Microplastics in the insular marine environment of the Southwest Indian Ocean carry a microbiome including antimicrobial resistant (AMR) bacteria: A case study from Reunion Island.

The increasing threats to ecosystems and humans from marine plastic pollution require a comprehensive assessment. We present a plastisphere case study from Reunion Island, a remote oceanic island located in the Southwest Indian Ocean, polluted by plastics. We characterized the plastic pollution on the island's coastal waters, described the associated microbiome, explored viable bacterial flora and the presence of antimicrobial resistant (AMR) bacteria. Reunion Island faces plastic pollution with up to 10,000 items/km2 in coastal water. These plastics host microbiomes dominated by Proteobacteria (80 %), including dominant genera such as Psychrobacter, Photobacterium, Pseudoalteromonas and Vibrio. Culturable microbiomes reach 107 CFU/g of microplastics, with dominance of Exiguobacterium and Pseudomonas. Plastics also carry AMR bacteria including ß-lactam resistance. Thus, Southwest Indian Ocean islands are facing serious plastic pollution. This pollution requires vigilant monitoring as it harbors a plastisphere including AMR, that threatens pristine ecosystems and potentially human health through the marine food chain.

New insights into the diversity of cryptobenthic Cirripectes blennies in the Mascarene Archipelago sampled using Autonomous Reef Monitoring Structures (ARMS).

Autonomous Reef Monitoring Structures (ARMS) are artificial mini-reefs designed for standardized sampling of sessile and small motile cryptobenthic organisms. ARMS are also effective for collecting small cryptobenthic fishes, such as the combtooth blennies of the genus Cirripectes. Recent studies discovered several Cirripectes species endemic to islands or archipelagos, in spite of the generally broad distributions of tropical and subtropical blennies. Thus, to evaluate the diversity and distribution of Cirripectes species in the Mascarene Archipelago, a little-studied region but an important biodiversity hotspot, complete mitochondrial genomes, and nuclear rhodopsin genes were sequenced for 39 specimens collected with ARMS deployed on outer reef slopes at Reunion and Rodrigues islands. Mitochondrial COI sequences were analyzed to integrate these specimens within the largest dataset of publicly available sequences. Three species were found in the Mascarene Archipelago, Cirripectes castaneus, Cirripectes randalli, and Cirripectes stigmaticus. C. castaneus and C. stigmaticus both have an Indo-Pacific distribution with several haplotypes shared among distant localities. In agreement with the literature, C. randalli shows a small-range endemism restricted to the Mascarenes. We confirmed the presence of C. castaneus, C. randalli, and C. stigmaticus in Rodrigues, and the presence of C. stigmaticus in Reunion. This study contributes to filling the gaps in taxonomic and molecular knowledge of the reef cryptobiome in the South-West Indian Ocean, and provides the first complete mitogenomes for the genus, a crucial step for future molecular-based inventories (e.g., eDNA).

Diversity, structure and demography of coral assemblages on underwater lava flows of different ages at Reunion Island and implications for ecological succession hypotheses.

Understanding colonization of new habitats and ecological successions is key to ecosystem conservation. However, studies on primary successions are scarce for reef-building corals, due to the rarity of newly formed substratum and the long-term monitoring efforts required for their long life cycle and slow growth rate. We analysed data describing the diversity, structure and demography of coral assemblages on lava flows of different ages and coral reefs at Reunion Island, to evaluate the strength and mechanisms of succession, and its agreement to the theoretical models. No significant differences were observed between the two habitats for most structure and demographic descriptors. In contrast, species richness and composition differentiated coral reefs from lava flows, but were not related to the age of the lava flow. We observed a strong dominance of Pocillopora colonies, which underline the opportunistic nature of this taxa, with life-history traits advantageous to dominance on primary and secondary successional stages. Although some results argue in favor of the tolerance model of succession, the sequences of primary successions as theorized in other ecosystems were difficult to observe, which is likely due to the high frequency and intensity of disturbances at Reunion, that likely distort or set back the expected successional sequences.

Multiscale variability in coral recruitment in the Mascarene Islands: From centimetric to geographical scale.

Coral recruitment refers to the processes allowing maintenance and renewal of coral communities. Recruitment success is therefore indispensable for coral reef recovery after disturbances. Recruitment processes are governed by a variety of factors occurring at all spatial and temporal scales, from centimetres to hundreds of kilometres. In the present context of rising disturbances, it is thus of major importance to better understand the relative importance of different scales in this variation, and when possible, the factors associated with these scales. Multiscale spatio-temporal variability of scleractinian coral recruitment was investigated at two of the Mascarene Islands: Reunion and Rodrigues. Recruitment rates and taxonomic composition were examined during three consecutive six-month periods from regional to micro-local scales (i.e. from hundreds of kilometres to few centimetres) and between two protection levels (no-take zones and general protection zones). Very low recruitment rates were observed. Rodrigues displayed lower recruitment rates than Reunion. Recruit assemblage was dominated by Pocilloporidae (77.9%), followed by Acroporidae (9.9%) and Poritidae (5.2%). No protection effect was identified on coral recruitment, despite differences in recruitment rates among sites within islands. Recruits were patchily distributed within sites but no aggregative effect was detected, i.e. the preferentially colonised tiles were not spatially grouped. Recruits settled mainly on the sides of the tiles, especially at Rodrigues, which could be attributed to the high concentration of suspended matter. The variability of recruitment patterns at various spatial scales emphasises the importance of micro- to macro-local variations of the environment in the dynamics and maintenance of coral populations. High temporal variability was also detected, between seasons and years, which may be related to the early 2016 bleaching event at Rodrigues. The low recruitment rates and the absence of protection effect raise questions about the potential for recovery from disturbances of coral reefs in the Mascarene Islands.

Superclone Expansion, Long-Distance Clonal Dispersal and Local Genetic Structuring in the Coral Pocillopora damicornis Type ß in Reunion Island, South Western Indian Ocean.

The scleractinian coral Pocillopora damicornis type ß is known to present a mixed reproduction mode: through sexual reproduction, new genotypes are created, while asexual reproduction insures their propagation. In order to investigate the relative proportion of each reproduction mode in P. damicornis type ß populations from Reunion Island, Indian Ocean, clonal propagation along the west coast was assessed through four sampling sites with increasing geographical distance between sites. Coral colonies were sampled either exhaustively, randomly or haphazardly within each site, and genotypic diversity was assessed using 13 microsatellite loci over a total of 510 P. damicornis type ß determined a posteriori from their mtDNA haplotype (a 840 bp sequenced fragment of the Open Reading Frame). Overall, 47% of all the sampled colonies presented the same multi-locus genotype (MLG), a superclone, suggesting that asexual propagation is extremely important in Reunion Island. Within each site, numerous MLGs were shared by several colonies, suggesting local clonal propagation through fragmentation. Moreover, some of these MLGs were found to be shared among several sites located 40 km apart. While asexual reproduction by fragmentation seems unlikely over long distances, our results suggest a production of parthenogenetic larvae. Despite shared MLGs, two differentiated clusters were enclosed among populations of the west coast of Reunion Island, revealing the necessity to set up appropriate managing strategies at a local scale.