Efficient single-scattering lookup table for lidar and polarimeter phytoplankton studies.

Coupled atmosphere and ocean remote sensing retrievals of aerosol, cloud, and oceanic phytoplankton microphysical properties, such as those carried out by the NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) mission, involve single-scattering calculations that are time consuming. Lookup tables (LUTs) exist to speed up these calculations for aerosol and water droplets in the atmosphere. In our new Lorenz-Mie lookup table, we tabulate single scattering by an ensemble of coated isotropic spheres representing oceanic phytoplankton at wavelengths from 0.355 µm. The lookup table covers phytoplankton particles with radii in the range of 0.15-100 µm at an increase of up to 104 in computational speed compared to single-scattering calculations. The allowed complex refractive indices range from 1.05 to 1.24 for the shell's real part, from 10-7 to 0.3 for the shell's imaginary part, from 0 to 0.001 for the core's imaginary part, and equal to 1.02 for the core's real part. We show that we precisely compute inherent optical properties for the phytoplankton size distributions ranging up to 5 µm for the effective radius and up to 0.6 for the effective variance. We test wavelengths from 0.355 to 1.065 µm and find that all the inherent optical properties of interest agree with the single-scattering calculations to within 1% for 99.9% of cases. We also provide an example of using the lookup table to reproduce the phytoplankton optical datasets listed in the PANGAEA database for synthetic hyperspectral algorithm development. The table together with C++, Fortran, MATLAB, and Python codes to apply different complex refractive indices and phytoplankton size distributions is freely available online.

Efficient single-scattering look-up table for lidar and polarimeter water cloud studies.

Combined lidar and polarimeter retrievals of aerosol, cloud, and ocean microphysical properties involve single-scattering cloud calculations that are time consuming. We create a look-up table to speed up these calculations for water droplets in the atmosphere. In our new Lorenz-Mie look-up table we tabulate the light scattering by an ensemble of homogeneous isotropic spheres at wavelengths starting from 0.35 µm. The look-up table covers liquid water cloud particles with radii in the range of 0.001-500 µm while gaining an increase of up to 104 in computational speed. The covered complex refractive indices range from 1.25 to 1.36 for the real part and from 0 to 0.001 for the imaginary part. We show that we can precisely compute inherent optical properties for the particle size distributions ranging up to 100 µm for the effective radius and up to 0.6 for the effective variance. We test wavelengths from 0.35 to 2.3 µm and find that the elements of the normalized scattering matrix as well as the asymmetry parameter, the absorption, backscatter, extinction, and scattering coefficients are precise to within 1% for 96.7%-100% of cases depending on the inherent optical property. We also provide an example of using the look-up table with in situ measurements to determine agreement with remote sensing. The table together with C++, Fortran, MATLAB, and Python codes to interpolate the complex refractive index and apply different particle size distributions are freely available online.

Observations of supermicron-sized aerosols originating from biomass burning in southern Central Africa.

During the 3 years of the ObseRvations of Aerosols above CLouds and their intEractionS (ORACLES) campaign, the NASA Orion P-3 was equipped with a 2D stereo (2D-S) probe that imaged particles with maximum dimension (D) ranging from 10 < D < 1280 µm. The 2D-S recorded supermicron-sized aerosol particles (SAPs) outside of clouds within biomass burning plumes during flights over the southeastern Atlantic off Africa's coast. Numerous SAPs with 10 < D < 1520 µm were observed in 2017 and 2018 at altitudes between 1230 and 4000 m, 1000 km from the coastline, mostly between 7-11° S. No SAPs were observed in 2016 as flights were conducted further south and further from the coastline. Number concentrations of refractory black carbon (rBC) measured by a single particle soot photometer ranged from 200 to 1200 cm-3 when SAPs were observed. Transmission electron microscopy images of submicron particulates, collected on Holey carbon grid filters, revealed particles with potassium salts, black carbon (BC), and organics. Energy-dispersive X-ray spectroscopy spectra also detected potassium, a tracer for biomass burning. These measurements provided evidence that the submicron particles originated from biomass burning. NOAA Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) 3 d back trajectories show a source in northern Angola for times when large SAPs were observed. Fire Information for Resource Management System (FIRMS) Moderate Resolution Imaging Spectroradiometer (MODIS) 6 active fire maps showed extensive biomass burning at these locations. Given the back trajectories, the high number concentrations of rBC, and the presence of elemental tracers indicative of biomass burning, it is hypothesized that the SAPs imaged by the 2D-S are examples of BC aerosol, ash, or unburned plant material.

Quantifying the direct radiative effect of absorbing aerosols for numerical weather prediction: a case study.

We conceptualize aerosol radiative transfer processes arising from the hypothetical coupling of a global aerosol transport model and a global numerical weather prediction model by applying the US Naval Research Laboratory Navy Aerosol Analysis and Prediction System (NAAPS) and the Navy Global Environmental Model (NAVGEM) meteorological and surface reflectance fields. A unique experimental design during the 2013 NASA Studies of Emissions and Atmospheric Composition, Clouds and Climate Coupling by Regional Surveys (SEAC4RS) field mission allowed for collocated airborne sampling by the high spectral resolution Lidar (HSRL), the Airborne Multi-angle SpectroPolarimetric Imager (AirMSPI), up/down shortwave (SW) and infrared (IR) broadband radiometers, as well as NASA A-Train support from the Moderate Resolution Imaging Spectroradiometer (MODIS), to attempt direct aerosol forcing closure. The results demonstrate the sensitivity of modeled fields to aerosol radiative fluxes and heating rates, specifically in the SW, as induced in this event from transported smoke and regional urban aerosols. Limitations are identified with respect to aerosol attribution, vertical distribution, and the choice of optical and surface polarimetric properties, which are discussed within the context of their influence on numerical weather prediction output that is particularly important as the community propels forward towards inline aerosol modeling within global forecast systems.

Airborne and shipborne polarimetric measurements over open ocean and coastal waters: intercomparisons and implications for spaceborne observations.

Comprehensive polarimetric closure is demonstrated using observations from two in-situ polarimeters and Vector Radiative Transfer (VRT) modeling. During the Ship-Aircraft Bio-Optical Research (SABOR) campaign, the novel CCNY HyperSAS-POL polarimeter was mounted on the bow of the R/V Endeavor and acquired hyperspectral measurements from just above the surface of the ocean, while the NASA GISS Research Scanning Polarimeter was deployed onboard the NASA LaRC's King Air UC-12B aircraft. State-of-the-art, ancillary measurements were used to characterize the atmospheric and marine contributions in the VRT model, including those of the High Spectral Resolution Lidar (HSRL), the AErosol RObotic NETwork for Ocean Color (AERONET-OC), a profiling WETLabs ac-9 spectrometer and the Multi-spectral Volume Scattering Meter (MVSM). An open-ocean and a coastal scene are analyzed, both affected by complex aerosol conditions. In each of the two cases, it is found that the model is able to accurately reproduce the Stokes components measured simultaneously by each polarimeter at different geometries and viewing altitudes. These results are mostly encouraging, considering the different deployment strategies of RSP and HyperSAS-POL, which imply very different sensitivities to the atmospheric and ocean contributions, and open new opportunities in above-water polarimetric measurements. Furthermore, the signal originating from each scene was propagated to the top of the atmosphere to explore the sensitivity of polarimetric spaceborne observations to changes in the water type. As expected, adding polarization as a measurement capability benefits the detection of such changes, reinforcing the merits of the full-Stokes treatment in modeling the impact of atmospheric and oceanic constituents on remote sensing observations.

Retrieval of aerosol parameters from multiwavelength lidar: investigation of the underlying inverse mathematical problem.

We present an investigation of some important mathematical and numerical features related to the retrieval of microphysical parameters [complex refractive index, single-scattering albedo, effective radius, total number, surface area, and volume concentrations] of ambient aerosol particles using multiwavelength Raman or high-spectral-resolution lidar. Using simple examples, we prove the non-uniqueness of an inverse solution to be the major source of the retrieval difficulties. Some theoretically possible ways of partially compensating for these difficulties are offered. For instance, an increase in the variety of input data via combination of lidar and certain passive remote sensing instruments will be helpful to reduce the error of estimation of the complex refractive index. We also demonstrate a significant interference between Aitken and accumulation aerosol modes in our inversion algorithm, and confirm that the solutions can be better constrained by limiting the particle radii. Applying a combination of an analytical approach and numerical simulations, we explain the statistical behavior of the microphysical size parameters. We reveal and clarify why the total surface area concentration is consistent even in the presence of non-unique solution sets and is on average the most stable parameter to be estimated, as long as at least one extinction optical coefficient is employed. We find that for selected particle size distributions, the total surface area and volume concentrations can be quickly retrieved with fair precision using only single extinction coefficients in a simple arithmetical relationship.

Arrange and average algorithm for the retrieval of aerosol parameters from multiwavelength high-spectral-resolution lidar/Raman lidar data.

We present the results of a feasibility study in which a simple, automated, and unsupervised algorithm, which we call the arrange and average algorithm, is used to infer microphysical parameters (complex refractive index, effective radius, total number, surface area, and volume concentrations) of atmospheric aerosol particles. The algorithm uses backscatter coefficients at 355, 532, and 1064 nm and extinction coefficients at 355 and 532 nm as input information. Testing of the algorithm is based on synthetic optical data that are computed from prescribed monomodal particle size distributions and complex refractive indices that describe spherical, primarily fine mode pollution particles. We tested the performance of the algorithm for the "3 backscatter (ß)+2 extinction (α)" configuration of a multiwavelength aerosol high-spectral-resolution lidar (HSRL) or Raman lidar. We investigated the degree to which the microphysical results retrieved by this algorithm depends on the number of input backscatter and extinction coefficients. For example, we tested "3ß+1α," "2ß+1α," and "3ß" lidar configurations. This arrange and average algorithm can be used in two ways. First, it can be applied for quick data processing of experimental data acquired with lidar. Fast automated retrievals of microphysical particle properties are needed in view of the enormous amount of data that can be acquired by the NASA Langley Research Center's airborne "3ß+2α" High-Spectral-Resolution Lidar (HSRL-2). It would prove useful for the growing number of ground-based multiwavelength lidar networks, and it would provide an option for analyzing the vast amount of optical data acquired with a future spaceborne multiwavelength lidar. The second potential application is to improve the microphysical particle characterization with our existing inversion algorithm that uses Tikhonov's inversion with regularization. This advanced algorithm has recently undergone development to allow automated and unsupervised processing; the arrange and average algorithm can be used as a preclassifier to further improve its speed and precision. First tests of the performance of arrange and average algorithm are encouraging. We used a set of 48 different monomodal particle size distributions, 4 real parts and 15 imaginary parts of the complex refractive index. All in all we tested 2880 different optical data sets for 0%, 10%, and 20% Gaussian measurement noise (one-standard deviation). In the case of the "3ß+2α" configuration with 10% measurement noise, we retrieve the particle effective radius to within 27% for 1964 (68.2%) of the test optical data sets. The number concentration is obtained to 76%, the surface area concentration to 16%, and the volume concentration to 30% precision. The "3ß" configuration performs significantly poorer. The performance of the "3ß+1α" and "2ß+1α" configurations is intermediate between the "3ß+2α" and the "3ß."

Prospective comparison of state-of-the-art MR enterography and CT enterography in small-bowel Crohn's disease.

OBJECTIVE: The objective of our study was to prospectively obtain pilot data on the accuracy of MR enterography for detecting small-bowel Crohn's disease compared with CT enterography and with a clinical reference standard based on imaging, clinical information, and ileocolonoscopy. SUBJECTS AND METHODS: The study group for this blinded prospective study was composed of 33 patients with suspected active Crohn's ileal inflammation who were scheduled for clinical CT enterography and ileocolonoscopy and had consented to also undergo MR enterography. The MR enterography and CT enterography examinations were each interpreted by two radiologists with disagreements resolved by consensus. The reports from ileocolonoscopy with or without mucosal biopsy were interpreted by a gastroenterologist. The reference standard for the presence of small-bowel Crohn's disease was based on the final clinical diagnosis by the referring gastroenterologist after reviewing all of the available information. RESULTS: All 33 patients underwent CT enterography and ileocolonoscopy, 30 of whom also underwent MR enterography. The sensitivities of MR enterography and CT enterography for detecting active small-bowel Crohn's disease were similar (90.5% vs 95.2%, respectively; p = 0.32). The image quality scores for MR enterography examinations were significantly lower than those for CT enterography (p = 0.005). MR enterography and CT enterography identified eight cases (24%) with a final diagnosis of active small-bowel inflammation in which the ileal mucosa appeared normal at ileocolonoscopy. Furthermore, enterography provided the only available imaging in three additional patients who did not have ileal intubation. CONCLUSION: MR enterography and CT enterography have similar sensitivities for detecting active small-bowel inflammation, but image quality across the study cohort was better with CT. Cross-sectional enterography provides complementary information to ileocolonoscopy.

Obscure gastrointestinal bleeding: evaluation with 64-section multiphase CT enterography--initial experience.

This retrospective HIPAA-compliant study was approved by the institutional review board and institutional conflict of interest committee. Patients gave informed consent for use of medical records. The purpose of the study was to retrospectively evaluate the findings depicted at computed tomographic (CT) enterography performed with a 64-section CT system and by using neutral enteric contrast material and a three-phase acquisition in patients with obscure gastrointestinal bleeding (OGIB). Twenty-two outpatients (11 men, 11 women; age range, 37-83 years) with OGIB underwent CT enterography. Findings were compared with capsule and traditional endoscopic, surgical, and angiographic findings. CT enterographic findings were positive for a bleeding source in 10 (45%) of 22 patients. Eight of 10 positive findings at CT enterography were also positive at capsule endoscopy or subsequent clinical diagnosis. CT enterography helped correctly identify three lesions undetected at capsule endoscopy. Study results suggest that multiphase, multiplanar CT enterography may have a role in the evaluation of OGIB.