Cessation of grazing causes biodiversity loss and homogenization of soil food webs.

There is widespread concern that cessation of grazing in historically grazed ecosystems is causing biotic homogenization and biodiversity loss. We used 12 montane grassland sites along an 800 km north-south gradient across the UK, to test whether cessation of grazing affects local α- and ß-diversity of below-ground food webs. We show cessation of grazing leads to strongly decreased α-diversity of most groups of soil microbes and fauna, particularly of relatively rare taxa. By contrast, the ß-diversity varied between groups of soil organisms. While most soil microbial communities exhibited increased homogenization after cessation of grazing, we observed decreased homogenization for soil fauna after cessation of grazing. Overall, our results indicate that exclusion of domesticated herbivores from historically grazed montane grasslands has far-ranging negative consequences for diversity of below-ground food webs. This underscores the importance of grazers for maintaining the diversity of below-ground communities, which play a central role in ecosystem functioning.

Topoclimate effect on treeline elevation depends on the regional framework: A contrast between Southern Alps (New Zealand) and Apennines (Italy) forests.

Deciphering the spatial patterns of alpine treelines is critical for understanding the ecosystem processes involved in the persistence of tree species and their altitudinal limit. Treelines are thought to be controlled by temperature, and other environmental variables but they have rarely been investigated in regions with different land-use change legacies. Here, we systematically investigated treeline elevation in the Apennines (Italy) and Southern Alps (New Zealand) with contrasting human history but similar biogeographic trajectories, intending to identify distinct drivers that affect their current elevation and highlight their respective peculiarities. Over 3622 km of Apennines, treeline elevation was assessed in 302 mountain peaks and in 294 peaks along 4504 km of Southern Alps. The major difference between the Southern Alps and Apennines treeline limit is associated with their mountain aspects. In the Southern Alps, the scarcely anthropized Nothofagus treeline elevation was higher on the warmer equator-facing slopes than on the pole-facing ones. Contrary to what would be expected based on temperature limitation, the elevation of Fagus sylvatica treelines in the Apennines was higher on colder, pole-facing slopes than on human-shaped equator-facing, warmer mountainsides. Pervasive positive correlations were found between treeline elevation and temperature in the Southern Alps but not in the Apennines. While the position of the Fagus and Nothofagus treelines converge on similar isotherms of annual average temperature, a striking isothermal difference between the temperatures of the hottest month on which the two taxonomic groups grow exists. We conclude that actual treeline elevation reflects the ecological processes driven by a combination of local-scale topoclimatic conditions, and human disturbance legacy. Predicting dynamic processes affecting current and future alpine treeline position requires further insight into the modulating influences that are currently understood at a regional scale.

Leading trait dimensions in flood-tolerant plants.

BACKGROUND AND AIMS: While trait-based approaches have provided critical insights into general plant functioning, we lack a comprehensive quantitative view on plant strategies in flooded conditions. Plants adapted to flooded conditions have specific traits (e.g. root porosity, low root/shoot ratio and shoot elongation) to cope with the environmental stressors including anoxic sediments, and the subsequent presence of phytotoxic compounds. In flooded habitats, plants also respond to potential nutrient and light limitations, e.g. through the expression of leaf economics traits and size-related traits, respectively. However, we do not know whether and how these trait dimensions are connected. METHODS: Based on a trait dataset compiled on 131 plant species from 141 studies in flooded habitats, we quantitatively analysed how flooding-induced traits are positioned in relation to the other two dominant trait dimensions: leaf economics traits and size-related traits. We evaluated how these key trait components are expressed along wetness gradients, across habitat types and among plant life forms. KEY RESULTS: We found that flooding-induced traits constitute a trait dimension independent from leaf economics traits and size-related traits, indicating that there is no generic trade-off associated with flooding adaptations. Moreover, individual flooding-induced traits themselves are to a large extent decoupled from each other. These results suggest that adaptation to stressful environments, such as flooding, can be stressor specific without generic adverse effects on plant functioning (e.g. causing trade-offs on leaf economics traits). CONCLUSIONS: The trait expression across multiple dimensions promotes plant adaptations and coexistence across multifaceted flooded environments. The decoupled trait dimensions, as related to different environmental drivers, also explain why ecosystem functioning (including, for example, methane emissions) are species and habitat specific. Thus, our results provide a backbone for applying trait-based approaches in wetland ecology by considering flooding-induced traits as an independent trait dimension.

Environmental DNA metabarcoding reveals comparable responses to agricultural stressors on different trophic levels of a freshwater community.

Freshwater habitats are under stress from agricultural land use, most notably the influx of neonicotinoid pesticides and increased nutrient pressure from fertilizer. Traditional studies investigating the effects of stressors on freshwater systems are often limited to a narrow range of taxa, depending heavily on morphological expertise. Additionally, disentanglement of multiple simultaneous stressors can be difficult in field studies, whereas controlled laboratory conditions do not accurately reflect natural conditions and food webs. To overcome these drawbacks, we investigated the impacts of two agricultural stressors (the neonicotinoid insecticide thiacloprid and fertilizer) in full-factorial design in a semi-natural research site, using environmental DNA sampling to study three different taxonomic groups representing three trophic levels: bacteria (decomposers), phytoplankton (primary producers), and chironomids (consumers). The results show considerable impact of both stressors across trophic levels, with an additive effect of fertilizer and thiacloprid on community composition at all levels. These findings suggest that agricultural stressors affect the entire food web, either directly or through cascade reactions. They are also consistent with morphological assessments that were performed in the same study site, even at a lower number of replicates. The study presented shows that the use of multimarker environmental DNA provides a more comprehensive assessment of stressor impacts across multiple trophic levels, at a higher taxonomic resolution than traditional surveys. Additionally, many putative novel bioindicators for both agricultural stressors were discovered. We encourage further investigations into stressors impacts at different trophic levels, which will lead to more effective monitoring and management of freshwater systems.

Global analysis of trait-trait relationships within and between species.

Some commonly reported trait-trait relationships between species, including the leaf economic spectrum (LES), are regarded as important plant strategies but whether these relationships represent plant strategies in reality remains unclear. We propose a novel approach to distinguish trait-trait relationships between species that may represent plant strategies vs those relationships that are the result of common drivers, by comparing the direction and strength of intraspecific trait variation (ITV) vs interspecific trait variation. We applied this framework using a unique global ITV database that we compiled, which included 11 traits related to LES, size and roots, and observations from 2064 species occurring in 1068 communities across 19 countries. Generally, compared to between species, trait-trait relationships within species were much weaker or totally disappeared. Almost only within the LES traits, the between-species trait-trait relationships were translated into positive relationships within species, which suggests that they may represent plant strategies. Moreover, the frequent coincidental trait-trait relationships between species, driven by co-varying common drivers, imply that in future research, decoupling of trait-trait relationships should be considered seriously in model projections of ecosystem functioning. Our study emphasizes the importance of describing the mechanisms behind trait-trait relationships, both between and within species, for deepening our understanding of general plant strategies.

Importance of natural land cover for plant species' conservation: A nationwide study in The Netherlands.

While shifts to high-intensity land cover have caused overwhelming biodiversity loss, it remains unclear how important natural land cover is to the occurrence, and thus the conservation, of different species groups. We used over 4 million plant species' observations to evaluate the conservation importance of natural land cover by its association with the occurrence probability of 1 122 native and 403 exotic plant species at 1 km resolution by species distribution models. We found that 74.9% of native species, 83.9% of the threatened species and 77.1% rare species preferred landscapes with over 50% natural land cover, while these landscapes only accounted for 15.6% of all grids. Most species preferred natural areas with a mixture of forest and open areas rather than areas with completely open or forested nature. Compared to native species, exotic species preferred areas with lower natural land cover and the cover of natural open area, but they both preferred extremely high and low cover of natural forest area. Threatened and rare species preferred higher natural land cover, either cover of natural forest area or cover of natural open area than not threatened and common species, but rare species were also more likely to occur in landscapes with 0-25% cover of natural open area. Although more natural land cover in a landscape will not automatically result in more native species, because there is often a non-linear increase in species occurrence probability when going from 0% to 100% natural land cover, for conserving purposes, over 80% natural land cover should be kept in landscapes for conserving threatened and very rare species, and 60% natural land cover is the best for conserving common native species. Our results stress the importance of natural areas for plant species' conservation. It also informs improvements to species conservation by increasing habitat diversity.

Global patterns of the leaf economics spectrum in wetlands.

The leaf economics spectrum (LES) describes consistent correlations among a variety of leaf traits that reflect a gradient from conservative to acquisitive plant strategies. So far, whether the LES holds in wetland plants at a global scale has been unclear. Using data on 365 wetland species from 151 studies, we find that wetland plants in general show a shift within trait space along the same common slope as observed in non-wetland plants, with lower leaf mass per area, higher leaf nitrogen and phosphorus, faster photosynthetic rates, and shorter leaf life span compared to non-wetland plants. We conclude that wetland plants tend to cluster at the acquisitive end of the LES. The presented global quantifications of the LES in wetland plants enhance our understanding of wetland plant strategies in terms of resources acquisition and allocation, and provide a stepping-stone to developing trait-based approaches for wetland ecology.

Variability in fish bioconcentration factors: Influences of study design and consequences for regulation.

The fish bioconcentration factor (BCF) is an important aspect within bioaccumulation assessments. Several factors have been suggested to influence BCF values - including species, developmental stage, mixture exposure, and calculation method. However, their exact contribution to variance in BCF values is unknown. Within this study we assessed the relative impact of these test characteristics on BCF values and analyzed the reproducibility of aquatic exposure bioconcentration tests. Linear mixed effects analyses were performed on a newly develop database to investigate the relationship between the response variable (i.e. lipid normalized log BCF values) and several test characteristics as fixed effects. Lower BCF values were observed for substances that were simultaneously applied with high molecular weight polycyclic aromatic hydrocarbons compared to single substance exposure (with an average difference of -0.81 log BCF). Also, lower BCFs upon kinetic determination were observed compared to steady-state BCFs (log BCF -0.27), and lower BCFs for species from the Ostariophysi subcohort level (log BCF -0.17 to -0.15). In addition, data analysis showed high variation within BCF values for single substances (average SD = log BCF 0.21), which questions the robustness of the current bioaccumulation assessments. For example, the 95% confidence range of a BCF value of 2500 ranges from 953 ('not-bioaccumulative') to 6561 ('very bioaccumulative'). Our results show that the use of one single BCF leads to a high uncertainty in bioaccumulation assessments. We strongly recommend that within future bioconcentration studies, the used experimental design and test conditions are described in detail and justified to support solid interpretation.

Variation of water use efficiency across seasons and years: Different role of herbaceous plants in desert ecosystem.

Desert ecosystems often structured in two distinct layers of woody and herbaceous plants. Changes in community composition alter the fractional coverage by bare soil, woody and herbaceous plants, with potential effects on water and carbon fluxes. We used eddy covariance measurements and chamber method in two similar shrub-dominated desert communities (Tamarix community and Haloxylon community) to assess inter- and intra-annual variations of ecosystem water use efficiency (EWUE) (where we distinguished whole ecosystem EWUE as EWUEE, and EWUE of shrub and herbaceous layers as EWUEShrub and EWUEHerb) in central Asia. In the Tamarix community, 11 years of carbon and water fluxes showed that years with larger herbaceous cover (referred to as shrub-herb years) had significant higher EWUEE than years with lower herbaceous cover (referred to as shrub years), with the values of 1.07 ±â€¯0.11 vs. 0.68 ±â€¯0.03 g C/kg H2O. There was a significant positive correlation between EWUEE and the maximum herbaceous plants cover. In the Haloxylon community, chamber measurements during a shrub year demonstrated that the shrub layer contributed most to the gross ecosystem productivity (GEP) and evapotranspiration (ET) of the system, with the herbaceous layer contributing around 30% at the beginning of the growing season, and decreasing to nearly zero during the middle and at the end of the growing season. The shrub layer EWUEShrub was significant higher than that in the herbaceous layer (EWUEHerb) throughout the growing season (1.82 ±â€¯0.11 vs. 1.06 ±â€¯0.32 g C/kg H2O). EWUEShrub was positively correlated with EWUEE, but there was no relationship between EWUEHerb and EWUEE in a shrub year. This study shows that the variability of the herbaceous layer across seasons and years in these desert ecosystems is crucial for predicting water and carbon cycling under ongoing and projected climatic change scenarios in shrub-dominated desert ecosystems.

Elevation alters ecosystem properties across temperate treelines globally.

Temperature is a primary driver of the distribution of biodiversity as well as of ecosystem boundaries. Declining temperature with increasing elevation in montane systems has long been recognized as a major factor shaping plant community biodiversity, metabolic processes, and ecosystem dynamics. Elevational gradients, as thermoclines, also enable prediction of long-term ecological responses to climate warming. One of the most striking manifestations of increasing elevation is the abrupt transitions from forest to treeless alpine tundra. However, whether there are globally consistent above- and belowground responses to these transitions remains an open question. To disentangle the direct and indirect effects of temperature on ecosystem properties, here we evaluate replicate treeline ecotones in seven temperate regions of the world. We find that declining temperatures with increasing elevation did not affect tree leaf nutrient concentrations, but did reduce ground-layer community-weighted plant nitrogen, leading to the strong stoichiometric convergence of ground-layer plant community nitrogen to phosphorus ratios across all regions. Further, elevation-driven changes in plant nutrients were associated with changes in soil organic matter content and quality (carbon to nitrogen ratios) and microbial properties. Combined, our identification of direct and indirect temperature controls over plant communities and soil properties in seven contrasting regions suggests that future warming may disrupt the functional properties of montane ecosystems, particularly where plant community reorganization outpaces treeline advance.

Effects of irrigation and addition of nitrogen fertiliser on net ecosystem carbon balance for a grassland.

The ability to quantify the impacts of changing management practices on the components of net ecosystem carbon balance (NB) is required to forecast future changes in soil carbon stocks and potential feedbacks on atmospheric CO2 concentrations. In this study we investigated seasonal changes on the components of net ecosystem carbon balance resulting from the application of irrigation and nitrogen fertiliser to a temperate grassland in New Zealand where we simulated grazing events. We made seasonal measurements of the components of NB using chamber measurements in field plots with and without irrigation and addition of nitrogen fertiliser. We developed models to determine the physiological responses of gross canopy photosynthesis (A), leaf respiration (RL) and soil respiration (RS) to soil and air temperature, soil water content and irradiance and we estimated annual NB for the first year after treatments were applied. Overall, irrigation and nitrogen addition had a synergistic effect to increase annual estimates of above-ground components of carbon balance (A, RL and carbon exported through simulated grazing, Fexport), but there was no effect from adding nitrogen alone. Annual RS remained unchanged between treatments. The treatments resulted in increases in above-ground biomass production, but, with the high intensity of simulated grazing, these were not sufficient to offset ecosystem carbon losses, so all treatments remained a net source of carbon. There were no significant differences between treatments and annual NB ranged from -540gCm-2y-1 for the treatment with no irrigation and no nitrogen addition and -284gCm-2y-1 for the treatment with irrigation and nitrogen addition. Our findings from the first year of the treatments quantify the net benefits of addition of irrigation and nitrogen on increasing above-ground production for animal feed but show that this did not lead to a net increase carbon input to the soil.