Soil degradation index developed by multitemporal remote sensing images, climate variables, terrain and soil atributes.

Studies on soil degradation are essential for environmental preservation. Since almost 30% of the global soils are degraded, it is important to study and map them for improving their management and use. We aimed to obtain a Soil Degradation Index (SDI) based on multi-temporal satellite images associated with climate variables, land use, terrain and soil attributes. The study was conducted in a 2598 km2 area in São Paulo State, Brazil, where 1562 soil samples (0-20 cm) were collected and analyzed by conventional methods. Spatial predictions of soil attributes such as clay, cation exchange capacity (CEC) and soil organic matter (OM) were performed using machine learning algorithms. A collection of 35-year Landsat images was used to obtain a multi-temporal bare soil image, whose spectral bands were used as soil attributes predictors. The maps of clay, CEC, climate variables, terrain attributes and land use were overlaid and the K-means clustering algorithm was applied to obtain five groups, which represented levels of soil degradation (classes from 1 to 5 representing very low to very high soil degradation). The SDI was validated using the predicted map of OM. The highest degradation level obtained in 15% of the area had the lowest OM content. Levels 1 and 4 of SDI were the most representative covering 24% and 23% of the area, respectively. Therefore, satellite images combined with environmental information significantly contributed to the SDI development, which supports decision-making on land use planning and management.

Chitinase production by Trichoderma koningiopsis UFSMQ40 using solid state fermentation.

The chitinases have extensive biotechnological potential but have been little exploited commercially due to the low number of good chitinolytic microorganisms. The purpose of this study was to identify a chitinolytic fungal and optimize its production using solid state fermentation (SSF) and agroindustry substrate, to evaluate different chitin sources for chitinase production, to evaluate different solvents for the extraction of enzymes produced during fermentation process, and to determine the nematicide effect of enzymatic extract and biological control of Meloidogyne javanica and Meloidogyne incognita nematodes. The fungus was previously isolated from bedbugs of Tibraca limbativentris Stal (Hemiptera: Pentatomidae) and selected among 51 isolated fungal as the largest producer of chitinolytic enzymes in SSF. The isolate UFSMQ40 has been identified as Trichoderma koningiopsis by the amplification of tef1 gene fragments. The greatest chitinase production (10.76 U gds-1) occurred with wheat bran substrate at 55% moisture, 15% colloidal chitin, 100% of corn steep liquor, and two discs of inoculum at 30 °C for 72 h. Considering the enzymatic inducers, the best chitinase production by the isolated fungus was achieved using chitin in colloidal, powder, and flakes. The usage of 1:15 g/mL of sodium citrate-phosphate buffer was the best ratio for chitinase extraction of SSF. The Trichoderma koningiopsis UFSMQ40 showed high mortality of M. javanica and M. incognita when applied to treatments with enzymatic filtrated and the suspension of conidia.

When does stratification of a subtropical soil spectral library improve predictions of soil organic carbon content?

More accurate models for the prediction of soil organic carbon (SOC) by visible-near-infrared (Vis-NIR) spectroscopy remains a challenging task, especially when the soil spectral libraries (SSL) is composed of soils with a high pedological variation. One proposition to increase the models accuracy is to reduce the SSL variance, which can be achieved by stratifying the library into sub-libraries. Thus, the main objective of this study was to evaluate whether the stratification of a SSL by environmental, pedological and Vis-NIR spectral criteria results in greater accuracy of spectroscopic models than to general models for prediction of SOC content. The performance of the models was evaluated considering the variance of soil components and sample number. In addition, we tested the effect of two spectral preprocessing techniques and two multivariate calibration methods on spectroscopic modeling. For these purposes, a SSL composed of 2471 samples from Southern Brazil was stratified based on i) physiographic region; ii) land-use/land-cover; iii) soil texture, and iv) spectral class. Two spectral processing techniques: Savitzky-Golay - 1st derivative (SGD) and continuum removed reflectance (CRR) and two multivariate methods (partial least squares regression - PLSR and Cubist) were used to fit the models. The best performances for the global and local models were achieved with the CRR spectral processing associated with the Cubist method. The stratification of the SSL in more homogeneous sample groups by environmental criteria (physiographic regions and land-use/land-cover) improved the accuracy of SOC predictions compared to pedological (soil texture) and Vis-NIR spectral (spectral classes) criteria. The reduction in the number of samples negatively affected the performance of models for sub-libraries with high pedological and spectral variation. Stratification criteria were proposed in a flowchart to assist in decision making in future studies. Our findings suggest the importance of sample balance across environmental, pedological and spectral strata, in order to optimize SOC predictions.

Bare Earth's Surface Spectra as a Proxy for Soil Resource Monitoring.

The Earth's surface dynamics provide essential information for guiding environmental and agricultural policies. Uncovered and unprotected surfaces experience several undesirable effects, which can affect soil ecosystem functions. We developed a technique to identify global bare surface areas and their dynamics based on multitemporal remote sensing images to aid the spatiotemporal evaluation of anthropic and natural phenomena. The bare Earth's surface and its changes were recognized by Landsat image processing over a time range of 30 years using the Google Earth Engine platform. Two additional products were obtained with a similar technique: a) Earth's bare surface frequency, which represents where and how many times a single pixel was detected as bare surface, based on Landsat series, and b) Earth's bare soil tendency, which represents the tendency of bare surface to increase or decrease. This technique enabled the retrieval of bare surfaces on 32% of Earth's total land area and on 95% of land when considering only agricultural areas. From a multitemporal perspective, the technique found a 2.8% increase in bare surfaces during the period on a global scale. However, the rate of soil exposure decreased by ~4.8% in the same period. The increase in bare surfaces shows that agricultural areas are increasing worldwide. The decreasing rate of soil exposure indicates that, unlike popular opinion, more soils have been covered due to the adoption of conservation agriculture practices, which may reduce soil degradation.

Prediction of soil organic matter and clay contents by near-infrared spectroscopy - NIRS / Predição dos teores de matéria orgânica e argila do solo por espectroscopia no infravermelho próximo - NIRS

ABSTRACT: Among the soil constituents, special attention is given to soil organic matter (SOM) and clay contents, since, among other aspects, they are key factors to nutrient retention and soil aggregates formation, which directly affect the crop production potential. The methods commonly used for the quantification of these constituents have some disadvantages, such as the use of chemical reactants and waste generation. An alternative to these methods is the near-infrared spectroscopy (NIRS) technique. The aim of this research is to evaluate models for SOM and clay quantification in soil samples using spectral data by NIRS. A set (n = 400) of soil samples previously analyzed by traditional methods were used to generate a NIRS calibration curve. The clay content was determined by the hydrometer method while SOM content was determined by sulfochromic solution. For calibration, we used the original spectra (absorbance) and spectral pretreatment (Savitzky-Golay smoothing derivative) in the following models: multiple linear regression (MLR), partial last squares regression (PLSR), support vector machine (SVM) and Gaussian process regression (GPR). The curve validation was performed with the SVM model (best performance in the calibration based on R² and RMSE) in two ways: with 40 random samples from the calibration set and another set with 200 new unknown samples. The soil clay content affects the predictive ability of the calibration curve to estimate SOM content by NIRS. Validation curves showed poorer performance (lower R² and higher RMSE) when generated from unknown samples, where the model tends to overestimate the lower levels and to underestimate the higher levels of clay and SOM. Despite the potential of NIRS technique to predict these attributes, further calibration studies are still needed to use this technique in soil analysis laboratories.

RESUMO: Dentre os constituintes do solo, especial atenção é voltada aos teores de argila e de matéria orgânica do solo (MOS), pois, entre outros aspectos, são determinantes para retenção de nutrientes e a formação de agregados no solo, os quais afetam diretamente o potencial produtivo das culturas. Os métodos mais comumente utilizados para quantificação destes constituintes apresentam algumas desvantagens, como o uso de reagentes químicos e a geração de resíduos. Uma alternativa a estes métodos é o uso da espectroscopia no infravermelho próximo (near infrared spectroscopy - NIRS). O objetivo deste trabalho é avaliar modelos de quantificação dos teores de argila e de MOS em amostras de solo utilizando dados espectrais por meio da técnica NIRS. Foram utilizadas 400 amostras de solos com amplitude nos teores de MOS e argila para geração de uma curva de calibração. A argila foi determinada pelo método do densímetro e a MOS por meio da solução sulfocrômica. Para calibração, utilizou-se os espectros originais (absorbância) e com pré-tratamento espectral (Savitzky-Golay derivative) das 400 amostras nos seguintes modelos: multiple linear regression (MLR), partial last squares regression (PLSR), support vector machine (SVM) e Gaussian process regression (GPR). A validação da curva foi realizada com o modelo que apresentou melhor desempenho na calibração (SVM) de duas maneiras: com 40 amostras aleatórias oriundas daquelas utilizadas na calibração e com outras 200 novas amostras desconhecidas. O teor de argila das amostras de solo afeta a capacidade preditiva da curva de calibração da estimativa do teor de MOS pelo NIRS. A validação das curvas apresentou pior desempenho (menor R² e maior RMSE) quando feita a partir de amostras desconhecidas, cujo modelo tende a superestimar os teores mais baixos e subestimar os teores mais elevados de argila e MOS com a curva gerada. Apesar do potencial de predição destes atributos via NIRS, outros estudos de calibração ainda são necessários para que esta técnica possa ser utilizada em laboratórios de análises de solos.