Review: Genetic selection of high-yielding dairy cattle toward sustainable farming systems in a rapidly changing world.

The massive improvement in food production, as a result of effective genetic selection combined with advancements in farming practices, has been one of the greatest achievements of modern agriculture. For instance, the dairy cattle industry has more than doubled milk production over the past five decades, while the total number of cows has been reduced dramatically. This was achieved mainly through the intensification of production systems, direct genetic selection for milk yield and a limited number of related traits, and the use of modern technologies (e.g., artificial insemination and genomic selection). Despite the great betterment in production efficiency, strong drawbacks have occurred along the way. First, across-breed genetic diversity reduced dramatically, with the worldwide use of few common dairy breeds, as well as a substantial reduction in within-breed genetic diversity. Intensive selection for milk yield has also resulted in unfavorable genetic responses for traits related to fertility, health, longevity, and environmental sensitivity. Moving forward, the dairy industry needs to continue refining the current selection indexes and breeding goals to put greater emphasis on traits related to animal welfare, health, longevity, environmental efficiency (e.g., methane emission and feed efficiency), and overall resilience. This needs to be done through the definition of criteria (traits) that (a) represent well the biological mechanisms underlying the respective phenotypes, (b) are heritable, and (c) can be cost-effectively measured in a large number of animals and as early in life as possible. The long-term sustainability of the dairy cattle industry will also require diversification of production systems, with greater investments in the development of genetic resources that are resilient to perturbations occurring in specific farming systems with lesser control over the environment (e.g., organic, agroecological, and pasture-based, mountain-grazing farming systems). The conservation, genetic improvement, and use of local breeds should be integrated into the modern dairy cattle industry and greater care should be taken to avoid further genetic diversity losses in dairy cattle populations. In this review, we acknowledge the genetic progress achieved in high-yielding dairy cattle, closely related to dairy farm intensification, that reaches its limits. We discuss key points that need to be addressed toward the development of a robust and long-term sustainable dairy industry that maximize animal welfare (fundamental needs of individual animals and positive welfare) and productive efficiency, while also minimizing the environmental footprint, inputs required, and sensitivity to external factors.

Does body growth impair immune function in a large herbivore?

According to the principle of allocation, trade-offs are inevitable when resources allocated to one biological function are no longer available for other functions. Growth, and to a lesser extent, immunity are energetically costly functions that may compete with allocation to reproductive success and survival. However, whether high allocation to growth impairs immune system development during the growing period or immune system performance during adulthood is currently unknown in wild mammals. Using three roe deer (Capreolus capreolus) populations experiencing contrasting environmental conditions, we tested for potential costs of growth on immune phenotype over both the short-term (during growth), and the long-term (during adulthood) over the course of an individuals' life. We investigated potential costs on a set of 12 immune traits that reflect both innate and adaptive responses, and compared them between sexes and populations. Although fast growth tended to be associated with low levels of some humoral traits (globulins) during the growing period and some cellular immune traits (i.e. eosinophil and neutrophil counts) during adulthood, evidence for a trade-off between growth and other immune components was limited. Unexpectedly, no detectable growth costs on immunity were found in females from the population experiencing the least favourable environment. We discuss our findings in the light of the complex interplay between resource allocation strategies among reproduction, maintenance and immunity, in relation to local environmental conditions experienced by roe deer.

Effects of the level of early productivity on the lifespan of ewes in contrasting flock environments.

Selection for high levels of prolificacy has allowed substantial improvements in the production efficiency of New Zealand (NZ) sheep farms, but the consequences on ewe lifetime performance are mostly unknown. In this study, the relationship between the level of prolificacy early in ewes' productive lives and their probability to survive later (i.e. stayability) was evaluated in two contrasting NZ flock environments. Records were obtained from 6605 ewes from four ram breeder flocks representing either a moderate (n=2) or a highly variable (n=2) nutritional environment. All ewes lambed for the first time at 2 years of age and were mated the following year. The number of lambs born during the first 2 years of productive life (NLB2-3) was used as a measure of early prolificacy. Effects of NLB2-3 on stayability to 4, 5, 6, 7 and 8 years old were analysed using logistic regression. Curvilinear effects (logit-transformed) were detected (P<0.05) until stayability to 6 years and to 8 years old in the highly variable and the moderate environment, respectively. The NLB2-3 that resulted in maximum expected stayability to various ages was 3.9 to 4.2, and 4.5 to 4.7 lambs in the highly variable and in the moderate flock environments, respectively. In addition, ewe stayability was reduced when the proportion of the litter that survived from birth to weaning (i.e. ewe rearing ability) was submaximal during the early productive life. High prolific ewes had a low rearing ability whatever the environment whereas the rearing ability of lowly prolific ewes was apparently more sensitive to the nutritional environment. The poor maternal performance of ewes with low levels of NLB2-3 led to a premature culling by breeders whereas the high early reproductive effort associated with high levels of NLB2-3 seemed to be at the cost of ewes' survival, even in the moderate flock environment. In conclusion, the flock environment influenced the level of early prolificacy beyond which ewe longevity was reduced. It is suggested that further selection for high and early prolificacy in NZ flocks is likely to impair ewes' lifetime productivity.

Synergy between selection for production and longevity and the use of extended lactation: insights from a resource allocation model in a dairy goat herd.

Although most of the genetic progress in production efficiency is achieved through selection at a global scale, locally, farm managers can also influence the selection process to better match genotypes and their varying herd environment. This study focused on the influence of a particular management decision--the use of extended lactation (EL) in dairy goat production systems--as it affects the survival and reproduction rates at the herd level, which may then shape different long-term selection responses. The objective was to understand and quantify the influences of EL and variability in achieved intake level on the responses to selection for production, reproduction, and longevity. An animal model of resource allocation between life functions was applied to the dairy goat. It predicts the trajectory of change in the herd genetic composition as affected by the feeding level and the selection pressure applied by the manager. During 40 yr, goats were selected for milk yield, reproduction, and, with a different selection weight for age (WAGE), for longevity. Under varying achieved intake levels, increasing WAGE improved the survival rate but a nonlinear effect was observed for the average milk yield and BCS. When moderately increasing WAGE from 0, resources were reallocated from lactation towards body reserves and survival, which led to a trade-off at the herd level between improving survival and BCS and increasing milk yield. When further increasing WAGE, old females became systematically preferred regardless of their reproductive status and the proportion of EL in the herd increased. Females undergoing EL had reduced energetic costs of reproduction, which improved their probability of survival. Across generations, an increased herd incidence of EL led to a relaxation of the selection pressure on the resource allocation to body reserves, which is normally imposed by the manager's priority to achieve successful reproduction at each mating. As selection for longevity progressed, the incidence of high-producing females increased within the herd, driving a long-term trend in increased milk production. Thus, the use of EL as a management tool led to an alleviation of the trade-off between milk yield progress and survival improvement. Although the model simplifies the underlying physiology of nutrient allocation, it provides insights into how farm manager strategies can influence the development of genotype × environment interactions and promote herd robustness.

Characterization of a changing relationship between milk production and liveweight for dairy goats undergoing extended lactation.

This study aimed to characterize the time-profile of extended lactation (EL) for dairy goats, and the relationships between milk production, liveweight, and intake that are associated with this profile. For this, 20 nonpregnant multiparous dairy goats were monitored daily for about 90 d from the onset of EL [i.e., when an increase in milk yield (MY) was observed]. These 20 individual profiles were pooled to create a group average profile at the onset of EL for the purpose of parameterizing a simple compartmental model. Moreover, 9 of the 20 EL goats were kept to compare their 24-mo profiles of body weight and milk production with those observed during 2 successive normal lactations (NL). Despite being kept in the same environment and on the same feed, a clear change from decreasing to increasing MY was identified (time of change, Tchange) for all of the 20 EL goats around 330 d in milk. During the whole 24-mo period, EL goats produced as much milk as NL goats but this total milk production was unequally split before (56%) and after (44%) Tchange. In terms of body weight, the most striking difference between EL and NL goats was the rapid and very high increase (+9.3 kg with an average daily gain of 60.4 g/d) that was observed concurrently with the increase in MY. Model parameterization with the group average profile does not support that the rise in MY drives the increase in resource acquisition as is generally assumed at the onset of an NL. Rather, it demonstrates that the transfer of energy from feed to milk is delayed at the onset of EL. Moreover, assessing the model ability to fit the range of individual profiles showed that the performances over the first 90 d of EL are largely predetermined by the animal state at Tchange. The analysis of individual variability in EL efficiency showed that it depends both on an increase in resource acquisition and on the potential of goats to partition energy from the diet toward milk production instead of to body tissue gain. Finally, predicting the suitability for EL requires the consideration of more than just milk production for 300 d in milk.