Genotype by environment interaction for Holstein cattle populations using autoregressive and within- and across-country multi-trait reaction norms test-day models.

The progenies of international bulls in diverse climatic conditions and management levels may lead to different expressions of their genetic potential resulting in a re-ranking of these bulls. Therefore, evaluate the presence of genotype by environment interaction (G×E) within and across countries is important to guide the decision-making on alternative selection strategies. Thus, a two-step reaction norm (RN) approach was used to investigate the presence of G×E in Portuguese and Brazilian Holstein cattle. In step 1, we performed a within-country genetic evaluation using an autoregressive model to obtain precorrected phenotypes and environmental gradients (herd test-day solutions, HTD levels). In step 2, the precorrected phenotypes were considered as two distinct traits in a bi-trait RN model to estimate variance components across HTD levels, genetic correlation between HTD levels in Portugal and Brazil, and RN of the estimated breeding values. Additionally, the genetic correlation between countries using a bi-trait random regression (RR) sire model was obtained. In step 1, genetic additive variance for milk yield (MY) in Portugal was 14.1% higher than in Brazil. For somatic cell score (SCS), the genetic additive variance in Portugal was 12.7% lower than in Brazil. Although similar heritability estimates for SCS were observed in both countries, MY heritabilities were 0.31 for Portugal and 0.23 for Brazil. Genetic correlations (SD) between both countries obtained using RR sire model were 0.78 (0.051) for MY and 0.75 (0.062) for SCS. In step 2, MY genetic correlations among HTD levels within countries were higher than 0.94 for Portugal and 0.98 for Brazil. Somatic cell score genetic correlations among HTD levels ranged from 0.70 to 0.99 for Portugal and from 0.84 to 0.99 for Brazil. The average (SD) of genetic correlation estimates between Portuguese and Brazilian HTD levels were 0.74 (0.009) for MY and 0.57 (0.060) for SCS. These results suggest the presence of G×E for MY and SCS of Holstein cattle between both countries. Although there was no indication of G×E between Brazilian herd environments, the low genetic correlation for SCS indicates potential re-ranking of bulls between extreme environmental gradient in Portugal. Overall, the results of this study evidence the importance of national and international genetic evaluation systems to assist dairy farmers in the selection of the best genotypes to obtain the expected returns from investments in imported semen and to realize genetic progress in dairy populations under local environmental conditions.

Autoregressive single-step test-day model for genomic evaluations of Portuguese Holstein cattle.

The multiple-lactation autoregressive test-day (AR) model is the adopted model for the national genetic evaluation of dairy cattle in Portugal. Under this model, animals' permanent environment effects are assumed to follow a first-order autoregressive process over the long (auto-correlations between parities) and short (auto-correlations between test-days within lactation) terms. Given the relevance of genomic prediction in dairy cattle, it is essential to include marker information in national genetic evaluations. In this context, we aimed to evaluate the feasibility of applying the single-step genomic (G)BLUP to analyze milk yield using the AR model in Portuguese Holstein cattle. In total, 11,434,294 test-day records from the first 3 lactations collected between 1994 and 2017 and 1,071 genotyped bulls were used in this study. Rank correlations and differences in reliability among bulls were used to compare the performance of the traditional (A-AR) and single-step (H-AR) models. These 2 modeling approaches were also applied to reduced data sets with records truncated after 2012 (deleting daughters of tested bulls) to evaluate the predictive ability of the H-AR. Validation scenarios were proposed, taking into account young and proven bulls. Average EBV reliabilities, empirical reliabilities, and genetic trends predicted from the complete and reduced data sets were used to validate the genomic evaluation. Average EBV reliabilities for H-AR (A-AR) using the complete data set were 0.52 (0.16) and 0.72 (0.62) for genotyped bulls with no daughters and bulls with 1 to 9 daughters, respectively. These results showed an increase in EBV reliabilities of 0.10 to 0.36 when genomic information was included, corresponding to a reduction of up to 43% in prediction error variance. Considering the 3 validation scenarios, the inclusion of genomic information improved the average EBV reliability in the reduced data set, which ranged, on average, from 0.16 to 0.26, indicating an increase in the predictive ability. Similarly, empirical reliability increased by up to 0.08 between validation tests. The H-AR outperformed A-AR in terms of genetic trends when unproven genotyped bulls were included. The results suggest that the single-step GBLUP AR model is feasible and may be applied to national Portuguese genetic evaluations for milk yield.

Preventing maritime transport of pathogens: the remarkable antimicrobial properties of silver-supported catalysts for ship ballast water disinfection.

Ship ballast water (SBW) antimicrobial treatment is considered as a priority issue for the shipping industry. The present work investigates the possibility of utilizing antimicrobial catalysis as an effective method for the treatment of SBW. Taking into account the well-known antimicrobial properties of ionic silver (Ag+), five silver-supported catalysts (Ag/γ-Al2O3) with various loadings (0.05, 0.1, 0.2, 0.5, and 1 wt%) were prepared and examined for the antimicrobial treatment of SBW. The bactericidal activity of the aforementioned catalysts was investigated towards the inhibition of Escherichia coli (Gram-negative) and Escherichia faecalis (Gram-positive) bacteria. Catalytic experiments were conducted in a three-phase continuous flow stirred tank reactor, used in a semi-batch mode. It was found that using the catalyst with the lowest metal loading, the inhibition of E. coli reached 95.8% after 30 minutes of treatment of an E. coli bacterial solution, while the inhibition obtained for E. faecalis was 76.2% after 60 minutes of treatment of an E. faecalis bacterial solution. Even better results (100% inhibition after 5 min of reaction) were obtained using the catalysts with higher Ag loadings. The results of the present work indicate that the prepared monometallic catalysts exert their antimicrobial activity within a short period of time, revealing, for the first time ever, that the field of antimicrobial heterogeneous catalysis using deposited ionic silver on a solid support may prove decisive for the disinfection of SBW.

Influence of schooling and age on cognitive performance in healthy older adults.

Few studies have examined the influence of a low level of schooling on age-related cognitive decline in countries with wide social and economic inequalities by using the Cambridge Automated Neuropsychological Test Battery (CANTAB). The aim of the present study was to assess the influence of schooling on age-related cognitive decline using unbiased cognitive tests. CANTAB allows cognitive assessment across cultures and education levels with reduced interference of the examiner during data acquisition. Using two-way ANOVA, we assessed the influences of age and education on test scores of old adults (61-84 years of age). CANTAB tests included: Visual Sustained Attention, Reaction Time, Spatial Working Memory, Learning and Episodic Memory. All subjects had a minimum visual acuity of 20/30 (Snellen Test), no previous or current history of traumatic brain/head trauma, stroke, language impairment, chronic alcoholism, neurological diseases, memory problems or depressive symptoms, and normal scores on the Mini Mental State Examination (MMSE). Subjects were grouped according to education level (1 to 7 and ≥8 years of schooling) and age (60-69 and ≥70 years). Low schooling level was associated with significantly lower performance on visual sustained attention, learning and episodic memory, reaction time, and spatial working memory. Although reaction time was influenced by age, no significant results on post hoc analysis were detected. Our findings showed a significantly worse cognitive performance in volunteers with lower levels of schooling and suggested that formal education in early life must be included in the preventive public health agenda. In addition, we suggest that CANTAB may be useful to detect subtle cognitive changes in healthy aging.

Short communication: Improving accuracy of predicting breeding values in Brazilian Holstein population by adding data from Nordic and French Holstein populations.

The present study investigated the improvement of prediction reliabilities for 3 production traits in Brazilian Holsteins that had no genotype information by adding information from Nordic and French Holstein bulls that had genotypes. The estimated across-country genetic correlations (ranging from 0.604 to 0.726) indicated that an important genotype by environment interaction exists between Brazilian and Nordic (or Nordic and French) populations. Prediction reliabilities for Brazilian genotyped bulls were greatly increased by including data of Nordic and French bulls, and a 2-trait single-step genomic BLUP performed much better than the corresponding pedigree-based BLUP. However, only a minor improvement in prediction reliabilities was observed in nongenotyped Brazilian cows. The results indicate that although there is a large genotype by environment interaction, inclusion of a foreign reference population can improve accuracy of genetic evaluation for the Brazilian Holstein population. However, a Brazilian reference population is necessary to obtain a more accurate genomic evaluation.

Genetic parameters for test day somatic cell score in Brazilian Holstein cattle.

Selection for lower somatic cell count has been included in the breeding objectives of several countries in order to increase resistance to mastitis. Genetic parameters of somatic cell scores (SCS) were estimated from the first lactation test day records of Brazilian Holstein cows using random-regression models with Legendre polynomials (LP) of the order 3-5. Data consisted of 87,711 TD produced by 10,084 cows, sired by 619 bulls calved from 1993 to 2007. Heritability estimates varied from 0.06 to 0.14 and decreased from the beginning of the lactation up to 60 days in milk (DIM) and increased thereafter to the end of lactation. Genetic correlations between adjacent DIM were very high (>0.83) but decreased to negative values, obtained with LP of order four, between DIM in the extremes of lactation. Despite the favorable trend, genetic changes in SCS were not significant and did not differ among LP. There was little benefit of fitting an LP of an order >3 to model animal genetic and permanent environment effects for SCS. Estimates of variance components found in this study may be used for breeding value estimation for SCS and selection for mastitis resistance in Holstein cattle in Brazil.

Georeferenced evaluation of genetic breeding value patterns in Brazilian Holstein cattle.

The aim of this study was to analyze the relationship between environmental and genetic values for milk production and type traits in Holstein cattle in Brazil. The genetic value of 65,383 animals for milk production and 53,626 for type classification were available. Socioeconomic and environmental data were obtained from the Brazilian Institute of Geography and Statistics, the Food and Agriculture Organization of the United Nations, the National Aeronautics and Space Administration, and the National Institute of Meteorology. Five to six clusters were generated for each of the groups of type traits and production levels. The relationships between these traits were assessed using the STEPDISC, DISCRIM and CANDISC procedures in SAS(®). Traits within the clusters behaved differently, but, in general, animals with lower genetic values were found in environments that were more stressful for animal production. These differences were mainly associated with temperature, humidity, precipitation and the Normalized Difference Vegetative Index. Genetic values for milk production showed best discrimination between different environments, while type traits showed poor discrimination, possibly because farmers mainly select for milk production. Environmental variations for genetic values in dairy cattle in Brazil should be further examined.

A new antitumoral Heteroarylaminothieno[3,2-b]pyridine derivative: its incorporation into liposomes and interaction with proteins monitored by fluorescence.

The fluorescence properties of the new potent antitumoral methyl 3-amino-6-(benzo[d]thiazol-2-ylamino)thieno[3,2-b]pyridine-2-carboxylate in solution and when encapsulated in several different nanoliposome formulations were investigated. The compound exhibits very reasonable fluorescence quantum yields and a solvent sensitive emission in several polar and non-polar media, despite not being fluorescent in protic solvents. Fluorescence anisotropy measurements of the compound incorporated into liposomes revealed that this thienopyridine derivative can be carried in the hydrophobic region of the lipid membrane. Liposome formulations including this antitumor compound are nanometric in size, with a diameter lower than 130 nm and generally low polydispersity, and are promising for future drug delivery developments. The interaction of the compound with bovine serum albumin (BSA) and the multidrug resistance protein MDR1 was monitored by FRET, the compound acting as an energy acceptor. It was observed that the drug had a lower interaction with the MDR1 protein than with the native form of BSA, which is an important result regarding applications of this antitumoral drug.

Novel catalytic and mechanistic studies on wastewater denitrification with hydrogen.

The present work reports up-to-date information regarding the reaction mechanism of the catalytic hydrogenation of nitrates in water media. In the present mechanistic study, an attempt is made, for the first time, to elucidate the crucial role of several catalysts and reaction parameters in the mechanism of the NO(3)(-)/H(2) reaction. Steady-state isotopic transient kinetic analysis (SSITKA) experiments coupled with ex situ diffuse reflectance infrared Fourier transform spectroscopy (DRIFTS) were performed on supported Pd-Cu catalysts for the NO(3)(-)/H(2) and NO(3)(-)/H(2)/O(2) reactions. The latter experiments revealed that the formation and surface coverage of various adsorbed active intermediate N-species on the support or Pd/Cu metal surface is significantly favored in the presence of TiO(2) in the support mixture and in the presence of oxygen in the reaction's gaseous feed stream. The differences in the reactivity of these adsorbed N-species, found in the present work, adequately explain the large effect of the chemical composition of the support and the gas feed composition on catalyst behaviour (activity and selectivity). The present study leads to solid mechanistic evidence concerning the presence of a hydrogen spillover process from the metal to the support. Moreover, this study shows that Cu clusters are active sites for the reduction of nitrates to nitrites.

The effect of several parameters on catalytic denitrification of water by the use of H2 in the presence of O2 over metal supported catalysts.

The present paper involves a detailed study of the selective catalytic reduction of nitrates in aqueous mediums by the use of H2 in the presence of O2 over monometallic and bimetallic supported catalysts. In this study, an attempt has been made to improve the denitrification efficiency (XNO3(-), SN2) of several catalysts by regulating some experimental parameters that are involved in the process. Therefore, the effects of the type of reactor (semi-batch reactor vs continuous flow reactor), the nature of the active phase (Pd, Cu, and Pd-Cu) and the particle size of γ-Al2O3 spheres (particle diameter = 1.8 mm and 3 mm) on catalytic activity and reaction selectivity, as well as the adsorption capacity of γ-Al2O3 spheres for nitrates, were examined. As the review indicates, most of the research has so far been conducted on batch or semi-batch reactors. This study successfully demonstrates the benefits of using a continuous flow reactor in terms of catalytic activity (XNO3(-), %) and reaction selectivity (SN2, %). Another important aspect of this study is the crucial role of bimetallic Pd-Cu clusters for the prevention of NH4(+) formation. Moreover, the use of 1.8 mm diameter γ-Al2O3 spheres as a support was proved to significantly enhance the catalytic performance of bimetallic Pd-Cu catalysts towards nitrate reduction compared to 3 mm diameter γ-Al2O3 spheres. This difference may be attributed to mass (NO3(-), OH(-)) transfer effects (external mass transfer phenomena).

Isolation and characterization of the promoter sequence of a cassava gene coding for Pt2L4, a glutamic acid-rich protein differentially expressed in storage roots.

Cassava is one of the most important tropical food crops for more than 600 million people worldwide. Transgenic technologies can be useful for increasing its nutritional value and its resistance to viral diseases and insect pests. However, tissue-specific promoters that guarantee correct expression of transgenes would be necessary. We used inverse polymerase chain reaction to isolate a promoter sequence of the Mec1 gene coding for Pt2L4, a glutamic acid-rich protein differentially expressed in cassava storage roots. In silico analysis revealed putative cis-acting regulatory elements within this promoter sequence, including root-specific elements that may be required for its expression in vascular tissues. Transient expression experiments showed that the Mec1 promoter is functional, since this sequence was able to drive GUS expression in bean embryonic axes. Results from our computational analysis can serve as a guide for functional experiments to identify regions with tissue-specific Mec1 promoter activity. The DNA sequence that we identified is a new promoter that could be a candidate for genetic engineering of cassava roots.

Genetic parameters for test day milk yields of first lactation Holstein cows by random regression models.

Covariance components for test day milk yield using 263 390 first lactation records of 32 448 Holstein cows were estimated using random regression animal models by restricted maximum likelihood. Three functions were used to adjust the lactation curve: the five-parameter logarithmic Ali and Schaeffer function (AS), the three-parameter exponential Wilmink function in its standard form (W) and in a modified form (W*), by reducing the range of covariate, and the combination of Legendre polynomial and W (LEG+W). Heterogeneous residual variance (RV) for different classes (4 and 29) of days in milk was considered in adjusting the functions. Estimates of RV were quite similar, rating from 4.15 to 5.29 kg2. Heritability estimates for AS (0.29 to 0.42), LEG+W (0.28 to 0.42) and W* (0.33 to 0.40) were similar, but heritability estimates used W (0.25 to 0.65) were highest than those estimated by the other functions, particularly at the end of lactation. Genetic correlations between milk yield on consecutive test days were close to unity, but decreased as the interval between test days increased. The AS function with homogeneous RV model had the best fit among those evaluated.

Utilização dos polinômios de Legendre e da função de Wilmink em avaliações genéticas para persistência na lactação de animais da raça Holandesa / Use of Legendre polynomials and Wilmink function in genetic evaluations for persistency of lactation in Holstein cows

Os registros de produção de leite de 11.023 primeiras lactações de vacas da raça Holandesa pertencentes a 251 rebanhos distribuídos no estado de Minas Gerais foram usados para comparar os polinômios de Legendre e a função Wilmink em modelos de regressão aleatória (MRA) quanto aos seus efeitos na estimação de parâmetros genéticos e predição de valores genéticos para nove medidas de persistência na lactação e produção de leite até 305 dias. Os modelos de regressão aleatória ajustados aos controles leiteiros entre o sexto e o 305(0) dia de lactação incluíram o efeito de rebanho-ano-mês do controle, os parâmetros dos polinômios de Legendre de ordens 3 a 5 ou da função de Wilmink, para modelar as curvas fixas da regressão dentro das subclasses de idade-estação de parto da vaca e os parâmetros dos polinômios de Legendre de ordens 3 a 5, para modelar os efeitos aleatórios genético-aditivo e permanente de ambiente. Os testes do critério de informação de Akaike e Bayesiano indicaram o modelo com maior número de parâmetros como o que melhor se ajustou aos dados de produção de leite. Observaram-se grandes variações nas estimativas de herdabilidade para a maioria das medidas de persistência na lactação, com uso dos modelos que envolveram ajustes dos polinômios de Legendre. As estimativas de herdabilidade variaram de 0,11 a 0,33 para produção de leite ao longo da lactação, de 0,33 a 0,36 para a produção de leite até 305 dias e de 0,00 a 0,32 para persistência na lactação. As correlações genéticas entre persistência e produção de leite até 305 dias diferiram com o modelo e a medida de persistência. A utilização da função de Wilmink, comparada aos polinômios de Legendre, proporcionou mudanças expressivas na ordem dos animais quando classificados para persistência na lactação.

Records of 11,023 first-parity Holstein cows belonging to 251 herds in the State of Minas Gerais were used to compare the Legendre polynomials and Wilmink function in random regression models (RRM) as for their effects in the estimate of genetic parameters and prediction of breeding values for nine types of persistency measurements and 305-day milk yield. The random regression test day models included the effect of herd-year-month test day, parameters of the function of Wilmink or 3th to 5th order Legendre polynomials to model fixed curves of the subclasses and 3th to 5th order Legendre polynomials to model genetic and permanent environmental effects. The AkaikeÆs Information Criterion (AIC) and Bayesian Information Criterion (BIC) indicated the model with larger number of parameters as the one that best fitted the data of milk yield. Using the Legrendre polynomial model large variation was observed in the estimates heritabilities for most of the persistency measures. The estimates herdabilities varied from 0.11 to 0.33 to milk yield throughout the lactation, from 0.33 to 0.36 for the 305-day milk yield and, from 0.00 to 0.32 for persistency. Genetic correlations between persistency and 305-day milk yield differed according to the model and persistency measure. Compared the Legendre polynomials to the Wilmink function provided expressive changes in rank of animals for persistency of lactation.

Controles alternados das ordenhas da manhã e da tarde para estimação da produção de leite na lactação / Morning and afternoon tests for estimating lactation milk yield

Determinaram-se procedimentos para estimar produção diária de leite usando controles da manhã (AM) ou da tarde (PM) e comparar sistemas de controle para previsão da produção de leite em 305 dias usando várias combinações de controles AM e PM. Utilizaram-se 20.328 produções do dia de controle de 1.516 lactações de vacas ordenhadas duas vezes ao dia, em 96 rebanhos supervisionados pela Associação dos Criadores de Gado Holandês de Minas Gerais e registradas no período de 2000 a 2003. Sete procedimentos foram usados para estimação da produção diária. Correlações entre produções observada e estimada, médias e desvios-padrão das diferenças entre elas e desvios-padrão das produções estimadas foram os critérios para comparação de procedimentos. As estimativas obtidas com a ordenha da manhã foram mais acuradas do que as obtidas com as da ordenha da tarde. O procedimento em que se incluiu uma regressão para cada classe de intervalo de ordenhas e uma regressão sobre dias em lactação foi o selecionado para estimação da produção diária. Quatro sistemas para previsão da produção de leite em 305 dias foram comparados. Os sistemas com alternância mensal dos controles AM-PM apresentaram melhores resultados do que aqueles em que se utilizaram somente o controle AM ou somente PM. As correlações entre produção estimada e observada foram 0,99 e 0,97, respectivamente, para os primeiros e os últimos sistemas. Alternância dos controles AM-PM, iniciando-se com o controle AM, foi o sistema mais acurado de estimação.

Procedures to estimate daily yield from either morning (AM) or evening (PM) test weighings and to compare different systems of testing for accuracy of predicting 305-day milk yield using various combinations of AM and PM production records were determined. Data of 20,328 test-day records of 1,516 cows milked twice-a-day, from 96 Holstein Dairy Cattle Association herds in Minas Gerais State and recorded from 2000 to 2003. Seven procedures were used to estimate daily yields. Comparisons were made on the basis of correlations between true and estimated daily yields, average difference between the estimated and actual values and also the variances of differences. Morning weighings predicted daily yield more accurately than evening weighings. The procedure which included a regression for each milking interval class and a regression on days in milk were selected for estimation of daily yields. Four systems for predicting 305-day milk yield were compared. Alternating AM-PM testing systems on monthly frequency showed better results than testing always in the AM or always in the PM. Correlations between observed and estimated 305-day lactation yields were 0.99 and 0.97, respectively, for the first and later systems. Alternating AM-PM testing starting with an AM test was the most accurate system of estimation.

Understanding the synergistic catalytic effect between La(2)O(3) and CaO for the CH(4) lean De-NO(x) reaction: kinetic and mechanistic studies.

Doping of La(2)O(3) crystallites with Ca(2+) ions significantly enhances the intrinsic rate of NO reduction by CH(4) in the presence of 5% O(2) at 550 degrees C compared to pure La(2)O(3) and CaO solids, while the opposite is true after doping of CaO with La(3+) ions. It was found that the 5 wt % La(2)O(3)-95 wt % CaO system has one of the highest intrinsic site reactivities (TOF = 8.5 x 10(-3) s(-1)) reported at 550 degrees C for the NO/CH(4)/O(2) reaction among metal oxide surfaces. The doping process occurred after first dispersing La(2)O(3) and CaO crystallites in deionized water heated to 60 degrees C for 90 min, while the dried material was then ground and heated slowly in air to 800 degrees C and kept at this temperature for 5 h. The doping process had the effect of creating surface oxygen vacant sites (F-type defects) in the oxide lattices the concentration of which is a function of the wt % La(2)O(3) used in the mixed oxide system as revealed by photoluminescence and O(2) chemisorption studies. According to DRIFTS (15)NO transient isotopic experiments (SSITKA), oxygen vacant sites in Ca(2+)-doped La(2)O(3) promote the formation of a more active chemisorbed NO(x) species (NO(2)(-)) that contributes to the enhancement of reaction rate as compared to pure lanthana, calcium oxide, and La(3+)-doped CaO. These results were supported by the kinetic orders of the reaction with respect to NO and O(2) obtained as a function of wt % La(2)O(3) content in the mixed oxide system. Carbon dioxide (a reaction product) competes for the same oxygen vacant sites to form stable adsorbed carbonate-like species, thus lowering the reduction rate of NO. The dependence of the reaction TOF on the wt % La(2)O(3) loading at 550 degrees C was found to follow the trend of the dependence of photoluminescence intensity on the wt % La(2)O(3) content in the La(2)O(3)-CaO oxide system.

Genotype x environment interaction for age at first calving in Brazilian and Colombian Holsteins.

The objective was to determine whether there is a genotype x environment interaction for age at first calving (AFC) in Holstein cattle in Brazil and Colombia. Data included 51,239 and 25,569 first-lactation records from Brazil and Colombia, respectively. Of 4230 sires in the data, 530 were North American sires used in both countries. Analyses were done using the REML bi-trait animal model, and AFC was considered as a distinct characteristic in each country. Fixed effects of contemporary group (herd-calving year), sire genetic group, and cow genetic group, and random effects of animal and residual variation were included in the model. Average AFC in Brazil and Colombia were 29.5 +/- 4.0 and 32.1 +/- 3.5 mo, respectively. Additive and residual genetic components and heritability coefficient for AFC in Brazil were 2.21 mo2, 9.41 mo2, and 0.19, respectively, whereas for Colombia, they were 1.02 mo2, 6.84 mo2, and 0.13, respectively. The genetic correlation of AFC between Brazil and Colombia was 0.78, indicating differences in ranking of sires consistent with a genotype x environment interaction. Therefore, in countries with differing environments, progeny of Holstein sires may calve at relatively younger or older ages compared with contemporary herdmates in one environment versus another.

Factors that cause genotype by environment interaction and use of a multiple-trait herd-cluster model for milk yield of Holstein cattle from Brazil and Colombia.

Descriptive herd variables (DVHE) were used to explain genotype by environment interactions (G x E) for milk yield (MY) in Brazilian and Colombian production environments and to develop a herd-cluster model to estimate covariance components and genetic parameters for each herd environment group. Data consisted of 180,522 lactation records of 94,558 Holstein cows from 937 Brazilian and 400 Colombian herds. Herds in both countries were jointly grouped in thirds according to 8 DVHE: production level, phenotypic variability, age at first calving, calving interval, percentage of imported semen, lactation length, and herd size. For each DVHE, REML bivariate animal model analyses were used to estimate genetic correlations for MY between upper and lower thirds of the data. Based on estimates of genetic correlations, weights were assigned to each DVHE to group herds in a cluster analysis using the FASTCLUS procedure in SAS. Three clusters were defined, and genetic and residual variance components were heterogeneous among herd clusters. Estimates of heritability in clusters 1 and 3 were 0.28 and 0.29, respectively, but the estimate was larger (0.39) in Cluster 2. The genetic correlations of MY from different clusters ranged from 0.89 to 0.97. The herd-cluster model based on DVHE properly takes into account G x E by grouping similar environments accordingly and seems to be an alternative to simply considering country borders to distinguish between environments.

Estudo dos efeitos de ambiente sobre as características lineares de tipo em rebanhos bovinos da raça Holandesa / Study of environmental effects on linear type traits in Brazilian Holstein

Efeitos de estádio da lactação, idade à classificação e grupo contemporâneo de rebanho, ano e estação de classificação foram considerados nas análises de 21 características lineares de tipo e pontuação final de 2.122 animais da raça Holandesa, filhos de 178 reprodutores e nascidos em 83 rebanhos. Utilizou-se o método dos quadrados mínimos nas análises de variância das características. O efeito de estádio da lactação teve influência sobre as características do sistema mamário, evidenciando que houve alterações morfológicas durante o período de lactação para todas as características de úbere, exceto inserção do úbere anterior, textura do úbere e comprimento dos tetos. Dentre as características de conformação/capacidade corporal, profundidade corporal foi a mais influenciada pelo estádio da lactação, seguida do tamanho corporal, largura torácica e força lombar. Para todas as características de conformação/capacidade corporal o efeito da idade à classificação revelou-se altamente significativo. Dentre as características lineares da categoria pernas/pés, a variável idade à classificação foi importante (P<0,05) apenas para vista lateral das pernas. O efeito de idade sobre as características de garupa variou consideravelmente, sendo importante apenas para largura (P<0,01). Pontuação final e angulosidade também foram influenciadas (P<0,01) pelo efeito da idade. A verificação de significância estatística indicou a existência de componentes de meio e evidenciou a importância do estudo desses componentes.

Correlações genéticas e fenotípicas entre características de tipo e produção de leite em bovinos da raça Holandesa / Genetic and phenotypic correlations between type traits and milk production in Holstein cattle

Correlações genéticas e fenotípicas entre 21 características lineares de tipo e produção de leite em até 305 dias de lactação foram estimadas pela máxima verossimilhança restrita sob modelo animal, a partir de dados da Associação de Criadores de Gado Holandês de Minas Gerais. Nas análises das características lineares, os efeitos fixos utilizados no modelo incluíram estádio da lactação, idade do animal, grupo contemporâneo de rebanho, ano e estação de classificação, e o efeito aleatório do pai da vaca. As características lineares que apresentaram maiores correlações genéticas com produção de leite foram largura do úbere posterior (0,60) e largura de garupa (0,37), indicando não haver antagonismo genético entre a seleção para essas características e a produção de leite. As correlações fenotípicas entre características lineares de tipo e produção de leite foram, em geral, menores do que as correlações genéticas correspondentes. As correlações fenotípicas entre as características lineares apresentaram-se altas dentro das seções de conformação/capacidade e de sistema mamário. Correlações genéticas entre algumas características lineares foram altas, possibilitando a exclusão de algumas delas do programa de classificação linear adotado para a raça Holandesa no Brasil.

Genetic analysis of Holstein cattle populations in Brazil and the United States.

Genetic relationships between Brazilian and US Holstein cattle populations were studied using first-lactation records of 305-d mature equivalent (ME) yields of milk and fat of daughters of 705 sires in Brazil and 701 sires in the United States, 358 of which had progeny in both countries. Components of(co)variance and genetic parameters were estimated from all data and from within herd-year standard deviation for milk (HYSD) data files using bivariate and multivariate sire models and DFREML procedures distinguishing the two countries. Sire (residual) variances from all data for milk yield were 51 to 59% (58 to 101%) as large in Brazil as those obtained from half-sisters in the average US herd. Corresponding proportions of the US variance in fat yield that were found in Brazil were 30 to 41% for the sire component of variance and 48 to 80% for the residual. Heritabilities for milk and fat yields from multivariate analysis of all the data were 0.25 and 0.22 in Brazil, and 0.34 and 0.35 in the United States. Genetic correlations between milk and fat were 0.79 in Brazil and 0.62 in the United States. Genetic correlations between countries were 0.85 for milk, 0.88 for fat, 0.55 for milk in Brazil and fat in the US, and 0.67 for fat in Brazil and milk in the United States. Correlated responses in Brazil from sire selection based on the US information increased with average HYSD in Brazil. Largest daughter yield response was predicted from information from half-sisters in low HYSD US herds (0.75 kg/kg for milk; 0.63 kg/kg for fat), which was 14% to 17% greater than estimates from all US herds because the scaling effects were less severe from heterogeneous variances. Unequal daughter response from unequal genetic (co)variances under restrictive Brazilian conditions is evidence for the interaction of genotype and environment. The smaller and variable yield expectations of daughters of US sires in Brazilian environments suggest the need for specific genetic improvement strategies in Brazilian Holstein herds. A US data file restricting daughter information to low HYSD US environments would be a wise choice for across-country evaluation. Procedures to incorporate such foreign evaluations should be explored to improve the accuracy of genetic evaluations for the Brazilian Holstein population.