to the aM level (8.3 aM), which is comparable to qRT-PCR assay (1.6 aM). In addition, the diagnostic findings from the analysis of simulated clinical samples or Zika virus samples using ZIKV-PAND show a complete agreement of 100% with qRT-PCR assays. This correlation can aid in the implementation of molecular testing for clinical diagnoses and the investigation of ZIKV infection on an epidemiological scale.


Subject(s)
Pyrococcus furiosus , Viral Nonstructural Proteins , Zika Virus Infection , Zika Virus , Zika Virus/genetics , Zika Virus/isolation & purification , Zika Virus Infection/diagnosis , Zika Virus Infection/virology , Humans , Viral Nonstructural Proteins/genetics , Pyrococcus furiosus/genetics , Argonaute Proteins/genetics , Sensitivity and Specificity , RNA, Viral/genetics , Molecular Diagnostic Techniques/methods , Nucleic Acid Amplification Techniques/methods , Genome, Viral
12.
PLoS Negl Trop Dis ; 18(4): e0012100, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38635656

ABSTRACT

Zika virus (ZIKV), an arbovirus from the Flaviviridae family, is the causative agent of Zika fever, a mild and frequent oligosymptomatic disease in humans. Nonetheless, on rare occasions, ZIKV infection can be associated with Guillain-Barré Syndrome (GBS), and severe congenital complications, such as microcephaly. The oligosymptomatic disease, however, presents symptoms that are quite similar to those observed in infections caused by other frequent co-circulating arboviruses, including dengue virus (DENV). Moreover, the antigenic similarity between ZIKV and DENV, and even with other members of the Flaviviridae family, complicates serological testing due to the high cross-reactivity of antibodies. Here, we designed, produced in a prokaryotic expression system, and purified three multiepitope proteins (ZIKV-1, ZIKV-2, and ZIKV-3) for differential diagnosis of Zika. The proteins were evaluated as antigens in ELISA tests for the detection of anti-ZIKV IgG using ZIKV- and DENV-positive human sera. The recombinant proteins were able to bind and detect anti-ZIKV antibodies without cross-reactivity with DENV-positive sera and showed no reactivity with Chikungunya virus (CHIKV)- positive sera. ZIKV-1, ZIKV-2, and ZIKV-3 proteins presented 81.6%, 95%, and 66% sensitivity and 97%, 96%, and 84% specificity, respectively. Our results demonstrate the potential of the designed and expressed antigens in the development of specific diagnostic tests for the detection of IgG antibodies against ZIKV, especially in regions with the circulation of multiple arboviruses.


Subject(s)
Arboviruses , Chikungunya Fever , Dengue Virus , Dengue , Zika Virus Infection , Zika Virus , Humans , Zika Virus Infection/diagnosis , Zika Virus/genetics , Epitopes , Antibodies, Viral , Immunoglobulin G
13.
P R Health Sci J ; 43(1): 54-56, 2024 Mar.
Article in English | MEDLINE | ID: mdl-38512762

ABSTRACT

We report on the first case of congenital Zika syndrome to be identified during the COVID-19 pandemic in Puerto Rico. The Zika virus (ZIKV) infection was first seen in Puerto Rico in December 2015. It is a flavivirus with vertical transmission, spreading from infected mothers to their fetuses and having a broad spectrum of clinical manifestations, of which microcephaly is the most worrisome. In Puerto Rico, routine ZIKV screening during pregnancy was implemented in October 2016. However, this practice has become less frequent over time. Nevertheless, the transmission of ZIKV continues, so it is important to ensure routine ZIKV screening in endemic regions, such as Puerto Rico.


Subject(s)
COVID-19 , Zika Virus Infection , Zika Virus , Pregnancy , Infant , Female , Humans , Infant, Newborn , Zika Virus Infection/diagnosis , Zika Virus Infection/epidemiology , Zika Virus Infection/prevention & control , Pandemics , COVID-19/epidemiology , Infant, Premature , COVID-19 Testing
14.
Diagn Microbiol Infect Dis ; 109(2): 116238, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38554539

ABSTRACT

The interpretation for Zika virus serology results is challenging due to high antibody cross reactivity with other flaviviruses. This limits availability of reliable and accurate methods for serosurveillance studies to understand the disease burden. Therefore, we conducted study to harmonize anti-Zika IgG antibody detection assays with 1st WHO International Standard (16/352) and working standard (16/320) for anti-Zika virus antibody.Additionally, evaluated NuGenTMZIKA-IgG and NovaLisa®ZIKA virus IgG-Capture ELISA using a panel of 278 seraFurther, 106 samples positive for other-flavi viruses were taken for assessing cross-reactivity of the assay, all serums were further tested by Zika-PRNT. The results of this study indicates satisfactory performance of both the assays. Serological and neutralization assays were calibrated according to the international standards. This will help in understanding antibody dynamics in serosurveillance and vaccine studies. However the performance of the kits with possibilities of cross-reactivity will have to be verified by coupling ZIKV and DENV specific ELISA.


Subject(s)
Antibodies, Viral , Cross Reactions , Enzyme-Linked Immunosorbent Assay , Immunoglobulin G , Zika Virus Infection , Zika Virus , Enzyme-Linked Immunosorbent Assay/methods , Enzyme-Linked Immunosorbent Assay/standards , Zika Virus/immunology , Immunoglobulin G/blood , Humans , Antibodies, Viral/blood , Zika Virus Infection/diagnosis , Zika Virus Infection/immunology , Zika Virus Infection/blood , Reagent Kits, Diagnostic/standards , Serologic Tests/standards , Serologic Tests/methods , Sensitivity and Specificity , Female , Adult , Adolescent , Young Adult
15.
Braz J Microbiol ; 55(2): 1083-1090, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38424268

ABSTRACT

Chikungunya (CHIKV), Zika (ZIKV), and dengue viruses (DENV) are vector-borne pathogens that cause emerging and re-emerging epidemics throughout tropical and subtropical countries. The symptomatology is similar among these viruses and frequently co-circulates in the same areas, making the diagnosis arduous. Although there are different methods for detecting and quantifying pathogens, real-time reverse transcription-polymerase chain reaction (real-time RT-qPCR) has become a leading technique for detecting viruses. However, the currently developed assays frequently involve probes and high-cost reagents, limiting access in low-income countries. Therefore, this study aims to design and evaluate a quantitative one-step RT-qPCR assay to detect CHIKV, ZIKV, and DENV with high specificity, reproducibility, and low cost in multiple cell substrates. We established a DNA intercalating green dye-based RT-qPCR test that targets nsP1 of CHIKV, and NS5 gene of ZIKV, and DENV for the amplification reaction. The assay exhibited a high specificity confirmed by the melting curve analysis. No cross-reactivity was observed between the three viruses or unspecific amplification of host RNA. The sensitivity of the reaction was evaluated for each virus assay, getting a limit of detection of one RNA copy per virus. Standard curves were constructed, obtaining a reaction efficiency of ~ 100%, a correlation coefficient (R2) of ~ 0.97, and a slope of -3.3. The coefficient of variation (CV) ranged from 0.02 to 1.43. In addition, the method was optimized for viral quantification and tested in Vero, BHK-21, C6/36, LULO, and the Aedes cell lines. Thus, the DNA intercalating green dye-based RT-qPCR assay was a highly specific, sensitive, reproducible, and effective method for detecting and quantifying CHIKV, ZIKV, and DENV in different cell substrates that could also be applied in clinical samples.


Subject(s)
Chikungunya Fever , Chikungunya virus , Dengue Virus , Real-Time Polymerase Chain Reaction , Sensitivity and Specificity , Zika Virus Infection , Zika Virus , Zika Virus/genetics , Zika Virus/isolation & purification , Chikungunya virus/genetics , Chikungunya virus/isolation & purification , Dengue Virus/genetics , Dengue Virus/isolation & purification , Real-Time Polymerase Chain Reaction/methods , Animals , Humans , Chikungunya Fever/diagnosis , Chikungunya Fever/virology , Zika Virus Infection/virology , Zika Virus Infection/diagnosis , Dengue/virology , Dengue/diagnosis , Chlorocebus aethiops , Reproducibility of Results , Vero Cells , RNA, Viral/genetics , Cell Line
16.
Virol J ; 21(1): 42, 2024 02 15.
Article in English | MEDLINE | ID: mdl-38360693

ABSTRACT

BACKGROUND: Aedes albopictus is the secondary vector for dengue virus (DENV) in the Philippines, and also harbors chikungunya (CHIKV) and Zika (ZIKV) viruses. This study aimed to determine the minimum infection rates (MIRs) of CHIKV, DENV serotypes, and ZIKV in Ae. albopictus collected from selected two-site categories by altitude (highland [H] and lowland [L] sites) in Cebu city, Philippines during the wet (WS) and dry seasons (DS) of 2021-2022, and to explore the relationships between these arboviral MIRs and the local weather. METHODS: The viral RNA extracts in pooled and reared adult Ae. albopictus collected during the DS and WS from two-site categories were subjected to RT-PCR to amplify and detect gene loci specific for CHIKV, DENV-1 to DENV-4, and ZIKV and analyzed with the weather data. RESULTS: The range of CHIKV MIRs was higher in the WS (13.61-107.38 infected individuals per 1,000 mosquitoes) than in the DS (13.22-44.12), but was similar between the two-site categories. Rainfall (RF) influenced the CHIKV MIR. The MIR ranges of both DENV-2 (WS: H = 0, L = 0; DS: H = 0-5.92; L = 0-2.6) and DENV-4 (WS: H = 0, L = 0-2.90; DS: H = 2.96-6.13, L = 0-15.63) differed by season but not between the two-site categories. Relative humidity (RH), RF, and temperature did not influence DENVs' MIRs. The MIR range of ZIKV was similar in both seasons (WS: 11.36-40.27; DS: 0-46.15) and two-site categories (H = 0-90.91, L = 0-55.56). RH and temperature influenced ZIKV MIR. CONCLUSIONS: RF influenced CHIKV MIR in Ae. albopictus, whereas RH and temperature influenced that of ZIKV. Season influenced the MIRs of CHIKV and DENVs but not in ZIKV. Ae. albopictus were co-infected with CHIKV, DENVs, and ZIKV in both highland and lowland sites in Cebu city. Recommendations include all-year-round implementation of the Philippine Department of Health's  4S enhanced strategy and installation of water pipelines in rural highlands for vector and disease control. Our findings are relevant to protect public health in the tropics in this climate change.


Subject(s)
Aedes , Chikungunya Fever , Dengue Virus , Dengue , Zika Virus Infection , Zika Virus , Adult , Animals , Humans , Zika Virus/genetics , Chikungunya Fever/epidemiology , Chikungunya Fever/diagnosis , Zika Virus Infection/diagnosis , Seasons , Philippines/epidemiology , Dengue Virus/genetics , Temperature , Humidity , Mosquito Vectors
17.
J Proteome Res ; 23(4): 1200-1220, 2024 04 05.
Article in English | MEDLINE | ID: mdl-38390744

ABSTRACT

The Zika virus (ZIKV) can be vertically transmitted, causing congenital Zika syndrome (CZS) in fetuses. ZIKV infection in early gestational trimesters increases the chances of developing CZS. This syndrome involves several pathologies with a complex diagnosis. In this work, we aim to identify biological processes and molecular pathways related to CZS and propose a series of putative protein and metabolite biomarkers for CZS prognosis in early pregnancy trimesters. We analyzed serum samples of healthy pregnant women and ZIKV-infected pregnant women bearing nonmicrocephalic and microcephalic fetuses. A total of 1090 proteins and 512 metabolites were identified by bottom-up proteomics and untargeted metabolomics, respectively. Univariate and multivariate statistical approaches were applied to find CZS differentially abundant proteins (DAP) and metabolites (DAM). Enrichment analysis (i.e., biological processes and molecular pathways) of the DAP and the DAM allowed us to identify the ECM organization and proteoglycans, amino acid metabolism, and arachidonic acid metabolism as CZS signatures. Five proteins and four metabolites were selected as CZS biomarker candidates. Serum multiomics analysis led us to propose nine putative biomarkers for CZS prognosis with high sensitivity and specificity.


Subject(s)
Pregnancy Complications, Infectious , Zika Virus Infection , Zika Virus , Pregnancy , Female , Humans , Zika Virus Infection/diagnosis , Zika Virus/genetics , Pregnancy Complications, Infectious/diagnosis , Pregnancy Complications, Infectious/pathology , Multiomics , Biomarkers
18.
Diagn Microbiol Infect Dis ; 109(1): 116204, 2024 May.
Article in English | MEDLINE | ID: mdl-38402756

ABSTRACT

This study aims to determine the frequency and clinical manifestations of dengue and chikungunya viral infections in the district hospital of Mfou, Centre region of Cameroon where malaria is endemic. Blood samples were collected from suspected cases and tested for Plasmodium parasites and for the molecular detection of viral RNAs (dengue, zika and chikungunya viruses) using TRIOPLEX qPCR. A total of 108 patients were clinically suspected among which 25 % were male and 50 % were less than 15.5 years old. Of these 14.8 % (16/108) and 2.8 % (3/108) had acute dengue and chikungunya fevers respectively. Co-infection with malaria was reported in 56.3 % (9/16) of Dengue cases and 33.3 % (1/3) of chikungunya cases. Clinical profiling further revealed that nausea and vomiting show a significant difference in dengue infected individuals to those of non-infected individuals (P = 0.027). The presence of dengue fever and chikungunya fever and the absence of specific clinical manifestations highlight the need to strengthen surveillance of acute febrile infections for a better estimation of the burden of arboviruses.


Subject(s)
Chikungunya Fever , Chikungunya virus , Dengue Virus , Dengue , Malaria , Zika Virus Infection , Zika Virus , Humans , Male , Adolescent , Female , Chikungunya Fever/complications , Chikungunya Fever/epidemiology , Chikungunya Fever/diagnosis , Dengue/complications , Dengue/epidemiology , Dengue/diagnosis , Dengue Virus/genetics , Cameroon/epidemiology , Chikungunya virus/genetics , Zika Virus Infection/diagnosis , Malaria/complications , Malaria/epidemiology , Fever/epidemiology
19.
Exp Neurol ; 374: 114699, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38301864

ABSTRACT

The congenital Zika syndrome (CZS) has been characterized as a set of several brain changes, such as reduced brain volume and subcortical calcifications, in addition to cognitive deficits. Microcephaly is one of the possible complications found in newborns exposed to Zika virus (ZIKV) during pregnancy, although it is an impacting clinical sign. This study aimed to investigate the consequences of a model of congenital ZIKV infection by evaluating the histopathology, blood-brain barrier, and neuroinflammation in pup rats 24 h after birth, and neurodevelopment of the offspring. Pregnant rats were inoculated subcutaneously with ZIKV-BR at the dose 1 × 107 plaque-forming unit (PFU mL-1) of ZIKV isolated in Brazil (ZIKV-BR) on gestational day 18 (G18). A set of pups, 24 h after birth, was euthanized. The brain was collected and later evaluated for the histopathology of brain structures through histological analysis. Additionally, analyses of the blood-brain barrier were conducted using western blotting, and neuroinflammation was assessed using ELISA. Another set of animals was evaluated on postnatal days 3, 6, 9, and 12 for neurodevelopment by observing the developmental milestones. Our results revealed hippocampal atrophy in ZIKV animals, in addition to changes in the blood-brain barrier structure and pro-inflammatory cytokines expression increase. Regarding neurodevelopment, a delay in important reflexes during the neonatal period in ZIKV animals was observed. These findings advance the understanding of the pathophysiology of CZS and contribute to enhancing the rat model of CZS.


Subject(s)
Microcephaly , Pregnancy Complications, Infectious , Zika Virus Infection , Zika Virus , Pregnancy , Humans , Female , Rats , Animals , Zika Virus Infection/complications , Zika Virus Infection/diagnosis , Zika Virus/physiology , Pregnancy Complications, Infectious/pathology , Blood-Brain Barrier/pathology , Neuroinflammatory Diseases , Microcephaly/etiology , Microcephaly/pathology , Atrophy/pathology , Hippocampus/pathology
20.
Adv Exp Med Biol ; 1443: 63-85, 2024.
Article in English | MEDLINE | ID: mdl-38409416

ABSTRACT

Zika virus (ZIKV) infection can be transmitted vertically, leading to the development of congenital Zika syndrome (CZS) in infected fetuses. During the early stages of gestation, the fetuses face an elevated risk of developing CZS. However, it is important to note that late-stage infections can also result in adverse outcomes. The differences between CZS and non-CZS phenotypes remain poorly understood. In this review, we provide a summary of the molecular mechanisms underlying ZIKV infection and placental and blood-brain barriers trespassing. Also, we have included molecular alterations that elucidate the progression of CZS by proteomics and metabolomics studies. Lastly, this review comprises investigations into body fluid samples, which have aided to identify potential biomarkers associated with CZS.


Subject(s)
Pregnancy Complications, Infectious , Zika Virus Infection , Zika Virus , Pregnancy , Female , Humans , Zika Virus Infection/diagnosis , Zika Virus/genetics , Placenta , Proteomics , Biomarkers
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