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1.
Heliyon ; 9(12): e22964, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-38076107

RESUMO

Unknown to many, the Philippines is host to a few remaining accessions of the underutilised and understudied cereal foxtail millet (Setaria italica (L.) P. Beauv.). We collected together accessions of this crop from different eco-geographical locations within the Philippines, along with a few accessions from Lanyu, Taiwan, to undertake a study of their nutritional value and genetic diversity. All accessions were field-grown in 2022, dry season (DS) at the Institute of Plant Breeding (IPB) Experiment Station, Los Baños, Laguna, Philippines. The accessions were tested for micronutrients, including Zn and Fe, nitrogen as a proxy for protein, ß-carotene, phytic acid, and a number of phenolic compounds with known nutritional potential. Of the 20 accessions tested, the accessions Bayaras and GB61438 had the highest level of Zn (107.1 mg/kg) and Fe (70.52 mg/kg), respectively, higher than levels found in traditional rice varieties. For ß-carotene the highest concentration was found in the accession Balles (∼10 µg/g). Twelve phenolic compounds were detected, with catechin, syringic acid, ferulic acid and kaempferol having the highest concentrations. To assess the genetic diversity, we sequenced a set of eight samples selected from among the accessions to a depth of at least 25-fold using whole-genome re-sequencing. Analysis of the population structure, using genome-wide, high-quality SNPs, showed modest diversity among the accessions, with two unadmixed groups. The accessions are monophyletic relative to their earliest common ancestor, with the very light brown accessions emerging earlier than the light brown and reddish-brown varieties. Analysis of zinc-regulated, iron-regulated transporter-like protein (ZIP) transporters within the foxtail millet reference sequence, var. Yugu1 identified 17 putative ZIP transporters. Variant calling identified SNPs primarily within 3' and 5' regions, and introns, indicating variation between foxtail millet accessions within regulatory gene regions rather than in structural proteins. The local foxtail millet accessions, therefore, represent a potential alternative source of nutrients which may help in addressing malnutrition in the Philippines.

2.
PLoS One ; 16(9): e0256342, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34469437

RESUMO

Climate change is projected to increase the incidence of severe drought in many regions, potentially requiring selection for different traits in crop species to maintain productivity under water stress. In this study, we identified a suite of hydraulic traits associated with high productivity under water stress in four genotypes of S. melongena L. We also assessed the potential for recovery of this suite of traits from drought stress after re-watering. We observed that two genotypes, PHL 4841 and PHL 2778, quickly grew into large plants with smaller, thicker leaves and increasingly poor hydraulic status (a water-spender strategy), whereas PHL 2789 and Mara maintained safer water status and larger leaves but sacrificed large gains in biomass (a water-saver strategy). The best performing genotype under water stress, PHL 2778, additionally showed a significant increase in root biomass allocation relative to other genotypes. Biomass traits of all genotypes were negatively impacted by water deficit and remained impaired after a week of recovery; however, physiological traits such as electron transport capacity of photosystem II, and proportional allocation to root biomass and fine root length, and leaf area recovered after one week, indicating a strong capacity for eggplant to rebound from short-term deficits via recovery of physiological activity and allocation to resource acquiring tissues. These traits should be considered in selection and breeding of eggplant hybrids for future agricultural outlooks.


Assuntos
Aclimatação/genética , Secas , Melhoramento Vegetal , Solanum melongena/fisiologia , Desidratação/genética , Genótipo , Folhas de Planta/fisiologia , Raízes de Plantas/fisiologia , Estações do Ano , Água/metabolismo
3.
Plants (Basel) ; 9(5)2020 May 23.
Artigo em Inglês | MEDLINE | ID: mdl-32456149

RESUMO

Drought during the formative stages of a plant's growth triggers a sequence of responses to maintain optimal growing conditions, but often at the expense of crop productivity. Two field experiments were conducted to determine the effect of drought on 10 high-yielding sugarcane genotypes at two formative stages (the tillering stage (TS) and stalk elongation (SS)), within 30 days after treatment imposition. The experiments followed a split-plot in a randomized complete block design with three replicates per genotype. Agro-physiological responses to drought were observed to compare the differences in the response of sugarcane during the two formative stages. Drought significantly reduced total chlorophyll content (Chl) and stomatal conductance (Gs) for both formative stages, while significantly increasing total scavenging activity (AOA) and electrolyte leakage (EC). A higher level of Chl was observed in the stalk elongation stage compared to the tillering stage; however, lower AOA coupled with higher EC in the stalk elongation stage suggests higher drought susceptibility. Pearson's correlation analysis revealed a stronger correlation between plant height, internode length, Chl, AOA, EC, and Gs at the tillering stage relative to the stalk elongation stage. Moreover, results from the multivariate analysis indicate the different contribution values of each parameter, supplementing the hypothesized difference in response between the two formative stages. Multivariate analysis clustered the 10 genotypes into groups based on the traits evaluated, suggesting the ability of these traits to detect differences in a sample population. The observed relationship among traits during the two formative stages of sugarcane will be significant in screening and identifying drought-susceptible and drought-tolerant genotypes for variety development studies.

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