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1.
J Physiol ; 602(8): 1637-1654, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38625711

RESUMO

The eukaryotic cell is highly compartmentalized with organelles. Owing to their function in transporting metabolites, metabolic intermediates and byproducts of metabolic activity, organelles are important players in the orchestration of cellular function. Recent advances in optical methods for interrogating the different aspects of organellar activity promise to revolutionize our ability to dissect cellular processes with unprecedented detail. The transport activity of organelles is usually coupled to the transport of charged species; therefore, it is not only associated with the metabolic landscape but also entangled with membrane potentials. In this context, the targeted expression of fluorescent probes for interrogating organellar membrane potential (Ψorg) emerges as a powerful approach, offering less-invasive conditions and technical simplicity to interrogate cellular signalling and metabolism. Different research groups have made remarkable progress in adapting a variety of optical methods for measuring and monitoring Ψorg. These approaches include using potentiometric dyes, genetically encoded voltage indicators, hybrid fluorescence resonance energy transfer sensors and photoinduced electron transfer systems. These studies have provided consistent values for the resting potential of single-membrane organelles, such as lysosomes, the Golgi and the endoplasmic reticulum. We can foresee the use of dynamic measurements of Ψorg to study fundamental problems in organellar physiology that are linked to serious cellular disorders. Here, we present an overview of the available techniques, a survey of the resting membrane potential of internal membranes and, finally, an open-source mathematical model useful to interpret and interrogate membrane-bound structures of small volume by using the lysosome as an example.


Assuntos
Lisossomos , Organelas , Potenciais da Membrana , Organelas/metabolismo , Lisossomos/metabolismo , Retículo Endoplasmático/metabolismo , Corantes Fluorescentes/análise , Corantes Fluorescentes/química , Corantes Fluorescentes/metabolismo
2.
J Chem Phys ; 160(11)2024 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-38511659

RESUMO

In this study, we simulate mechanically interlocked semiflexible ring polymers inspired by the minicircles of kinetoplast DNA (kDNA) networks. Using coarse-grained molecular dynamics simulations, we investigate the impact of molecular topological linkage and nanoconfinement on the conformational properties of two- and three-ring polymer systems in varying solvent qualities. Under good-quality solvents, for two-ring systems, a higher number of crossing points lead to a more internally constrained structure, reducing their mean radius of gyration. In contrast, three-ring systems, which all had the same crossing number, exhibited more similar sizes. In unfavorable solvents, structures collapse, forming compact configurations with increased contacts. The morphological diversity of structures primarily arises from topological linkage rather than the number of rings. In three-ring systems with different topological conformations, structural uniformity varies based on link types. Extreme confinement induces isotropic and extended conformations for catenated polymers, aligning with experimental results for kDNA networks and influencing the crossing number and overall shape. Finally, the flat-to-collapse transition in extreme confinement occurs earlier (at relatively better solvent conditions) compared to non-confined systems. This study offers valuable insights into the conformational behavior of mechanically interlocked ring polymers, highlighting challenges in extrapolating single-molecule analyses to larger networks such as kDNA.

3.
ACS Nano ; 17(24): 24790-24801, 2023 Dec 26.
Artigo em Inglês | MEDLINE | ID: mdl-38047918

RESUMO

In side-chain liquid crystal polymers (SCLCPs), short side chains are attached on a flexible polymer backbone, and each side chain can have a liquid crystal (LC) group attached at the final bead in either an end-on or a side-on configuration. SCLCPs with random sequences of end-on and side-on LC moieties exhibit nonmonotonic thermal behavior as a function of composition, with some mixed sequences having a lower isotropic to LC phase transition than either purely end-on or side-on configurations. The origin of this nonmonotonic thermal trend lies in the disruption of molecular-level positional ordering and alignment due to the different preferred types of ordering of the different LC attachment types. We compare coarse-grained molecular dynamics (MD) simulations and experiments on SCLCP systems with only one type of LC moiety and demonstrate qualitative agreement in the observed mesophases of end-on and side-on SCLCP systems. Specifically, end-on SCLCPs display a smectic B-like mesophase, with layers of polymer between LC layers, while side-on SCLCPs exhibit a quasi-hexagonal columnar structure of polymer and a nematic surrounding the LC mesophase. Detailed analysis of SCLCP systems with various compositions of these types of LC attachments via MD reveals structural disruption in systems with intermediate compositions. Simulation snapshots and anisotropy ratio measurements show how random SCLCP systems deviate from the expected behavior of prolate or oblate systems in terms of their conformation. This molecular disruption in random SCLCP systems, particularly with a high composition of side-on LC moieties, also significantly impacts the relaxation dynamics. Modifying the composition of the LC type of attachment (molecular structure) is a possible route to tuning both the phase behavior and mechanical response of these systems.

4.
Int J Psychol Res (Medellin) ; 16(2): 87-104, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-38106963

RESUMO

While subcellular components of cognition and affectivity that involve the interaction between experience, environment, and physiology -such as learning, trauma, or emotion- are being identified, the physical mechanisms of phenomenal consciousness remain more elusive. We are interested in exploring whether ancient, simpler organisms such as nematodes have minimal consciousness. Is there something that feels like to be a worm? Or are worms blind machines? 'Simpler' models allow us to simultaneously extract data from multiple levels such as slow and fast neural dynamics, structural connectivity, molecular dynamics, behavior, decision making, etc., and thus, to test predictions of the current frameworks in dispute. In the present critical review, we summarize the current models of consciousness in order to reassess in light of the new evidence whether Caenorhabditis elegans, a nematode with a nervous system composed of 302 neurons, has minimal consciousness. We also suggest empirical paths to further advance consciousness research using C. elegans.


Mientras que los componentes subcelulares de fenómenos cognitivos y afectivos que involucran la interacción entre experiencia, ambiente y fisiología -tales como aprendizaje, trauma, o emociones- son identificados con cada vez mayor detalle, los mecanismos biofísicos de la consciencia fenoménica permanecen elusivos. Nos interesa explorar si organismos sencillos como los nemátodos presentan consciencia mínima. ¿Hay algo que se sienta como ser un gusano? ¿O acaso los gusanos son máquinas carentes de toda experiencia? Los modelos "sencillos" nos permiten extraer datos de múltiples niveles en simultáneo: dinámica neuronal rápida y lenta, conectividad estructural, dinámica molecular, conducta, toma de decisiones, etc., y así testear predicciones de las propuestas teóricas actuales en disputa. En esta revisión compendiamos los modelos actuales de consciencia para evaluar, considerando la evidencia reciente, si Caenorhabditis elegans, un nemátodo con un sistema nervioso de 302 neuronas, tiene consciencia mínima. Sugerimos además vías empíricas para desarrollar investigaciones en consciencia utilizando C. elegans.

5.
J Chem Phys ; 158(22)2023 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-37290072

RESUMO

Mesogens, which are typically stiff rodlike or disklike molecules, are able to self-organize into liquid crystal (LC) phases in a certain temperature range. Such mesogens, or LC groups, can be attached to polymer chains in various configurations including within the backbone (main-chain LC polymers) or at the ends of side-chains attached to the backbone in an end-on or side-on configuration (side-chain LC polymers or SCLCPs), which can display synergistic properties arising from both their LC and polymeric character. At lower temperatures, chain conformations may be significantly altered due to the mesoscale LC ordering; thus, when heated from the LC ordered state through the LC to isotropic phase transition, the chains return from a more stretched to a more random coil conformation. This can cause macroscopic shape changes, which depend significantly on the type of LC attachment and other architectural properties of the polymer. Here, to study the structure-property relationships for SCLCPs with a range of different architectures, we develop a coarse-grained model that includes torsional potentials along with LC interactions of a Gay-Berne form. We create systems of different side-chain lengths, chain stiffnesses, and LC attachment types and track their structural properties as a function of temperature. Our modeled systems indeed form a variety of well-organized mesophase structures at low temperatures, and we predict higher LC-to-isotropic transition temperatures for the end-on side-chain systems than for analogous side-on side-chain systems. Understanding these phase transitions and their dependence on polymer architecture can be useful in designing materials with reversible and controllable deformations.


Assuntos
Cristais Líquidos , Cristais Líquidos/química , Polímeros/química , Temperatura de Transição , Transição de Fase , Temperatura
8.
Rev. Estomat ; 9(1): 3-3, jul. 2000.
Artigo em Espanhol | LILACS | ID: lil-569550
9.
Rev. Estomat ; 9(1): 33-38, jul. 2000. ilus
Artigo em Espanhol | LILACS | ID: lil-569556

RESUMO

The dental picture can constitute a very valuable tool for students, professors as well as for the dentists in general. For example it is good for the illustration of a discovery or a series of observations, documentation of the conditions of "before and later" of a treatment, contribution to the teaching to take registrations and as an assistant in the transmission of knowledge, campaigns in schools or social centers and even as legal protection, because a series of good pictures serves like evidence of the patient's conditions before, during and after the dental treatment. The purpose of the following article is to motivate and to guide to the dentist for the obtaining of dental pictures of quality helping to the selection of the required tools as well as of transmitting him some photographic advice to get the required good results.


Assuntos
Fotografia Dentária , Câmaras , Lentes
11.
Rev. Estomat ; 5(1): 40-44, jun. 1995. ilus
Artigo em Espanhol | LILACS | ID: lil-569879

RESUMO

El blanqueamiento de dientes no vitales se reporta en la literatura desde el año 1800. Se han utilizado diferentes sustancias que van desde la composición netamente ácida de los agentes blanqueadores, como el ácido oxálico, hasta las sustancias oxigenantes que se utilizan en la actualidad. Por otro lado, las diferentes técnicas que se han desarrollado, han mostrado resultados satisfactorios en la mayoría de los casos, en el momento inmediato. Sólo hasta ahora se están empezando a reportar casos de reabsorción cervical externa post-blanqueamiento, incluso hasta los siete años después de haber sido realizado el procedimiento. Con el presente artículo, se pretende revisar la evolución histórica del blanqueamiento en dientes no vitales, referente a las sustancias utilizadas; diferentes técnicas usadas y lo que es más importante, los riesgos que se pueden presentar a largo plazo en una técnica agresiva y no por esto poco usada.


Bleaching of non-vital teeth is reportin the literature since the year 1800. Diferent substances have been used going from net acid composition of bleanching agents like Oxalic acid, to oxigenated liquids used today. By other pand, diferent technique developed, have shown satisfactory results in the majority of cases in the inmediate moment. Only until today, cases of external cervical resorption after bleanching are begining to be reported including after seven years at the procedure had been perfomed. The purpose of the present article is to review the historical evolution of the nonvital teeth bleaching, diferent substances, technics and the long term risks that could appear with a agresive technic, but not by this seldom used today.


Assuntos
Temperatura Alta , Peróxido de Hidrogênio , Clareamento Dental , Descoloração de Dente
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